Fyps030742.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- -
- Assembly
- GCA_947568875.1
- Location
- OX387650.1:14579068-14579946[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-10 9.4e-08 32.5 0.0 2 41 17 57 16 59 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGGACATATGTACCAAAAAACACAACTAGACCAGTTGTGAATGAAGAATCTATGCAGTCAGCAATACAGGATGTTGTGCAAGGAGTATTGTCATATAGAAAAGCTGCGGACAAGTACAATTTGAAATTGTCAACATTAGAAAGCCGAGTAAAAAAATACAAGAATAGCAATGATGCTGAAGGGTCAAGCAACCGTACATTTGACTCTAAATATACAAGTTTCCAAGTCTTTTCTATTGAAGAAGAAAAGCTGCTAAATGATTATATCATCAAATGTTGTAAGATGCATTATGGACTTACGACGATTCAAACAAGAAAGCTAGCATATGAGTACGCCAAATCTTTGAGTTTGAAATATCCAGCAAAGTGGGAAGAAACTAAGATGGCTGGGAAAGAATGGATGTATGGTTTTCGCAGAAGAAACCCGGAACTCAGTTTACGCAAACCCGAAAACACTAGTGCAGCGAGCTCTTTTGCGTTTAACAAAACTTCGGTTACCGAGTATTATACCAACTTGAAGACAGTGTTGGAGCGACATCCATTAACTGCTGACAGAATCTTTAATTTCGACGAATCAGGTGTATCTACCGTTCTAGCTACTCCCAAAGTCTTGGCTCCAAGATGTCAAAAACAAGTCGGGCAAATTGTATCAGCTGAAAGAGGCGAGCTCGTAACTTTTGGTGGTATTATATCTGCCAGTGGAAATACCATTCCTCCACTATTTGTGTTCCCACGCGTTCATTATAAAGATAATTTCCTCGAAGGAGCACCCGAAGGAAGTCTCGGCGCTGCAAATAAAAGTGGCTGGATAAATAGCGGTACATATATTCGTCTCTGTTTTAAAACATATCCAGAAGCATACACTCTGCACTAA
- Protein Sequence
- MVRTYVPKNTTRPVVNEESMQSAIQDVVQGVLSYRKAADKYNLKLSTLESRVKKYKNSNDAEGSSNRTFDSKYTSFQVFSIEEEKLLNDYIIKCCKMHYGLTTIQTRKLAYEYAKSLSLKYPAKWEETKMAGKEWMYGFRRRNPELSLRKPENTSAASSFAFNKTSVTEYYTNLKTVLERHPLTADRIFNFDESGVSTVLATPKVLAPRCQKQVGQIVSAERGELVTFGGIISASGNTIPPLFVFPRVHYKDNFLEGAPEGSLGAANKSGWINSGTYIRLCFKTYPEAYTLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634329; iTF_00424578; iTF_00424579; iTF_00998532; iTF_01287128; iTF_00932409; iTF_01157611; iTF_01043567; iTF_01300790; iTF_01300795; iTF_01430752;
- 90% Identity
- iTF_00932409;
- 80% Identity
- -