Fatl021875.2
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- lov
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000002.1:70717350-70726319[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-18 6.5e-15 56.9 0.0 1 44 133 176 133 177 0.96
Sequence Information
- Coding Sequence
- ATGAAGATGGAGAGTGAGGACTCGGACGCGGCGGAGTCCAGCCAGAACCAGCCGATGGAGCTGACCACCGAGAGCCGTCAGTCCGAGAGTCGGCCCGAGCCCAACAACGCCACCAGCGAGTCCGTCTCCAgcctgccgccgccgccgcatGAGACGTTTGAGAACTCGTCATTCCCGCACCTGACTTCCATATCAGCTTTGTCCCTGACGCCCCCTCACATGTTCTCGCTAGATGCACATTTTGGACTGTTCCCTGGAATGGAGAGCTGTCGAAATTCCTTTTTCAACGATTTCTCAGATCATCGAGGAGAAAATCACCAGATGGCAGTTAAAAAGAAAATGGGCAGACCCAAGGGCCAGCACAGTGCGCCCCGAGGCGGCCCCCCTCGTTCCTGGACCAACGCCGAGCTGACGGAGGCTCTGCAGCACGTCTGGAACAAGAAGATGACGACTTCCCAGGCCTCCCGCATCTTCGGCATCCCCTACAACAGCCTGCTGATGTACGTCAGAGGCAAGTACGGCAAGTCCCTCAAACTGGAACAACTCAAGAAGGAATGCTTCGGGGACGTCGGCGGCCCTTTGGACATCCTAGGGCTCGGCCCTTTATCTTCGAACAATAACAACCCGCCACCGAAGCACCACATGAAAGGACCCGAGCCGGACTTGATGCTAGGGCCCCCGGGGTTCAACCCTGGCTCTTACCCGTCACCGAACTTCTATCCCGATTTCGGCGCGTCGTTTCCGGTACCGGTAGGGATGGTCCATCTTTTACCGCAATCCGAGAAAAACCGGGATCACTCCGGTCCAGTAGACTATGTCAAGGAGGAGTATCACAGGAACCTCCCGAACCCCATGGACTACGGGAAGGAGGAGGTGAGGAACAGCCCGGCGAACATGGAGTTTCCCAAGGAGGAGATGAACGTCCAGAACAACTCTGTGGAGGAGGAGGAGGGAGAGCCGCAGTCGCAGTCACAAACGCAGTCGCAGTCGCAGTCGCAGAGACATCACGAGGAGCAGAACGGTCAAGACTGA
- Protein Sequence
- MKMESEDSDAAESSQNQPMELTTESRQSESRPEPNNATSESVSSLPPPPHETFENSSFPHLTSISALSLTPPHMFSLDAHFGLFPGMESCRNSFFNDFSDHRGENHQMAVKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGDVGGPLDILGLGPLSSNNNNPPPKHHMKGPEPDLMLGPPGFNPGSYPSPNFYPDFGASFPVPVGMVHLLPQSEKNRDHSGPVDYVKEEYHRNLPNPMDYGKEEVRNSPANMEFPKEEMNVQNNSVEEEEGEPQSQSQTQSQSQSQRHHEEQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00051679;
- 90% Identity
- iTF_00051679;
- 80% Identity
- -