Fvir008169.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- GATA-B
- Assembly
- GCA_900060175.1
- Location
- FIZR01016258.1:97425-101528[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.57 1.9e+03 -1.3 0.3 18 25 131 137 121 137 0.78 2 2 1.2e-17 4.1e-14 52.0 4.6 1 34 236 268 236 270 0.96
Sequence Information
- Coding Sequence
- AtggataaatttaattatccaGCAGACAATTCGAACCTATTGAATGCGAATGTGAAGAATCTTCCACAACCATGGCAGAATTCACCGATGGAAAATGGacattcttttcaaaattcatctcgATTTATTAACAGCATTCGTGGAAATGGAGACTTCCAACATAAGTTTGGCGGAGGATTGCCGTACTCCAGTTTTCCATGGCATAACATCGTTGGTTATGATCAGGATTTATTCAATTGCTCCAGTTTAGTTAATTCGAGATCAATGTCAGTAATACAATCATCACCTTTTCCAACAATCGGTTCATTTAACAGATCTCAGGATATGAATTTATACCGCAAGAACATCACACCGAATCTGAAATCATCTCAAAGCAATTCTTTATACGAGAACAATAATTTATGCAACAATGTGAAATCTTACGACGCAGAAAACACTGCAGCTGGTTTCCCATTTACCACATCTCAACTCTCATCGAACATTCCTACGTATTTGAGCACTCCTAGTAATAATTGTATAAATTCCTCGTCGTCGGTAGCTGACGCAGCATTTCAAACTGCCTTAACTATTGCAGATGGAGACGGACCTGATTCTTCATCACCTTCTACTACGCAGAATGTCGGTAGAAATAAGCCGTGTATTCGTTACGTTGGATCTGCAAATCATAGAATCCGTTCGTCGAAAATGTTTATCGAACATCGATTGTGCTCAAATTGTGGAACAAATGAGACGCCTTTGTGGCGCAGAAACAAAGCTCGTGATATAGTGTGTAATGCTTGCGGACTCTATTTCAAGACACGTAAAACAGATAGACCTCAGACCATGAGGAAAGACAGctaccaaCGAAGGAAAAGCAAACCGAAAAAAGATAAAGGAAGTCATATGTCATTGGAATag
- Protein Sequence
- MDKFNYPADNSNLLNANVKNLPQPWQNSPMENGHSFQNSSRFINSIRGNGDFQHKFGGGLPYSSFPWHNIVGYDQDLFNCSSLVNSRSMSVIQSSPFPTIGSFNRSQDMNLYRKNITPNLKSSQSNSLYENNNLCNNVKSYDAENTAAGFPFTTSQLSSNIPTYLSTPSNNCINSSSSVADAAFQTALTIADGDGPDSSSPSTTQNVGRNKPCIRYVGSANHRIRSSKMFIEHRLCSNCGTNETPLWRRNKARDIVCNACGLYFKTRKTDRPQTMRKDSYQRRKSKPKKDKGSHMSLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -