Fatl063355.1
Basic Information
- Insect
- Flexamia atlantica
- Gene Symbol
- retn
- Assembly
- GCA_035578135.1
- Location
- JAQJVK010000015.1:5786504-5816871[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.2 7.3e+04 -3.5 0.2 32 39 172 179 172 180 0.87 2 3 3.7e-21 4.4e-17 64.6 0.0 3 89 226 310 224 310 0.94 3 3 2.2 2.6e+04 -2.0 0.0 26 38 441 453 405 468 0.68
Sequence Information
- Coding Sequence
- ATGTTCACATCCACCGCCATCGCGATCGCAGGGGACAATTCATTCTTCTCCCCATTCACTCCTCCTCCTGATGAAGGGACAATTCATTCTTCTCCTCCAACACTCATCCCTCTGTTGCAGGGGCAGTTCATTGTTTTCTTCCTTCACTCCTCCCTCTGTTCCAAGGACGGATCATTCTTCTCTTTTTTCACTCCTTCCTCTGTTGTCGGGACAGATAATTCTTCTCCTTCCTCCCTCCTCTCTCTGTCGCAGGAACAGTTGATCCTTCTCCTACTTTACTTCTCCTTCTGTTGCAGGTACAGCCCATTTTTCACTCCTTCGCTCTCCCTCTTTTGCAGAGACGCTGAACAACATTCTGGACTTCAGACTGATGGAACCCTACGAACGTTACAACCAGGAGTCTGGAGCGCTCTCAAGGTTCTTTCTTCACATCCTCCTTCATTCCTCCATCTGCTGCAAGGACATTACATTCTACTCCTTTACTCCTCCCTCTGTTGGCTGTTGCAGGGACAGGACCTGTACAAGCTCTACAACCTGATGCCTGGAGCGCCCTTAAGGTTCTTTCTTCACATCCTTCTTCACTCCTTGTCTGTTCCAGGGACGCCGATCAACCGGCTGCCAATCATGGCCAAGTCTGGACGGGTCATTCTTCTCTTCACTTGTGGACTACCTTCAAGGTTATTTCTTCACATCCTCCTTCACTCCTTGTCTGTTGCAGGGACGCCGATCAACCGGCTGCCCATCATGGCCAAGTCTGTGCTGGACCTGTACGAGCTGTACAACCTAGTGATCCAGCGCGGCGGCCTGGTGGACGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCTTCGTCCATCACCTCCGCCGCCTTCACACTCCGGACTCAATACATGAAGTACCTGTACCCGTACGAGTGCGAGAAGCGACGGCTGAGCACGCCGGGCGAGCTACAGGCGGCGATCGACGGCAACCGGCGCGAGGGCCGGCGCGGCAGCTACGGCACCTACGCCGAGATGATGCAGCGCAGCCCCTCGCAGATGTCGCCACTGTCGCTGGTCACCGGCCGACCACAGGTGAACGGCAGCGCGCACCACCCCACCAACAACAACCACCTGCCTCACCAGGCGCTCATGCCGCCCAGTCTGGCTGCTCATGGAGCAGCAATTCCTCCAGCAGAATTCGAAGCTAGAATGGTAGAATATGTCAAATTGTTAAATAAGGAACTGCGCACCACAGGTGTCACCCCTCCAAACCACAGACACAACTCGCCCCCCACCTCGCCCCCGGAGTCGGCCCTGGCGGCCTTCGACATGTCTCGGCTCACCCTCTGGAACCTCTACCACAACCAGGGGTCGCCGCCGGAGCCGCAGAAAGAACCAATCAACCTGGAGAAGCGAGAGGACGCGGCGGGGCCACCCCCCGCCAAGCGCCACCAGCCCGAGCCCGACGACACAACCCCCCGCCCGGCGGCCACTCACATCAAGATCTCCAGCAGAAACGACGGCCGTGGGGGAAGCGACAACTCTCTCGTGGTCAGTCTGGACATCAACGGTACCATGTACCAGGGCGTCCTGTTCGCACAAACACCTCGTAACCCTCGCCTCACCTCGTAG
- Protein Sequence
- MFTSTAIAIAGDNSFFSPFTPPPDEGTIHSSPPTLIPLLQGQFIVFFLHSSLCSKDGSFFSFFTPSSVVGTDNSSPSSLLSLSQEQLILLLLYFSFCCRYSPFFTPSLSLFCRDAEQHSGLQTDGTLRTLQPGVWSALKVLSSHPPSFLHLLQGHYILLLYSSLCWLLQGQDLYKLYNLMPGAPLRFFLHILLHSLSVPGTPINRLPIMAKSGRVILLFTCGLPSRLFLHILLHSLSVAGTPINRLPIMAKSVLDLYELYNLVIQRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPGELQAAIDGNRREGRRGSYGTYAEMMQRSPSQMSPLSLVTGRPQVNGSAHHPTNNNHLPHQALMPPSLAAHGAAIPPAEFEARMVEYVKLLNKELRTTGVTPPNHRHNSPPTSPPESALAAFDMSRLTLWNLYHNQGSPPEPQKEPINLEKREDAAGPPPAKRHQPEPDDTTPRPAATHIKISSRNDGRGGSDNSLVVSLDINGTMYQGVLFAQTPRNPRLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -