Basic Information

Insect: Flexamia atlantica
Gene Symbol: -
Assembly: GCA_035578135.1
Location: JAQJVK010000020.1:14469834-14474049[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.1e-13 8.7e-10 40.5 0.1 1 41 12 51 12 54 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.1e-13	8.7e-10	40.5	0.1	1	41	12	51	12	54	0.96

Sequence Information

Coding Sequence: atggaaaataaaaagaagCAGCTATTCCTGTACAAGGAAGAGGACATGGCAGCTGCCATTATTGCTGTCCGTAATGGGATGTCCAAAAAAGGAGCTGCAGCAAAATTCAATGTACCCAGGTCTTCCCTTGTGAGACGGGTTCAAGGGAAGGTCGCAGAGGGGAAGAAGATGGGGCCTGCGACTGTGTTGACAGCTGCTGAAGAAAAGAAGCTTGAAGAATGGTTAATAAATTTAGCCCGAAAAGGGTTTCCAGTTCATCGTTCAATCTTACTTGACACGGTTAAAAAGTGCCTCGATGAAAAACAACTGCAAACAATGTTCAAGGACAATAGACCGGGAAAGACATGGTGGGAGAGTTTCAAAAGAAGGCACCCTAAAATTGTTGAGAAAGAAGCAGAGAGCCTAACTAAATCACGAGCTTCTGTTACTGAGGACTCAATTAGGAAATGGTTTCAAGAGGTCCGAACCGTGCTTTCAGAAGAGGACGCACTTGAAGTGCTTAAAGACCCTAGTCGTATATTCAATGCCGATGAAACAGGGTTTATGTTATGCCCCAAAACTGGGAGGGTTATTTGTGAGAAGGGAGATAAAACTGATCCTTACAGAATCACACCCAACAATGAAAAAGAGCAACTGACGGTGATGGCATCATTTTCAGCGGATGGACTGACTGGGGCGCCAATGATCGTTTACCCATATGTTCGGCTGCCAAGAGATGTGGGACTGAGTGTCCCGAAAAAATTGGCAATAGGTTTGTCTAAAAGTGGTTGGATgaatggtgatgtattttttgagTGGGTGGCAAACCACTTCATCCCATCCATTGAGGAAAAGCAAATCCCCTTTCCCGTAGTGTTGTTTGTGGATGGTCACAAAAGCCATGTAACAATGCATGCAAGTGAGTTGTGTGCAGCAAAAAAGGTTGTCTTAGTGGCCCTTCATCCTAACTGCACTCACATCCTGCAGCCTGCAGATGTTAGTGTATTTCGTCCACTAAAAGTTGGATGGCGTGAGACCGTCAGAGAGTGGAGGTTTCACAATTTTCCACAAGAAGTGACCAAAATCACCTTTGCTCCCCTGATTGATTCTGTATTTGCTAAGAAAGCCACCCCGATTATAATACAAAATGGTTTCAAAGCTTGTGGGCTTTATCCATTTGACCCATCAGCTGTTGATTACACAAAATGTGTCAAGAGTCGAGAAGTCATCGTAGAAAGAAGCAGCACATCTGTCAGCAAACCAACACACTTGGAGTACCTAGAGTCCCACATTGAAGAAGGTACTCTTAAAGCGTTCAAAGAGTCTGGTGAAACATGGTGTGGAGATGAAAAATCTCGTGATTTGTTCATTGTTTGGAAGAAATTTCTTTCTACTGAAGAGTGTAGGCCTAGACTGGCATGCCAACAGCCCTTAATTACTTTGAACAGCCCTGGTGAGGAGCGTGAGTCGTCAATCGACGACCCAGAAGAAATTAACAACTCAACTTGTGAGGATGACCAAACTGAAAACAATCAAATTGCCTCCATCGAAGAAATTCCTCAAGAGCTTCCTACAACGCCGGAACACCAGAACCAGCTTCCTGCAACACCAGAACAAGCAAGCCAAAATGATGAAAGCAGAGTGGAAGTAAAATCTACAACAAGTAAATGTTCTGTGGAAAAATATCGCTGTGAAGATCAAGTAGCCAcaccatttaaaaagtatttactcATCCCGAAGTCCCCCGAGAAAAAAGACGTGAGTAAAACACGAAAGCGCCTTAGATTTCCTGCAGTGATCAGTTCGCCCCATTATCGTGATTTCAtcctgaaaaaagaaaaagaagccgAAGAGAAAAAGTCTAAGAAGAGAAGCAAAGAAGATAAAgaccttacaaaaacaaaaGGAATCCAAGGCAGGTCCAAGGACGGCAACCAGTGTAGGCATTGTCTTGCAACCGAGTATGCTGTAGAAACTTTGCCACAAGTCCTTGGGCAGTGCCCTTATGGAAACCTCCTCAGGAACATCCGACACAACAGAATACGTACAATTATCGCTGATGAATTCCGGTCAAAATCATATGAAGTATATGAAGAAGTAACTGCAACAGCAGAAAACACGTGA
Protein Sequence: MENKKKQLFLYKEEDMAAAIIAVRNGMSKKGAAAKFNVPRSSLVRRVQGKVAEGKKMGPATVLTAAEEKKLEEWLINLARKGFPVHRSILLDTVKKCLDEKQLQTMFKDNRPGKTWWESFKRRHPKIVEKEAESLTKSRASVTEDSIRKWFQEVRTVLSEEDALEVLKDPSRIFNADETGFMLCPKTGRVICEKGDKTDPYRITPNNEKEQLTVMASFSADGLTGAPMIVYPYVRLPRDVGLSVPKKLAIGLSKSGWMNGDVFFEWVANHFIPSIEEKQIPFPVVLFVDGHKSHVTMHASELCAAKKVVLVALHPNCTHILQPADVSVFRPLKVGWRETVREWRFHNFPQEVTKITFAPLIDSVFAKKATPIIIQNGFKACGLYPFDPSAVDYTKCVKSREVIVERSSTSVSKPTHLEYLESHIEEGTLKAFKESGETWCGDEKSRDLFIVWKKFLSTEECRPRLACQQPLITLNSPGEERESSIDDPEEINNSTCEDDQTENNQIASIEEIPQELPTTPEHQNQLPATPEQASQNDESRVEVKSTTSKCSVEKYRCEDQVATPFKKYLLIPKSPEKKDVSKTRKRLRFPAVISSPHYRDFILKKEKEAEEKKSKKRSKEDKDLTKTKGIQGRSKDGNQCRHCLATEYAVETLPQVLGQCPYGNLLRNIRHNRIRTIIADEFRSKSYEVYEEVTATAENT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -