Fatl082509.2
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- bab2
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000051.1:74599-85172[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-14 7.2e-11 43.9 0.1 3 45 389 431 387 431 0.91
Sequence Information
- Coding Sequence
- ATGGCGACGCCGCAACAATACTGCCTGCGCTGGAACAACCACCGCAGCAACCTACTGAACGTGTTCGACCAGCTGCTGCAGAATGAAGCCTTCACGGACGTGACGCTGGCCTGCGAGGGCGGAACTTCCGTCAAGTGCCACAAGATGGTGCTGGCCGCCTGCTCCAGCTACTTCCAGCATCTCTTCACTGACCTGCCCTGTCGCCACCCGGTGGTCATCCTAAAGGACGTGAAGTACTCGGAGATCAAGGCAATCCTGGAGTACATGTACCGCGGGGAGGTGAACGTCGGGCAGGACCAGCTGGCGCCACTGCTCAAGGTCGCAGAGGCGCTCAAGGTCAAGGGGCTGGTAGAGGAGAACGGGGCCAAGGCCCCCGCCGAGGACGACCCGAGTGTGATCACAACCAGCAGCCCCGCCGCGCCCCCGCCGCTCCCCCACAGCAGCAGCGTCAGCGACGCCTCGCCCCCCCACTCCACCGgCTCCAAATCACAGATTTCAATTATAAAGGTCCTAATTTTGCCTTGTATCGGGCATGTGAACCAAAAATTAGTAGCCGAGGACGACCCCAGTGCCATCACCACCAGTAGCCCCGCCTCTCCCCCCCACTCCACCAGTATCCACAACCAGGGGTTCCCCAAGTACCCATACCTGTACGGCAAGTCGCCAGCAGTGGAGCGGGGGCCGGGCGGGGGGCGGATGTCGCTGCCCCCGATGTGGGGGATGCCGGGACTGCCGCTGCCGGCCCCGCCCCCGGGCTGCTACGAGGACCTGCCCCCGCTGCGACGCAAGAAGCTGTCGTCGCTGCTCATGAACCGCGGGGACACTCCGATACTGCGGACTGTGCTGGGGCAGGGGCAGGCCGACTCCAGCCAACCGATGCCGCTGGTGTGTCACCCCGACAGTCACGACCAGCACACCAACGGCAGCCCCCGCGACTCTGACAAGAGCATGAAGACGGAGCCTTCGGAAGACGCGCCTTCGCCCTACACGGACATCTCCTTCATGGAAGACGACCCGGAGAGAgCAAACAAAATGTCAGTGCCTTACTCATCACCCCAGTCTGGATATGGAGAAAGTAAAGGTGTGGGCGGCGTGTCGTCGGCGCTAGTCACCTATGTGCCGACACAGAAGCCTGAGTGGAAGCGCTACAAGCAGTACACGCGCAATGACATCATGTCCGCAATCGAGGCCGTGCGCTCGGGCATGAGTGCGCTACAGGCCGCGCGCAAGTACGGCGTCCCCTCGCGCACCCTCTACGACAAGGTAAAGAAGCTGGGGATCACAACGGGCCGTCCCTTCCGGCGGAGCAGCATCGGCAACGGGGGCCCCGGGTTCCCGTACAGCctgggcgggggcgggggcgggggcatGATGTTCCCCCCAGAGGAGGAGAGCTCTGGGGGCACGGGGGGCGGGGGCTACAGCAACATGGAGCACGGCGGGGGCTTCCTACACCACGCACTCGAGCCCAAGTATGAGCAGCGCCCGAGTGAGACAGACCGAGAAGCGGCGGCCACCAACGCGAGCAACCATTCGAGCAGTCCGGGGAACAACCGGTCGCCCAGCCCCACGCTCATCCGCTATGCCCACCGCCCCAGCCTGACGCCCTCCCCCCCGCCGCCCCCCCCGCCCTCGGACCAGGACGAAGACCGAGTGGAGGACCTGAGCATGGCTCGCAAACCCGAGCCGCCCTCGCGCGTCATCATGCCGCCTATGAGCCACCTCACCACCGCCGGCGACGCCCACCCAGACCCCCGCGActag
- Protein Sequence
- MATPQQYCLRWNNHRSNLLNVFDQLLQNEAFTDVTLACEGGTSVKCHKMVLAACSSYFQHLFTDLPCRHPVVILKDVKYSEIKAILEYMYRGEVNVGQDQLAPLLKVAEALKVKGLVEENGAKAPAEDDPSVITTSSPAAPPPLPHSSSVSDASPPHSTGSKSQISIIKVLILPCIGHVNQKLVAEDDPSAITTSSPASPPHSTSIHNQGFPKYPYLYGKSPAVERGPGGGRMSLPPMWGMPGLPLPAPPPGCYEDLPPLRRKKLSSLLMNRGDTPILRTVLGQGQADSSQPMPLVCHPDSHDQHTNGSPRDSDKSMKTEPSEDAPSPYTDISFMEDDPERANKMSVPYSSPQSGYGESKGVGGVSSALVTYVPTQKPEWKRYKQYTRNDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTGRPFRRSSIGNGGPGFPYSLGGGGGGGMMFPPEEESSGGTGGGGYSNMEHGGGFLHHALEPKYEQRPSETDREAAATNASNHSSSPGNNRSPSPTLIRYAHRPSLTPSPPPPPPPSDQDEDRVEDLSMARKPEPPSRVIMPPMSHLTTAGDAHPDPRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00051992;
- 90% Identity
- iTF_00727564;
- 80% Identity
- iTF_00727564;