Fyps023605.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- -
- Assembly
- GCA_947568875.1
- Location
- OX387672.1:979470-1001994[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 2.3 2.4e+02 3.3 3.2 1 22 313 333 313 334 0.90 2 27 0.23 25 6.4 0.7 2 23 405 426 404 426 0.96 3 27 6.4e-05 0.0068 17.6 1.2 1 23 430 452 430 452 0.97 4 27 0.0061 0.64 11.4 0.4 1 23 457 480 457 480 0.90 5 27 0.015 1.6 10.2 0.5 2 23 488 510 488 510 0.94 6 27 0.093 9.8 7.7 1.4 2 23 518 539 517 540 0.94 7 27 0.00037 0.04 15.2 0.2 2 23 547 568 546 568 0.95 8 27 6.8 7.2e+02 1.8 1.0 1 23 666 689 666 691 0.83 9 27 3 3.1e+02 2.9 0.1 1 21 714 734 714 735 0.90 10 27 7.6 8.1e+02 1.6 0.2 1 22 881 902 881 904 0.87 11 27 1.7 1.8e+02 3.7 0.5 1 23 1006 1029 1006 1029 0.91 12 27 0.4 42 5.7 0.5 2 23 1055 1077 1054 1077 0.96 13 27 0.045 4.8 8.7 1.1 3 23 1101 1121 1099 1121 0.95 14 27 0.00016 0.017 16.4 1.6 1 23 1125 1147 1125 1147 0.97 15 27 0.0027 0.29 12.5 0.5 1 23 1152 1175 1152 1175 0.97 16 27 2.6 2.7e+02 3.1 0.3 2 19 1183 1200 1183 1205 0.76 17 27 1.7e-05 0.0018 19.5 1.7 1 23 1212 1235 1212 1235 0.95 18 27 7.9e-05 0.0083 17.3 3.1 1 23 1241 1263 1241 1263 0.97 19 27 0.00014 0.015 16.6 0.7 1 23 1269 1291 1269 1291 0.99 20 27 0.2 21 6.7 0.1 1 23 1335 1361 1335 1361 0.83 21 27 0.033 3.5 9.1 0.3 2 23 1433 1454 1432 1454 0.96 22 27 1.3 1.4e+02 4.1 0.7 1 23 1458 1480 1458 1480 0.92 23 27 0.0082 0.86 11.0 2.2 1 23 1485 1508 1485 1508 0.92 24 27 1.6 1.7e+02 3.8 0.6 1 11 1514 1524 1514 1532 0.87 25 27 0.0011 0.11 13.8 1.0 2 23 1545 1567 1544 1567 0.96 26 27 2.7e-05 0.0029 18.8 1.2 1 23 1573 1595 1573 1595 0.98 27 27 0.0039 0.41 12.0 3.0 1 23 1601 1623 1601 1623 0.97
Sequence Information
- Coding Sequence
- ATGTTCCAACAGTGGGATCATTCAGAGGACTCGATGGAACAGGATCAGATTTGCGAGCAGTGCATCTGTCGGTTGCGAGATGCTAGTGACTTTAAGAGGGTGGTCTTGGACTCACAAGAGGAGCTGTTCCAGCAGATAGATGCTGAAAATGAAACAAGCATCAAAGAAGAAAGACTAGATGAGGACTTTCTGATAGAATCCAAACCTGAGAGCGAAGGCACTGTGGACACTATGTACACTGACACAGAATACACTCTGGACACCGCTGACACTTTGATGAGTCTCAAAGATGAGACAGAGTATGAGGAGGTTGAGTATTTAGAAGATGAAGATGTTGGTGGAGCGAGTGATGTTGTTGATACTGATTCCTCACAGCCAGCAGATCAGTCAAGACCAGCAAAACAGCAGAAGAAACCTAGCAAACAAGACGATGACGAGGAACCGCCAAAAAGGAAATGGCCCAAAAAGCTGCCAAAATCAGAACGGCACAAAACTTACAAACAATACTCCGAGATTGATCTACGAAAATGTCTGGAAGAAGTCAGGAACAATGTACTGACGGCTGCTGAGGCGGCGTTGAAGTATGATATACCGAAGAAGACTATTTGTGCCAAGATTAGAGTGGATCCTAATGATGTCGGGACAGACATCCAGAACTCTATAAACAACACAACTACCTCCGAAACTGTGACAACGAGCCGAATAGAGGTACCCACACTATCATATGAAGCAGCAAACGAGACAGACTCGGAGGCCGAAAGCCAGGAAGTATCAAACAAATACCCACTATCACACGAAAAAGCAAAAGAGACAGACTCGGACATAGAAAGCCAGGAAGTACCAAACAAGCTCCAAATGCTTAAACACAAGAATAATCTCAAAATGATCCTTAAATATTCCAACGCAACATTAATCAAAGGAAAGTCAGCAGCTGGATACTCGTGCTGGTTTTGCGACAAACATTTGAATCCTGAAAAACTAAAAAAGCACAATTTTGAACACGGAGATGTGTACGATGATGCTATAAAAGTGAAATACGTTTCGGATTTAATAATAAAACTGGATGTTACTGGACTTAAATGCTGGCTATGTGAAGCAGAAATCAACAGTCTTGAAGTATTGATGGGGCATTTACAAGAAGATCATAACAAAACTATTTATACGGACATAGACAATCATTTTATACCTTTTAAGTTTGATACGGACGAGTTACAATGCGTAATTTGTGCAGCAGAGTTCAAATATTTCAAACTACTCTCAGAACATATGTGCGAACATTATAGTAACTACAATTGTCCGGAATGCGACCGTGTGTTTATAAATAAACAATCAATGCAAACACATAGATACAGACATAAGAAAGGAGAATACAAATGTTCTCAATGCCCAAAAGTCTTCGACAGTCCTATGAAAATACGGGAACACGAATACGTAACTCACAAACTGTCCAATAAGAAGAGAAAGTGCGGCTTTTGTGACGAGAAATTCTCGTCAGCAGACTTAGTAAAGAATCACGAAGCTAGAAAACATGGCGTCGCACGTTCGCAGCTTACCTGTGAAGCTTGCAACAGGCTGTTCGCTACCGAGAAAGGTCTTGCAACACATAAGAAAAGACACCATTTGTTAATGCGTCCTATTGAATGCGAGACTTGTGGGAAAGGATTTTATACGCGACAAGAACTCAACTGGCATTCAGTCACCCATACAAAGACCAAAGAATTTCATTATGTCCAGATTGACAATACAACGAAATCCAACAATAAGAGGAATCTAAGGAAAAGACCTACCTCTGAAATCGAAGCGACTAAAGTTACAGAAACAAAAAAAGATCGCAAATCGAGCGAAGCGAACTTAAACGATCAAGAAAGAGTGGAAAATATAAAAGAACATTCAAAGCCAGATGATCAACGTTTCATGTACAAACACAAAGCTAATATAAAAGCCATATTACAAAATTCTAACGCGACACTCATAAAAACATACGGGCGAGACGGATATTCATGCAATTTCTGCGACTTTCAGGCCGCCAAACCGTTTGTATTGAAGCAGCATAATCTGAAAAAACACACCAATGTAGGAGACGAAGCCATCAAAACAAAATATGTATCAGATTTGATCATAAAGTTAGATGCAACAGATTTCAAATGCAAGTTATGCAAAGAACCTATGAACACTTTAGAAGAGTTCATGGGACATCTAAATGTCCTGATTGACAATACAACGAAATCCAAATTGGGACGATCTAAAACGAAACTGAGGACAATGCCCACCATCTTTAAAACCAAAGCATCTTTTTTGGATGAAAAAACTAAAAAACTTATCGAGCTGAATAAATTAAAAGCAAAAAACTTAACAAAACCGGTCGTAACCACAGTAAAAGACGATGTCATAAATATTACCGAAACAAAAGTAATCGCCATAGAGATTAATATGGAGCCTAAGATAGAAGAAATGGAGGCTCCAGTGAATGCCGATCAAGTCCGAACGCGATACAAGGCTATAGTCAACGACAAATTCAAGAAAGAAAATAAAGAGCCCGAGAAATTTGAAGTCAACGAAATGAATAAACATAAAGATAACATAAAAACTATATTACAAAGTTCTAACGCGACAATCATCAAAGGATTTTGGGGAACTGGCTATTCTTGTACCTTTTGCGAAGAACAGAGAGAAATACCTTCAGAATTAAAGCTGCATAATTTAGAAGATCATAGCAATGTAGGAGACGAAGCTATCAAAGTTAAATATGTATCAGATTTAGTTATACGACTAGACATTACCGACCTCAAATGCAAACTATGCAACGCAAATGCCCATCGGAATAAAAAGGCTACAAATAATGAAAATGGCAACGCTAAGAGCAACGTGCAGAAAAACACTTCACAGGCTGAAGTTGAGAAAGATATGAACAGCATACAGAAAAATAGGAACTTTCTGGCAAACTTCAAAGAGAGCGTTCGTTCTGTCCTCAGATGCACAAACGCTACACCAATCCGAGGTTACTGGGGCATCGGATATGCTTGCATCTACTGCAAATATCAAACCTCTGCAATTTCAGCGCTGAAAAAGCACACACTGACAACACATTCCCAAAATGTTGACGAACTTGACAACGTGAAATATGTACCAGATATGATCATTAAACTAGACATTACAGACCTCAAATGTGAGATATGTGACTGTGAAATAGAAACCCTTGAAGAAATCATGCACCATATCAAAGTTGTTCACAGCCAACCCATCCATTTCGACACTACTAATCATATCGTTCCATTTAAATTCGGAAAGAAGGATTTAGCATGCGCTCTTTGCGCTAAACAGTTTAATTATTTCAAGCATTTATCTGAGCATATGAATGAGCACTTCCCAAACTATACATGTAAGGAATGCAATCGCTTTTTTATCAATCTACGCTCTTTACGTACTCACGCGATCAGACATCTAACAGGCACATTCGTCTGCACGTTTTGCCCCAAAATCTTCGACACCCGAATCAAAATGAAGGAACACGAAAGAGTCTTACACCTAAAAGGTTCTAAAAATCGTAAATGTGGGTATTGTGACGAGAGATTCATGGATGCTGTGAGGAAGACGGAACATGAGGTGAAGGAGCATGGCGCTCCAGTTCGTAAATTCGCCTGCAAAGACTGCGGGAAAGTTTTTGACAGTCAACGTTCTGTAAAGAATCATATGAACCATCTTCATTTGCAGCTAAGGCCGCACAAGTGCCCGGAATGTGACAAGGGATTTTATAATAAAAATGAGATGAAGCGACATAGAGTAAAACATACTAAGATCAAGGAGTTTCAGTGCTCGGTTTGCTCAAAATACTACGTTTCTAGAGCTTCTCTTAGAGGCCATATGAAGATCCACGACAGTGAGAAGAGTTATACTTGCGGCGAAGTGGACCCGACCCGAGAGAACATGTACCAACTCATAAAAGAAATCAAAGCTATTCTAACATTCACGAACGCGACCCCTTACAAGTCGAAGAACGTTCGCTATTACTGCGCGTACTGCTCCACCGACGGACCTTATTTCGAGGACCCCGACGACCTCCGAACCCACACAAGGACCGAACACGTCGGCCACAGAACAGAGAAGATAGAATACGCCATGCGACCTTATTGGATGAACGAGGTAATCAAACTTGATATAGAGAACCTCCTTTGTACTGTTTGCTGCGTAGTCATAAACAATTGGAATGAAATGTTCAAACATTTAAAAGATAAGCATAATATAGTGTTAGATCAAGCGTATACTAGAGTCATTCCTTACGTTTTGAAGACAGATCTTCAATGCGCGCTGTGCAAAGAACCGTTCAGTAACTATCTTCATTTAGACGGCCATATGAACGCTCATTACAATAACTATGTTTGCGACGACTGCGGAGACACGTTTCTAGCGCACAATCGTTTAAAACAGCACGTAAAAATCCACAACGTAGGCAAATACAGATGCAGGTTTTGCCAAAAAGTGTTTACTTTACAAAAATATATGCGGAAACATGAAGAGTTAGTTCATCAGCAACTGTCAAAGTTCAAATGTCTGTACTGCCCGGAGAGGTTCACGGGTGAGTACATAAGACACCTACATTGTCTAGAAAAGCACGCAGAAAAAATTAAAACCATGACCTGCGAATATTGTGGGGAAAGTTTTACGTGGAAACAGTACTATATGAACCATATTAGAAAGAAACATGAGAATAAGAAATCTTATGAGTGCGACAAGTGCGATAAGAAATTCTATGGTAATTATGAGTTGAAGGAGCACTTGTTAAGACATGTTGGTACCAAGAACTTTGAATGTCAAATTTGCCATAAGAAGTATGTGTCAATGAATTCTTTGAAGCAGCATGGGAAACAGCATAGGAAGAAGAATGAAGCGTGA
- Protein Sequence
- MFQQWDHSEDSMEQDQICEQCICRLRDASDFKRVVLDSQEELFQQIDAENETSIKEERLDEDFLIESKPESEGTVDTMYTDTEYTLDTADTLMSLKDETEYEEVEYLEDEDVGGASDVVDTDSSQPADQSRPAKQQKKPSKQDDDEEPPKRKWPKKLPKSERHKTYKQYSEIDLRKCLEEVRNNVLTAAEAALKYDIPKKTICAKIRVDPNDVGTDIQNSINNTTTSETVTTSRIEVPTLSYEAANETDSEAESQEVSNKYPLSHEKAKETDSDIESQEVPNKLQMLKHKNNLKMILKYSNATLIKGKSAAGYSCWFCDKHLNPEKLKKHNFEHGDVYDDAIKVKYVSDLIIKLDVTGLKCWLCEAEINSLEVLMGHLQEDHNKTIYTDIDNHFIPFKFDTDELQCVICAAEFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHRYRHKKGEYKCSQCPKVFDSPMKIREHEYVTHKLSNKKRKCGFCDEKFSSADLVKNHEARKHGVARSQLTCEACNRLFATEKGLATHKKRHHLLMRPIECETCGKGFYTRQELNWHSVTHTKTKEFHYVQIDNTTKSNNKRNLRKRPTSEIEATKVTETKKDRKSSEANLNDQERVENIKEHSKPDDQRFMYKHKANIKAILQNSNATLIKTYGRDGYSCNFCDFQAAKPFVLKQHNLKKHTNVGDEAIKTKYVSDLIIKLDATDFKCKLCKEPMNTLEEFMGHLNVLIDNTTKSKLGRSKTKLRTMPTIFKTKASFLDEKTKKLIELNKLKAKNLTKPVVTTVKDDVINITETKVIAIEINMEPKIEEMEAPVNADQVRTRYKAIVNDKFKKENKEPEKFEVNEMNKHKDNIKTILQSSNATIIKGFWGTGYSCTFCEEQREIPSELKLHNLEDHSNVGDEAIKVKYVSDLVIRLDITDLKCKLCNANAHRNKKATNNENGNAKSNVQKNTSQAEVEKDMNSIQKNRNFLANFKESVRSVLRCTNATPIRGYWGIGYACIYCKYQTSAISALKKHTLTTHSQNVDELDNVKYVPDMIIKLDITDLKCEICDCEIETLEEIMHHIKVVHSQPIHFDTTNHIVPFKFGKKDLACALCAKQFNYFKHLSEHMNEHFPNYTCKECNRFFINLRSLRTHAIRHLTGTFVCTFCPKIFDTRIKMKEHERVLHLKGSKNRKCGYCDERFMDAVRKTEHEVKEHGAPVRKFACKDCGKVFDSQRSVKNHMNHLHLQLRPHKCPECDKGFYNKNEMKRHRVKHTKIKEFQCSVCSKYYVSRASLRGHMKIHDSEKSYTCGEVDPTRENMYQLIKEIKAILTFTNATPYKSKNVRYYCAYCSTDGPYFEDPDDLRTHTRTEHVGHRTEKIEYAMRPYWMNEVIKLDIENLLCTVCCVVINNWNEMFKHLKDKHNIVLDQAYTRVIPYVLKTDLQCALCKEPFSNYLHLDGHMNAHYNNYVCDDCGDTFLAHNRLKQHVKIHNVGKYRCRFCQKVFTLQKYMRKHEELVHQQLSKFKCLYCPERFTGEYIRHLHCLEKHAEKIKTMTCEYCGESFTWKQYYMNHIRKKHENKKSYECDKCDKKFYGNYELKEHLLRHVGTKNFECQICHKKYVSMNSLKQHGKQHRKKNEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -