Fatl038374.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- -
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000006.1:45365840-45368059[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-11 1.9e-08 36.2 0.2 2 38 19 55 18 60 0.91
Sequence Information
- Coding Sequence
- ATgccgaaatttaaaaaaaaaaaaaaggaagGTGAACGTCGAGGGGAGTGGTTAGAAGAAGGTATGAAGGCTGCAGTGGCGGCCGTAATAGGAAATGAAATGTCTGAAAGAGCTGCGTCTAAAAGATACAATGTCCCACGAAGCACGTTGCAAAGAAGGGTGAAGGCTATATCTAATCAACAGGAAGTGGATATGAAGCCTCAGCTAGGCCACTTTAAAGCTACTTTCaatgatttttatgaaaatcaatTAGTCGAACATATGAAAGATTTAGATTCCCGGTTGATGCCCTTGTCAAAACATGAATTCTTGAAGCTCGCTTATGATCTTGcagaaagtttaaaaattgacCATCGTTTTAATAGAGAGAAAAAAATGGCTGGCAAAGACTTTTATGAAAGCTTTATGAGTAGGCATCTAGAACTCAGCTACAGAAAACCACAATCAACCAGTTTGATGCGTTGTGTTGGTTTCAATAAGCCACaggtttacagattttttgatcaattagaatttttgattggaAAACATAAGTTTCGCCCATCAAGAATTTTCAACGGGGATGAAACAGGAGTTACATGCGTTCACGAGAATGATAAGGTGATAACCGTGAAAGGAAAGCGCCAAGTTGGTAAAGTGACGTCTGCGGAAAGGGGTCGTAATGTCACGCTGATGTTTTGTATGAGCGCTACTGGACAGTTTATTCCCCCGATTTTTATTTTCCCCAGGAAAAGAATGAATGACCGCTTAATGATTGGAGCACCTACTGAGAGTATTAGCTTCCCGACTCCAAATGGATGGATGACGACAGACTCATTCATGAAATGGTTTCAGCACTTTGTGTCATTCACAAAGCCCACAATGGATGATTCAGTCCTACTCATTTTAGATGGGCATAGTAGCCACAAGGACCTCGAAGTCATTTTGTATGCTCGTGAGAACCATGTCCACATGCTGAGCTTTCCCCCACACACGAGTCACAAGCTTCAGCCCCTTGATAGAACATTTATGAAACCgttcaagaactgttacaatgCCGCTTGCTCTTTGTGGATGAGGGCCAATCCAGGGGCCAGAATAAACGACTACGACATCGCCAAATTAGTGGCTGATGCTTACAAGCAAGTCTGTCGTTTGGATATTGCTGAGAATGGATTCAAGTGCACTGGAATTTATCCAACAAATCGAAACATATTCAACGACATAGATTTCATGAGCAGTGAGATAACAAACATTCCAATCCAGGCACAACCAAGCACAGCCTCTACTACAATTCCTGCATCCGACCAGCCATCTTCTGGTTCAACGACACCAGCAGCTGAGCTGTCCGCTTCCACTTCATTGGACCAAACTACAATGCCAGCATCTGCCCAGCTGGATCCTGCTTCCTCAAGGACACAAGCAGCTGAGCTGTCCGCTTCCACTTCGGTAGTCCAACCTGCAATCCCTGTATCTGACCAGCCATCTTCTGCAAATGCAGCAACAGCTGAGTTTTCCTGTAACAACTGCAATGTCCATATCGCAACGTCTGTGTCTGACCAATCATCATCTGTGTCCCCAACATCATCAGCAGCCATGGCTCCTTGCTCAACTGTTGCCATAGTAGGAGCTGAGATTTCTACAATAAATGCTTCAACATTAGTGACCAAAGCAACTCCATCGTCTTTGATATCACATCATGAAGGTCTTACAACAAAAGCCAAGTTAACGTCACCTCAAATTGCCATGAAGCCTGATTTTGCAATGGTTTTAAAACAGGTTTCTCCATTACCAAGTTGCAGTGACAAAAGGCTGAAAACCCGAAAGAGAAAGGCGGagaaaagtgaaattttaactTCGACTCCCATCAAAAATATGTTAGTCCccaaaaaagaagaagaaatgaATCAAGAAGCATCAAAACaagcaaagaaaaaaattaaattttcaatcagcAAAGGAAAACCAActgcaaaaaaagttaaacaagCTTCAAAAGAAAAATCAGTGAAACTAAGTCTTAACAAGAGTCAAAATAAAGGAAACCCCATAGATTACGACAATGTCACTCCAGGAACATCAAAACATGAAGAATTGGTTCTTTGTATTGTTTGTGGTGAAGATTACGAAGAGAACTGGATTCAGTGTAAGACTTGTGAAGGCTGGACACACGAACTTTGTGCTGATATTGATGATCcggtattttattattgtgactattGCAAGTTAAACAAGCCCTAA
- Protein Sequence
- MPKFKKKKKEGERRGEWLEEGMKAAVAAVIGNEMSERAASKRYNVPRSTLQRRVKAISNQQEVDMKPQLGHFKATFNDFYENQLVEHMKDLDSRLMPLSKHEFLKLAYDLAESLKIDHRFNREKKMAGKDFYESFMSRHLELSYRKPQSTSLMRCVGFNKPQVYRFFDQLEFLIGKHKFRPSRIFNGDETGVTCVHENDKVITVKGKRQVGKVTSAERGRNVTLMFCMSATGQFIPPIFIFPRKRMNDRLMIGAPTESISFPTPNGWMTTDSFMKWFQHFVSFTKPTMDDSVLLILDGHSSHKDLEVILYARENHVHMLSFPPHTSHKLQPLDRTFMKPFKNCYNAACSLWMRANPGARINDYDIAKLVADAYKQVCRLDIAENGFKCTGIYPTNRNIFNDIDFMSSEITNIPIQAQPSTASTTIPASDQPSSGSTTPAAELSASTSLDQTTMPASAQLDPASSRTQAAELSASTSVVQPAIPVSDQPSSANAATAEFSCNNCNVHIATSVSDQSSSVSPTSSAAMAPCSTVAIVGAEISTINASTLVTKATPSSLISHHEGLTTKAKLTSPQIAMKPDFAMVLKQVSPLPSCSDKRLKTRKRKAEKSEILTSTPIKNMLVPKKEEEMNQEASKQAKKKIKFSISKGKPTAKKVKQASKEKSVKLSLNKSQNKGNPIDYDNVTPGTSKHEELVLCIVCGEDYEENWIQCKTCEGWTHELCADIDDPVFYYCDYCKLNKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00727268; iTF_00727269; iTF_00727271; iTF_00727272; iTF_00727273;
- 90% Identity
- iTF_00727269;
- 80% Identity
- -