Fvir011490.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- pnr
- Assembly
- GCA_900060175.1
- Location
- FIZR01027785.1:1-5819[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-19 2.9e-15 55.7 3.2 1 34 10 42 10 44 0.97 2 2 1.6e-19 5.3e-16 58.1 4.5 1 35 102 135 102 136 0.97
Sequence Information
- Coding Sequence
- atggatttttacgCCGAAGGCAGAGAATGCGTGAATTGCGGAGCGATTTCGACGCCGTTATGGCGACGCGATGGCACAGGACATTATTTATGCAACGCTTGCGGATTATACCATAAAATGAACGGCATGAATCGCCCACTTGTCAGGCAGCCTAGAAGGCTGGTCATGGCTTCCGGTCCAGGGGCTGGTACAGGGGATTTCTACAAGAATAATGGCTTGTATGTTCCTAACCCCTTTCCTCGAAGCAGTTTCGAAGAGAAATCACCACGAAGActgACTGCTTCTCGTCGAGTAGGATTAACTTGCTCGAATTGTCACACGCTTACGACATCGTTATGGCGTAGAAACCAGGTTGGCGAACCTGTATGTAACGCTTGCGGTctttattataaattacacAACGTAAATAGGCCATTAACCATGAAAAAAGATAGCATACAGacaaGAAAGAGAAAACCAAAGGGCGGTAAAGGAGAGCATTCGGCGCCGAAGCAAATCAAACTCGAGCAAAATG
- Protein Sequence
- MDFYAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVRQPRRLVMASGPGAGTGDFYKNNGLYVPNPFPRSSFEEKSPRRLTASRRVGLTCSNCHTLTTSLWRRNQVGEPVCNACGLYYKLHNVNRPLTMKKDSIQTRKRKPKGGKGEHSAPKQIKLEQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00194844;
- 90% Identity
- -
- 80% Identity
- -