Basic Information

Insect: Fissipunctia ypsillon
Gene Symbol: -
Assembly: GCA_947568875.1
Location: OX387646.1:19357040-19372089[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.007 0.74 11.2 4.8 1 23 221 244 221 244 0.97

2 12 0.087 9.2 7.8 3.0 1 23 251 273 251 273 0.94

3 12 2.6e-05 0.0027 18.9 0.5 2 23 280 301 279 301 0.97

4 12 4.5e-07 4.7e-05 24.4 1.3 1 23 307 329 307 329 0.98

5 12 5.6e-05 0.006 17.8 0.6 1 23 338 360 338 360 0.96

6 12 3.3e-05 0.0035 18.5 1.4 2 23 367 388 366 388 0.96

7 12 0.0006 0.063 14.6 8.6 1 23 394 416 394 416 0.99

8 12 1.7e-09 1.8e-07 32.1 0.6 1 23 422 444 422 444 0.99

9 12 1.3e-05 0.0013 19.8 1.0 1 23 450 472 450 472 0.98

10 12 2.7e-06 0.00029 21.9 1.5 1 23 478 499 478 499 0.98

11 12 8.8e-05 0.0093 17.2 1.3 1 23 505 527 505 527 0.98

12 12 0.0046 0.49 11.8 2.5 1 23 533 555 533 555 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.007	0.74	11.2	4.8	1	23	221	244	221	244	0.97
2	12	0.087	9.2	7.8	3.0	1	23	251	273	251	273	0.94
3	12	2.6e-05	0.0027	18.9	0.5	2	23	280	301	279	301	0.97
4	12	4.5e-07	4.7e-05	24.4	1.3	1	23	307	329	307	329	0.98
5	12	5.6e-05	0.006	17.8	0.6	1	23	338	360	338	360	0.96
6	12	3.3e-05	0.0035	18.5	1.4	2	23	367	388	366	388	0.96
7	12	0.0006	0.063	14.6	8.6	1	23	394	416	394	416	0.99
8	12	1.7e-09	1.8e-07	32.1	0.6	1	23	422	444	422	444	0.99
9	12	1.3e-05	0.0013	19.8	1.0	1	23	450	472	450	472	0.98
10	12	2.7e-06	0.00029	21.9	1.5	1	23	478	499	478	499	0.98
11	12	8.8e-05	0.0093	17.2	1.3	1	23	505	527	505	527	0.98
12	12	0.0046	0.49	11.8	2.5	1	23	533	555	533	555	0.97

Sequence Information

Coding Sequence: ATGAATTCGGAAACTATCCTAGAAGACAGCACAAAGATAGATGTAGAAGAGAAAGGAACCAGAGAAGACTACATTGAAATAGAAATACCGTACAACTTGTACCAATACCTTAGCTCAGCCCACTGCAATGTTCAAAATATGTGTCGAATATGTCTCGCTACAGATAACGCGGTTTTATACCCATTAGTTACTACCAAAGAAAACAATGTTTTAGCTCATATGTTTACGACGTTTACTACTGTTCAACTGCTTCCAGGAGATGGCTTGCCATCAAGTATATGTGAGCCGTGTCAGGCTCAGATAGTGCAGAGCTATGAGTTCAAGATCAAGTGTGAGAAGTCAGACTGCATGCTCAAATCAATACTGAAAGGAGAATTCATGACCAAAGAGGAACTTCCTGATCATAGCATGGAAATAAAGCAAGAAGAAAACTTAGAGGATAATATTAATGGTGTAGATGACAGTAATATTTATTTAAATGACATTATTGATGTTAAACAAGAAGCAGAACTACTGGAAGATGTGCAATATTTAGAAGATCTCAATTATAACAGTGATAGTGGCAACCTTTGTATAGTACAAAAAACAAGGAAATCTAACCATCTAAAGGTTTCAAATAAGAAACTAAGAAGAAAACATGGAAATAAAGGAGAAAATACTTTCACCTGCAAGATTTGTTCTAAGAAATTCCAAAATGTGAAATCATTCCATGCCCATGTGAAGAGCAAGCATCCAAGCACCAAACATCTACATTTTTGTAACCAGTGCACAGACTCATTTAATTCTGAACACGATCTTAAAGTACATGCGTCAATACACACTAAAGGAAGTAGTTGGAAGTGTAACCAATGTCCTAAGGAGTTTAGTGCGCGCGCAATGCTCCGGCGCCACATATCGCGGCACATGGAGTCCAAGCGCTTCTCTTGCGAGGTGTGCAACAAGACGTTCACCGAACAGTACGCTTTACGACGACACACGCGCGTTCACACCGGCGAGATCCTTGAGAAGAAACATGCCTGCACTATGTGTGATAAGAGGTACAGTGAGAGCGGTCTCCTCGCAGCGCACATGTCCCGTCACATCGGTCTGCGTCCTTGCGAATGCAGTATTTGCGGCAAACGGTTCCCGTCGAACCGCCTGCTGTCGTCGCACCGGCTCGTGCACTCGGATCGCAAGCCGTACTCCTGCCAGTACTGCGATAAACGTTTCCGTCACGAATCGACGCGCAACACTCACCATCGTACGCACACTGGAGAGAAACCTTATGTGTGCTCCGTGTGCGGGAAGAGTTTCATACAGAACTCCAACCTCACGCTGCATATGAGGACACATACTGGCGAGCGCCCCTACTCATGTTCGGTATGTGATCGTAAATTCACTTCAGGGTCTACACTCAAAAGCCACGAACGGATACATTCTGGGGAACGACCATTCAGTTGTGAAATTTGTGAAAAAAGCTTTACGCGCAAGAACTTGAGCGCGCACATGCGCAAGCACACGGGCGAGCGTCCGTACGAGTGCGGAGTGTGCTCTAAGAAGTTTGCTAACGCCACGCGCCTGCGGGACCATCACCGTGTACATACGGGTGAAAAACCATTCGACTGCTCAATGTGCACGCTAAAATTCGCTACGAAATCTCAACAGTTAAAACATTCCAAAACCCACCTAGCGAAAAAGAAAAGAGCACTCGTGCATGCTTCAGATAAAGACGGAGACGGAGAGAACCGTGGACTAGTCATATTACAACATGTTGAGCCTGTTCCCATCATTACTGATAGAATTATGTTCAATAAGGAGCACGGAGAACTAATAACAGTCAATGAAAATTTAACCATTGACGAGTCGCCCGAAAATCAATCTAAAGAACTATCCCTAAACATCGTACAAGAAGTCCCATTAGAAGTGACAGGAGAATTAGTACTACAGGACGATAGTGACATGAAAGGAGATCTTTTAGTAGTCGATAATAGCCAAAGTAACTACCAAGGTGATAGTATATGTTTGAATACCAGCAATGTGAATATCATCGATGACGTAAACTACGAGGGTGATATGAACTTGGTGACGGTGAATGAGGGCGAAGTCAGCATTTCGACCTCGAACCTCGAAGGAACCACAGTCAAACTGTACCAGTTAGACCAAAGTTTAGTGCAAATACACAGCTCTGGGGGACATGTCACAATTAGTAAGATAACTAGCAAAATGACTGCTAACTTTTAA
Protein Sequence: MNSETILEDSTKIDVEEKGTREDYIEIEIPYNLYQYLSSAHCNVQNMCRICLATDNAVLYPLVTTKENNVLAHMFTTFTTVQLLPGDGLPSSICEPCQAQIVQSYEFKIKCEKSDCMLKSILKGEFMTKEELPDHSMEIKQEENLEDNINGVDDSNIYLNDIIDVKQEAELLEDVQYLEDLNYNSDSGNLCIVQKTRKSNHLKVSNKKLRRKHGNKGENTFTCKICSKKFQNVKSFHAHVKSKHPSTKHLHFCNQCTDSFNSEHDLKVHASIHTKGSSWKCNQCPKEFSARAMLRRHISRHMESKRFSCEVCNKTFTEQYALRRHTRVHTGEILEKKHACTMCDKRYSESGLLAAHMSRHIGLRPCECSICGKRFPSNRLLSSHRLVHSDRKPYSCQYCDKRFRHESTRNTHHRTHTGEKPYVCSVCGKSFIQNSNLTLHMRTHTGERPYSCSVCDRKFTSGSTLKSHERIHSGERPFSCEICEKSFTRKNLSAHMRKHTGERPYECGVCSKKFANATRLRDHHRVHTGEKPFDCSMCTLKFATKSQQLKHSKTHLAKKKRALVHASDKDGDGENRGLVILQHVEPVPIITDRIMFNKEHGELITVNENLTIDESPENQSKELSLNIVQEVPLEVTGELVLQDDSDMKGDLLVVDNSQSNYQGDSICLNTSNVNIIDDVNYEGDMNLVTVNEGEVSISTSNLEGTTVKLYQLDQSLVQIHSSGGHVTISKITSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00375561;
90% Identity: iTF_01526323;
80% Identity: -