Fyps030015.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- TIGD1
- Assembly
- GCA_947568875.1
- Location
- OX387650.1:1758115-1759158[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 5.5e-05 23.6 0.0 2 44 11 53 10 54 0.93
Sequence Information
- Coding Sequence
- ATGATAAAAAGAAAGTATTATTCTTGGAGTAAGGAAGATATGGAAGAAGCGATTAGAAAATATAACAATGGGGACTTAAAATTCAACGAAGTTTGTCGTGTATTTAAAATACCGAAACCGACATTTAGACGACATTTAAAAGGCTTGAATACATGTAAAAGAATTGGACGTCCGAGTGATTTAACGGAGGAAATGGAAGCAGAACTAGTCAGACATGTTCTTTTGTTGGAGTCTAGATTTTTCGGCTTGACCATTACCGATTTACGGCGCTTAGCTTATCAGTTAGCAGAAAAATACGGACTGAAACACAGATTCAATAATGAATCGCAGCTGGCTGGTTGGAAATGGTATTATACATTTATGAAGAATCATCCAGAAATATCCTTACGAACCCCAGAACCCACGTCTATGGCTCGCTGTAAAGGATTTAATAAAGAAACGGTGATGGCGTTCTTCGACAAATATGAGTCCATCTTAGACGAAGGTCATTTTACAGCCGAAAAAATTTATAATATGGATGAGACAGGTTTGAGCACAGTTCATAAGCCTTCAAAAATTTTGGCTCAAAAAGGGAAACACCAGGTTGGAGCTGTCACTAGCGGTGAACGTGGTGTTAACACAACATGCATTTGTTGTATGAACGCAGCTGGAGAATTTGTGCCTCCCATGCTTATATTTAAACGTAAAAGAATGACAGAGAGCTTGATGCGTGGAGGGCCACCGAGCACTTTGTATGATTGTTCTGAAAGCGGATGGATTGTTAGCACCTTATTTACCAAATGGCTTAAACATTTTATAAAATGTCTAAGGCTGCAAAAATCACAAGAAAATCAGATTCTTCTCATCCTAGATGGCCATTCGACGCACACGAAAAATATTGATGCAATTAATCTCGCTAGGGACTATGGAATTATTATGTTATCTCTTCCGGCCCATACCACACATAAGTTGCAACCATTAGATAGGTCATTTTTCAAAACTCTAAAACAGAATTTTAACGCTGCTTGCGTATCATGGATGCGAAACCACCTGGATCTGTCATAA
- Protein Sequence
- MIKRKYYSWSKEDMEEAIRKYNNGDLKFNEVCRVFKIPKPTFRRHLKGLNTCKRIGRPSDLTEEMEAELVRHVLLLESRFFGLTITDLRRLAYQLAEKYGLKHRFNNESQLAGWKWYYTFMKNHPEISLRTPEPTSMARCKGFNKETVMAFFDKYESILDEGHFTAEKIYNMDETGLSTVHKPSKILAQKGKHQVGAVTSGERGVNTTCICCMNAAGEFVPPMLIFKRKRMTESLMRGGPPSTLYDCSESGWIVSTLFTKWLKHFIKCLRLQKSQENQILLILDGHSTHTKNIDAINLARDYGIIMLSLPAHTTHKLQPLDRSFFKTLKQNFNAACVSWMRNHLDLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00794319;
- 90% Identity
- iTF_00120449;
- 80% Identity
- -