Fyps023818.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- -
- Assembly
- GCA_947568875.1
- Location
- OX387672.1:3966593-3968489[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-09 1.8e-06 28.4 0.0 3 37 17 51 15 57 0.93 2 2 4.2 1.3e+03 0.0 0.0 22 30 114 122 100 123 0.74
Sequence Information
- Coding Sequence
- ATGTCTCGGAAGTATGAAAGAACGACACTACGAGCATCATGGAGTGCGGACGACTTATACAAAGCCATGCGTAGTGTCCTTAGCAAAGTAATGGGTGTTAATGAGGCATCCAGAAACTTTGGCATACCGTCTCGAACTCTAAGAAGACACATTTTATCAGGAAAATCAAAGGGCCCTCTAGGACGCAAACCAGTATTTTCTGTAGAATATGAAAAAAAAACTGGTTGCCCATATAAAGAAATGGCAAAAACAAGTTCAGAATCAGCCGGAAATGTATGGTTTTCGGGATTCATGGCTCGCAACTCTGAATTAAGTCAAAGAAAATCAGAAGGCTTGTCACTTGCTCGAGCTTATGGAGTTAATAGAAAAGATGTACAGGATTTTTTTGATTTACTAGCCAAAATCTACGAAGAAAATGATTTTGCAAATCACCCCGAAGATATTTTCAACATGGACGAGTCCGGCATACAGGTGAACAACAAGCCGGGAAGAGTAATTGCCACAAAGGGAGCCAAAGACGTCTACACGCTCACTAGCTCAGAAAAGGGTGAAAACGTAACGTCACACTATACGCATGCTCTGCAGCCTCTTGGTAGAGCTTTTTTTAGGCCATTGAAGGTATACTTTGCTCAGGAAGCGAAGACATGGATAGTCAGGAACAAAGAGAAGAAGTTGACACGCACAGCTTGGGGCAAAGCTGCCACTGTTTCCAACGGTGTGTCAGCTTTAAAATCATGTGGAATTTATCCTTTTGATCCGAGTGCCATTTCTGATCACTATTTTTCACTATCTGATTCGCTGCGAGACCAAAATTTAGTTCTTGAAGATGAGGATGGGACGTCAAGAGAATCTCTGACATTACTTCAGGAATATGACGATAGTGCGTTTGATACAATCTGTTCCTCACCGCAGCAGGTCGTAAATGATTTAGAGCCCAGGACATTAGGATCACCACCTGTCGTTGTGACTAAGTTCCAACCTGAGCCAGGTCCTTCAGGACTACATCTAACTAATCCAAATTACGTAGATAGTTTGATGGAAGTAGTAACTGAACATTCATTGCCTGTGCAAGATGCACCTGTAGCAGAAGAGTTTGACCAAATGAATGTGATATTGCCAAAGACACCACAAAAATTTCCGATACAATTTCGTATCGAGAGTGAGGCGTGTCTGACTATTGCGAAGTCTAATCTTATTGATTTGATTGAACAAACCCCTGAAAAGCAAATAGGATCTACTGAGTCTGAAGCAACACCATCCAAAGTTTTGAATGAAATCCATCCAGTGCCTAAACTTCCAGTAGTATTGTCTAAGAGAAAACAAAAAGCTGTTATTTTAGCTTCTGATGAAAATATAGAGAAACGGAAAGTAATTGCTGATAAAAAGAAACCAGCAGCTGGGAAATTAAAGCAGGCTAAGACCACAAAAAGAATTAAAACAGTGAAAGAAAAAGATGATGTAAAAAAGAAACAAAACGGGGGGTATAAAGAAGCCAAAAAAAGGTCCTGTCAGAAATAA
- Protein Sequence
- MSRKYERTTLRASWSADDLYKAMRSVLSKVMGVNEASRNFGIPSRTLRRHILSGKSKGPLGRKPVFSVEYEKKTGCPYKEMAKTSSESAGNVWFSGFMARNSELSQRKSEGLSLARAYGVNRKDVQDFFDLLAKIYEENDFANHPEDIFNMDESGIQVNNKPGRVIATKGAKDVYTLTSSEKGENVTSHYTHALQPLGRAFFRPLKVYFAQEAKTWIVRNKEKKLTRTAWGKAATVSNGVSALKSCGIYPFDPSAISDHYFSLSDSLRDQNLVLEDEDGTSRESLTLLQEYDDSAFDTICSSPQQVVNDLEPRTLGSPPVVVTKFQPEPGPSGLHLTNPNYVDSLMEVVTEHSLPVQDAPVAEEFDQMNVILPKTPQKFPIQFRIESEACLTIAKSNLIDLIEQTPEKQIGSTESEATPSKVLNEIHPVPKLPVVLSKRKQKAVILASDENIEKRKVIADKKKPAAGKLKQAKTTKRIKTVKEKDDVKKKQNGGYKEAKKRSCQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -