Fvir019787.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- gata1-a
- Assembly
- GCA_900060175.1
- Location
- FIZR01016157.1:30202-38112[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 6.4e+03 -3.0 0.5 21 26 56 61 54 62 0.80 2 2 4.2e-15 1.4e-11 43.9 2.8 1 34 611 643 611 644 0.98
Sequence Information
- Coding Sequence
- ATGACTGCTGCGCATTTAAATCTTTATCAAGTTTGTCGCCTTTGTTTGTGCGAGCTGAATGGCTCGTCATTTGTACCGATATTTGATAACAAAGATAGTAATTTACCATATAAGATAAAGTCCTGCTTTTCCATTTCTGTTGATGAAACAGATCGTTTACCTAATGTGTTATGCCCTGCTTGTACCAGAGATGTAGAACgattttacaagtttaaagaaaaagttatcaaaaacaATGCTTTCCTCAAATCGTACGTCTTTCAACGAGACCGCAAAGCCGCTCAATTCTTGGGTCGTGGTAAAGATGAATCGAACACCGTTATTGAAGCTTCTACGATGAAAAAACGCACCGCCGTTGGTACAACTGCAACAACATCGGTGAAAGGCAAACGTACGCCATCCAAAGCGAAATCCGGCGCCGGCGGTGAATATTCAACAGATTCTACAGCAACGGCCGAATGTCTACCGTCGTTAAATAACTATGATAACTGCGAAATATCCAATACATTCTTTGACAATAGCAACAAAGTAAAAGTGGAAATCATTCCTCAAGTAGACAACGATATGTATTCGTCGACTAGCGCCATTTATGCTAACGATTCAAAAAGCAATGTCGTCGAGATGTGGCCATCGTCCATGTCCAACGAAGAAACTTCGTCTAATTTTCGCAACGGTAGAAATATCGAGGAAATAGCTACCACTACTATCGAAAGCTCGTCCAAATCTCCAGACTATACGAGCGTTATACGCCACAGCAGTGACGATTACGGTAACAGTAATTCGTCGTACGATAAATACATCAGCGTACACGTCAAAGAAGAGATTTGCAAAGAGAACTCCGGTGAGGAGTACGACTCGGAAGATACGAAATCAGCTGCCTCACTGACGTTCCGCGAAGAAGATGAAGATAAGTTGATAATCGACGAAGAAACGATGGAAGTTAAGGCGTATCGCGAGGGCGTCAAAACATCGTTAGTATACcgagtttttttagtttggaaATCGAAATGCCGATTAAGGGATAGCTGTATACTGTTGCGCACATTAATCTCCACATCGAACGCCGCCAATCAAGTAGCTCAGTCGAATCAGGCAGTAAGGAGcgaaactatcaaaaaaccgGCTACTTTTTCTCCGCAAATATTAGTCAGTGATATGACAGGTAATTCGCCACATTCGCAAAATTCGCCCAGCGGTGGTTCAAACACACCTACCTCAGAGAAAAGCAGCACCAGGCGAAAACAGCGTTGCCCTACAAAATCGGCCAGCGAGACTACTATTTTACCGGATGCCGGAGACGACGAAAGCGACGAAGATGCGGCCGAACTAGCTCCGCTCAGTGAACAACAGTCGCATCAGTCGATGATGTACCAACAGGAAATCGTTAACATCAGCCCGGTTACGGTGACATGTACGTCGAACGGAAGAGAAGAGATCGTCGGCTACAATCAATCTCAATTCTTAGACGAGGATGAATTACAGGTGTTATCCAGGCACAGTTCGCCGGCTACAACACCGCCCATGGTAATGCCTTCGCAAGCCGAAAGATTGCACAAAGCCTGCGACGTGTTACTAAGAGCGGCGAGTAAAATACAAGACCTTCCGCCTGGTATACAGCAAGAAGAAGTCGTCGTCGAAGAAGAAGAGAGTATAACCTTGTATCCTAATAGTACGCAAATCGATGGCCAGAGCGAACAAATCACCATTCGCCATAATCCGGTGCCGTTGTACGAAATAAACTTCTCTTCGGTCAATGCCATTAACGAACCGCGCGTCACTAAGAAAATCAAGTCGCGCGAAAAAATTCAGAATATGTCTCAACATAAGGAATGTAATAATTGTCACGCCGTACAAACCACCATCTGGAGACGAGACAGATTCGGCAATATCGTCTGTAACGCTTGCGGATTATACTACAAATTGCATAACTACGATCGTCCTTGTAGAATGCGCCGCGACGAGATACACAAACGTAATCGTAAAAGAAACGCCAACGAAAATAAAGCGAAGAAAAGCAAACGTAATTCGAATAGCGGTGCGTTTGAATTGAACGAATCGTCGAAAGAGCAAGAAAATTCTAGCGGTTCGTATACACCACCGAGTAACTCTTATAACGATAACGCGATGACCACCTCCACATCTACGAATCACGTTACCGTGTCCGATCTCTACCATCCTTTCGGCCAAATTAAGAAACGACGCCGAACCTCGGCGCCCGGTTGCTCTTCGACGACCACTACAGTCGTCATAAAAGAAGAACCATCGGAGGCCAGTCAGCAGCCCACGTCGGACGTTGAACAGACCATCGAAGAAATCAGCGTCAATGGTACCGAAATAGCAGTCGCTTTGAATAATCATCTTTACAACCAGCAGcagcaacagcaacaacaacaacaacaacaacaacaatctGCTGGTGATAAATTGAACGTATCCGCTTTTCAGCTCTCTACGCATTTTATGCCAATAAATGGAAAAGTCTACGAAGATTTTTCTAACGAAAATTCAATGAGCGAAACACCCTTGAATCTGGCAGCTGGTGGTAGTCATTAG
- Protein Sequence
- MTAAHLNLYQVCRLCLCELNGSSFVPIFDNKDSNLPYKIKSCFSISVDETDRLPNVLCPACTRDVERFYKFKEKVIKNNAFLKSYVFQRDRKAAQFLGRGKDESNTVIEASTMKKRTAVGTTATTSVKGKRTPSKAKSGAGGEYSTDSTATAECLPSLNNYDNCEISNTFFDNSNKVKVEIIPQVDNDMYSSTSAIYANDSKSNVVEMWPSSMSNEETSSNFRNGRNIEEIATTTIESSSKSPDYTSVIRHSSDDYGNSNSSYDKYISVHVKEEICKENSGEEYDSEDTKSAASLTFREEDEDKLIIDEETMEVKAYREGVKTSLVYRVFLVWKSKCRLRDSCILLRTLISTSNAANQVAQSNQAVRSETIKKPATFSPQILVSDMTGNSPHSQNSPSGGSNTPTSEKSSTRRKQRCPTKSASETTILPDAGDDESDEDAAELAPLSEQQSHQSMMYQQEIVNISPVTVTCTSNGREEIVGYNQSQFLDEDELQVLSRHSSPATTPPMVMPSQAERLHKACDVLLRAASKIQDLPPGIQQEEVVVEEEESITLYPNSTQIDGQSEQITIRHNPVPLYEINFSSVNAINEPRVTKKIKSREKIQNMSQHKECNNCHAVQTTIWRRDRFGNIVCNACGLYYKLHNYDRPCRMRRDEIHKRNRKRNANENKAKKSKRNSNSGAFELNESSKEQENSSGSYTPPSNSYNDNAMTTSTSTNHVTVSDLYHPFGQIKKRRRTSAPGCSSTTTTVVIKEEPSEASQQPTSDVEQTIEEISVNGTEIAVALNNHLYNQQQQQQQQQQQQQQSAGDKLNVSAFQLSTHFMPINGKVYEDFSNENSMSETPLNLAAGGSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00194848;
- 90% Identity
- -
- 80% Identity
- -