Fyps027132.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- -
- Assembly
- GCA_947568875.1
- Location
- OX387669.1:3713544-3713996[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-09 2.6e-06 27.9 0.0 4 39 18 52 15 56 0.84
Sequence Information
- Coding Sequence
- ATGCCAAGGAACTGGACAAGGAAGACGTCTAAAGCGAGCTGGACTGCAGGTGACCTGCAGGCAGCTGCTGTACGTATAAGAGGAGGTGTGTCAATACGCAAAGTTGCCGAGGAAACCGGTATACCTTTCAGCACGTTACAAAGAAGGATAAAGAAAGATGAGTTCAAACCTCCAAAACTAGGAAGGCATACGGTTTTTAATGAAGACCAAGAAAATATACTTACAGAGCGTATTTTACAATTAAGTAACATGTTTCATGGTTTACATAAATTTTCACTAAATATCCAGCAAAACTCCCAGAACGAGCGTGAACATTCTGTGTGCGCAATATGCCTTGAAGAGGGAAAACCGAGAGAAATCTGGTACCGTTGCCGTCTCTGTGCTGGGTGGGCCCATGAGGCATGTACAGGATGTGATGATCCAAGTCGCTATCGCTGTGATTTTTGCATTTAA
- Protein Sequence
- MPRNWTRKTSKASWTAGDLQAAAVRIRGGVSIRKVAEETGIPFSTLQRRIKKDEFKPPKLGRHTVFNEDQENILTERILQLSNMFHGLHKFSLNIQQNSQNEREHSVCAICLEEGKPREIWYRCRLCAGWAHEACTGCDDPSRYRCDFCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00726271; iTF_00726272; iTF_00237459; iTF_00237452;
- 90% Identity
- iTF_00726271; iTF_00726272;
- 80% Identity
- iTF_00726272;