Fatl072862.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- bab2
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000021.1:5354802-5374914[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-11 1.4e-08 36.6 0.0 1 39 623 662 623 666 0.90 2 4 5.1e-12 5.5e-09 37.9 0.1 1 39 677 715 677 718 0.94 3 4 1.1e-16 1.2e-13 52.8 0.0 1 45 732 777 732 777 0.98 4 4 2.9e-18 3.1e-15 57.9 0.1 1 43 784 827 784 828 0.96
Sequence Information
- Coding Sequence
- ATGGCGGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCCAACATGACCTCCGTGTTCCACCACCTCCTGCGGACGGAGGCCTTTGTGGACGTCACGCTGGCCTGCAACAACGACTCCCTCAAGGCCCACAAGgtAGTTTTGTCGGCCTGTTCATCGTACTTCCAGAAAATCCTGTTGGACAACCCTTCTCAGCATCCAACAATCATCATGCCGCAAGATGTATGTTTTACTGATCTCAAGTTCATCATAGAATTCGTCTACCGTGGAGAAATCGACGTGTCTCAAGCAGAACTGCAGTCGCTGCTGAAGACGGCGGACCAACTGAAGATCAAGGGGTTGTGCGAGGTGCCGGAAGGGACGGACACCAAGGACATGCCGGGGGCCGAGGTGACGCCGCTGCCCCGCCCCCCCACGCCCCCGCTGCTGCCCCCACCCCCTGCCCCCGCCTCTGCCCTCGCCCGCGCCCACAAGTTCCGCCGACTCACTGTGCAGGCCAAGCGGCGACTGGATACGAGGAAGCGGCTCTTCCGCGAGAACCTCCAGCAGAAACAGCAGGTGGAGTTGACGCAGATCCACCAGACCCAGACGATCCACCAGCCACAACAACAGCAGATGCTGCAGAACCACCAGAACCACCAAAACCACCAGACTCAGCAGCCTCTCCACCAGAGCCAGCAGACTCAGCACAACTCGCACCACCATCAGCAGAACATGCATCAGCAGCAGTCGATGCATCAGCAGCAGCAGACGATGCACCAGCAGCAGTCGATGCACCAGCCGCAGCAGACGATGCATCAGCCGCAGCAAGCGCAGTCACACCACCCGCAGCAGAGCGTGCACATCGTGCAGCAGCAGCAGCCTGCGATGCACTCGACGCAGCACCTGCAGCATCCGCAGCACCAGGAGCAGCAGCAGCCGCAGATGATACAGGCTGTGGTCACTACAGTCCATGACCCCGCCAGTCAGCACAACCAGATGTCGGAAAGTCTGGCCAACTGCATCACAGTCGCCACCAGCACAGACGACGACCTGAAGAGTGGAGTGGGCGGGGTGGTGATACTGGAGGGCCGTGTGGGGCACGGGGGGCACTTGCAGCCCCACCACGCCGACGCCATCATGATGACCAGCCCCCCGCCCATCATGAGCACCCACGCCCTCCCCTCCACCCAGCAAGTTCTGCTGGACTCGTCGGGGCTGAGTGTACACTCGGACGTGGACTCGCTGACGGCCGACGTCGGGACACAGAACACCTCCCCCACCCCCTCCTCCCTGCTGCCCTCTCCCCCGCACCACCAGGAGATGACCGTCCTTACGCCGGTGGAAGGGCGAGTGACGGTGGACACCAGCCCGCTGTCGCAGGGTCACGACGGGGAGGAGGTCAAGGTCAAGTTCGAGACCCTCCGCGCCATGGAGCAGACCGACCCACTCGACATGGACGCCCACATGGCGGACAGGAAGGTGGAGAACGGAGAGGAGAGTGTGGAGCACACGATGCACACCATGATGATCACCCCGGAGCTGCTCGGCCTCATCCCCTCCAACCCCACCGGCCACCAGGAAGGTGGAGAACGGAGAGGAGAGTGTGGAACACACGATGCACACCATGATGATCACCCCGGAACTGCTGGGGCTGATACCATCCAACCCCACCGGCCACCAGGGGTGAGTGACTCTGCATGTAGTGTGTGGTTGTGGTTGTGTCGCCAGAAGGTGGAGAACGGAGAGGAGAGTGTGGAACACACGATGCACACCATGATGATCACCCCGGAACTGCTCGGCCTCATCCCCTCCAACCCCACCGGCCACCAGGCGGAGGTGACGGACTGCCCCAAGCGGGACGCGGCGACGTCCAAGACGTGGACCCAGGAGGACATGGACGCAGCCCTGGATGCGCTCCGCAACCACACAATGAGTCTGACCAAGGCGAGCATCACATTCGGCATCCCGTCCACGACGCTGTGGCAGCGCGCACACCGCCTCGGCATCGACACGCCCAAGAAGGACGGCCCCGCCAAGAGCTGGACTGAGGATGTGCTCAACGTCGCGCTGGAGGCCCTCAGGAACGGGTCTATATCGGCCAATAAAGCGAGCAAAGCCTATGGTATCCCGAGCAGTACGCTGTACAAGATTGCGCGGCGGGAGGGGATCCGGCTGGCGGCCCCGTTCAACGCGGCCCCGACCACGTGGACGCCCGAGGACCTGGAGCGTGCGCTGGAGGCCATCCGCAGCGGACAGACGACGGTGCAGCGCGCGGCCGCGGACTTTGGCATACCCAGCGGCACGCTGTACGGCCGGTGCAAGCGAGAGGGCATCGAGCTGAGCCGCAGCAACCCCACGCCGTGGAGCGAGGACGCCATGACCGAGGCCCTCGAGGCCGTCAGGCTTGGACAGATGAGTATCAACCAAGCAGCGATCCACTACAACCTGCCGTATTCGTCGCTGTACGGACGCTTCAAGCGAGTCAAGTACGAGGCAGACCACCCGTCGTCGAGTGAGAGCGAGGAACTCCCACTCGTAACGACTCATCACAGCCTACCAGGCCAGATCATGCTGGTGCAGTACCAGCAGCCCACGCTCTACCAGCACACGCCCAGCTGA
- Protein Sequence
- MAGQHYCLRWNNYQSNMTSVFHHLLRTEAFVDVTLACNNDSLKAHKVVLSACSSYFQKILLDNPSQHPTIIMPQDVCFTDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEGTDTKDMPGAEVTPLPRPPTPPLLPPPPAPASALARAHKFRRLTVQAKRRLDTRKRLFRENLQQKQQVELTQIHQTQTIHQPQQQQMLQNHQNHQNHQTQQPLHQSQQTQHNSHHHQQNMHQQQSMHQQQQTMHQQQSMHQPQQTMHQPQQAQSHHPQQSVHIVQQQQPAMHSTQHLQHPQHQEQQQPQMIQAVVTTVHDPASQHNQMSESLANCITVATSTDDDLKSGVGGVVILEGRVGHGGHLQPHHADAIMMTSPPPIMSTHALPSTQQVLLDSSGLSVHSDVDSLTADVGTQNTSPTPSSLLPSPPHHQEMTVLTPVEGRVTVDTSPLSQGHDGEEVKVKFETLRAMEQTDPLDMDAHMADRKVENGEESVEHTMHTMMITPELLGLIPSNPTGHQEGGERRGECGTHDAHHDDHPGTAGADTIQPHRPPGVSDSACSVWLWLCRQKVENGEESVEHTMHTMMITPELLGLIPSNPTGHQAEVTDCPKRDAATSKTWTQEDMDAALDALRNHTMSLTKASITFGIPSTTLWQRAHRLGIDTPKKDGPAKSWTEDVLNVALEALRNGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRSGQTTVQRAAADFGIPSGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGQMSINQAAIHYNLPYSSLYGRFKRVKYEADHPSSSESEELPLVTTHHSLPGQIMLVQYQQPTLYQHTPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00727580;
- 90% Identity
- iTF_00727580;
- 80% Identity
- iTF_00727580;