Fvir008091.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- Zfy1
- Assembly
- GCA_900060175.1
- Location
- FIZR01027725.1:14261-20653[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00067 0.06 14.0 1.7 1 23 314 337 314 337 0.95 2 23 0.022 2 9.2 0.3 3 23 408 429 406 429 0.92 3 23 0.074 6.7 7.5 0.8 2 23 436 458 435 458 0.96 4 23 1.3 1.2e+02 3.6 1.7 1 23 469 491 469 491 0.92 5 23 0.0031 0.28 11.9 3.0 2 23 517 539 517 539 0.95 6 23 7 6.3e+02 1.3 0.8 2 23 583 606 582 607 0.88 7 23 1.4 1.3e+02 3.5 0.3 2 23 616 638 616 638 0.90 8 23 0.11 9.9 7.0 0.0 3 23 646 667 644 667 0.92 9 23 0.0014 0.12 13.0 0.8 3 23 678 698 676 698 0.96 10 23 1.4 1.2e+02 3.6 0.1 2 23 718 741 717 741 0.92 11 23 0.0016 0.14 12.8 1.4 1 23 744 767 744 767 0.96 12 23 0.032 2.9 8.7 1.5 2 23 774 796 773 796 0.95 13 23 0.00048 0.044 14.4 1.8 1 21 832 852 832 853 0.95 14 23 0.001 0.094 13.4 0.5 1 23 881 904 881 904 0.96 15 23 8.4 7.6e+02 1.1 0.1 9 23 920 935 907 935 0.74 16 23 0.0092 0.84 10.4 0.1 2 23 942 965 941 965 0.93 17 23 0.00014 0.013 16.1 0.7 1 23 972 995 972 995 0.96 18 23 0.052 4.7 8.0 0.1 1 23 1032 1055 1032 1055 0.95 19 23 0.0017 0.15 12.7 0.5 2 23 1061 1082 1060 1082 0.94 20 23 0.0055 0.49 11.1 0.9 1 23 1194 1217 1194 1217 0.98 21 23 9.6 8.7e+02 0.9 1.1 3 23 1289 1310 1288 1310 0.87 22 23 0.78 70 4.3 3.2 1 23 1316 1339 1316 1339 0.95 23 23 0.00023 0.021 15.4 1.9 1 23 1382 1404 1382 1404 0.99
Sequence Information
- Coding Sequence
- ATGCAAGAAATTTGTGAATCTGAAATTAAAGCgaattttcacgaattatGCCGGCTGTGTGCATCAATCGACaatgtgaaaattggaatatttAGTGAAGAAGGAATCAAAAGGCAACTGcgtaaaaaaatctcaacgtGTCTTCCCTTCAagGTTGAAGAAAATGACGGTTTACCAAAATCACTGTGTTTCAAATGCGTGTACAATTTAGAAACGACCTACGAGTTTAGGTTAAAATGCATACAAGTGAATCGAAGTTTGGAAAAACATTTGTAccaattggaaaGGGATAAACAATCGAAAAATGTGATATCTGCTCGATCGTACAAAATTCATCCAGAGGTTTCTATTTTCGCAATATCAACGGAGTCGagtgaagaaaaacaaaatgaagtcAAAACGGACGTGCCTCCATCCATGGAATGTGAAGAAGAATCGCCAAATCCTTTGGATTTTCTTGAAGTTGGTGTAAATTCAGAAGAGAGTTCGAATATCCGTCCTAAATCCAATCTTCAAGATGGCAAgaaatctcatttttggaaaaccgATCGAAGATGGTTATCCGTTGAACATAAACCGCTTCATAATAAAGCAACGACGCCAAACCATTCAACCAGAGTCAACATGAAGTATTTCGACACGTCAACGCCTGATGATAATGGAAGTCGACGCAAAAGCTGCAATCCGCGAAGGATTGCCCGTGAAAGTGAAGAATGCGTTGATTATATCGGTAGCAGCGTTATCGGTACCAGTTTTCCTTCGTCAGCGGTAACCGATGCAGTTGCAGTTACAACGCAGTTTGTGGATCGAATGATCGTCGATAACATTACGGATGACGTTAATTCCAGCCAAAAAGCCAAAGGCAACGAAAAAAGTGAAGGCCAAGCCGTTGATGAGGACGAACTGCCTTCGTCCTTGTCGTCCCGTCAGCATGAACGATTCACGTGTTTATTATGCGAGAAAAGCTTCAATCTGCGTTCGTCGCTGAATAAACACTTTTCTTCAATACACGGCATTGAGCCGTACGAAGTGTTATCGtcaacgtcgtcgtcgtcgtcgtcgtcgttgtcgttgtcgtcttcATTGCCAGCGCGAGCCTCCCTACTTTCGACGTCGTTCATTACGCAGCTCGcagaaacaacaacaacattatCATCCGATGCTGCGTCTAAAAATGAAGACGATTTGGAAAACATGATGGAACAAGAGACGGTGATATTTTGCGAGGTGTGTCGTCGTGAATTTCAAGATCGCGCCAGTTTGTGGCTGCATATGGTGCATGCGCATCGCGAAGAAGCGAGCGTATCGTGCGGTatttgcttgaaaatttgttgcGATAACATTACATTAATCGAGCATGTGAATACGGCGCATTCCGGTGATAAGGCGGTCGTACAGCGTCGTTACTCGTGTCAAGTGTGTGGTCGGCAGCACGATTCACGGCAGAAATTGCTAAAACACGCGACGTTGCACACGCTGATCGATAATCAGGGTCAGACCATTCAGCCTGAGGAGATGGTGTCGCTGAACAATGCGTTCGCGCCGCGCGAGTGTCCCATATGCCGAAAGCGGTTTTTCAACGAAGAGAAGCTCAACCACCATACGCAGAATTTTCATAACGATACGAACGACACGACGTTGTCGCCGTCAACCGTGTACAAGTGCGAATTGTGCGCTTCGGCGCATGCCACGCGCATGGACCGCTGGTGGCATATGTACTACTCGCATCTGGGTGACGTGCGGGTTACTTGTCCGCGTAAAAACtgtcgaaaaatatttgtatcgGTAACGTTGAAAGAGGAGCACGCGAAAGCGCACCACGAAACGCAAGGCGACTTTACCAATACGTGCGAAATATGCGGCAAATTGTGGGAGTCGCGTACCGTCTTCTACAAACATATGATGAACGTGCATCCGAAATGTTTGCCCACCATTTGCGGCATTTGCATGAAGATTTTCAGTAACGTGCCGGAGCTCAGGCAACACGTGCAAGCCGACCATCCGCCGCTCGAGGAGAGCGGCGGTATTTGCTGCGACGTATGCGGACGACCGTATGCCGAACGTTCCAAAATGTTGCGTCATCGACGCGTGCACAACGTTACCGATGGCGTTCCAGCCGCCACCAGTACTGTGAAGAAAAAAGACGATTTGGTGTGCAGCTTCTGTCCGGAAGTCAGCTTCGATCGGTACGAAGATATCGCTCAGCATCGTCGAACCGTTCATCAGCTATTCGTTTGCGATCTATGCCCGAAATTCTACAACGGTAACAACCACCTTTGGAAGCACGTCAGCAAGCAGCACAAAGGCGATCCGAACGTCACCTGCAATCTGTGTTTGCGCACGTCCGCCAGTCGAGCGCATCTCGAACGCCATAAAATCAAATACCATTCCGATCCGGTCGATAAGCTGCTGAGTAAACAGCAACTAAGTTACGCTGGTGCGAGCGCAATCGCGGGCGCCGCCGCAATAACGGCAACGCTACCGCACCAGCCTCATAAGTGCAGTCTATGCGGTAAACTGTTCCGCATACGAAGTTTACTTAAGAAACATTTGAAATCGTGCAAAGGCGTCAAAGCGCTAGGAGCGTCCGCTGCGGCTGCCGCCAGCCTAACGGCCAAAGTGTTGCCGGTGAACGGTGTTTTCCCTTGTTCCAAATGCAGCAAGGTGTTCCCGTTGCAAAGTGTACTCTCGAAACACGTGAAGAATTCGCACGCCCAGCACGCCTGCGAAGTATGTCAAACGGAAGGCGAAGTCAGCGCTTACGATACGAAGAAAGGCTTGCTGCAGCACATACGAGAACGGCACGCTGACAACTACGAGTTGGTGTGCGATGTGGTCGGTTGTGGCAAGGTGTTACGTTTGAAGGCCGACTTGAAGAAGCACAAATTGGAACATCAACGAGGTTACTTTACGTATATTTGCGAAATCTGCGGCGACATGTTTtcgaatcgtaaaaaattacgcaagCATCTGGTTACCTATCACAAAGCGGACGTAAAGTATTTGTGCGCCATTTGCGCTTCCATTTATCAATCTGTGGACAAGCTGGTGCAACATGTGCACGGCGCGCACTCTTTTGTGCTGCATCGGCCGTACACGTGTCAAATTTGCGGTAAAAATTGGACCGTAAGTAGTAAAGTAGTCGACCACATTTCCAAAGTACACGGTACAGAATACAAGCCCTGCAGAATTTGCTGGAAAGTATTCACAGACGAAGAAACCTTCCAGCAACACACCGACAACCATCCTCCGGTCGAAGAAAAATCCTCCTCAGTCAATAACGCTTCTACCACCAACGGAACCGCACCGTCGGCCGTAGCCACCGTAAACGATCACGTCGCGTCTCAATCGTCGCCTTCCCATTCGGAAGCGTGCTCTTCTTTTTCGGCTGCCGGGTCCGGCGCGTCGGAGACGGGAGGTGAGGATAATCGCTCGAGATTACGGAAACGAGACGAATGCGAGGCTGGTGTCGTCGGAGGAAGCGACGGCGCGGGTACGAAAAGGCCGTTACCGTCCAACGAAGCAGATGCGTCGTTAggcgatgaaaatgaaaacgcgAGTAAACGACTTCGACGTAAATACAAATGCGTTTGGTGCAAGGACACGTTCCGCTCCATGGACGAACTGAAAGAACATAAACAGACCGAACACGCCAACAACCGCCATAGCGGCGAATCGCAACAACAAACGCCGCTACCCAAAGCCGAACCCGGCGCGGTTGCGGTCGCAGAATCGAATACGGAAACGGAAACGATTTCGTCGTCGGACGCCAGCGCTGTTCGCGCCCTCGAACTTGCTGAGAATCAGCAGCAGCGATTCGATACCAACAAGTCGGAAAGATGGACCGATATCCGTCCCATTGCTTGCGACTGTTGCGAGAAAATTTGGAATTCTAAAAAGCAGCTTTGGCAGCATTTGATTCGTTCGCACGCGTACGAATCGCAACACACGTGCGGTATTTGTTTGCAAGTTTGTCGCGACTATTTCGATTTGTTTTACCATTTAGACTCGCAGCATTCCGACATGGTAAACGATACGGTCGCTAATCGATTCTCGTGCTTCATCTGCGGTCATTATCACAATTCGCAGAGTAAACTCGACAAGCATTTCTTACTGCATAAAAATGCGCCGTCACGTTGCGAATACACGTGCCAGTATTGTCGTAAAGTATACAAATCGGTGGCTTTCTATCGAGATCACATGCGCGTACACGAGGCCGAGCAGCCGGCCGAGGCGAAGACCAAACCGATTTCCGAATTCAGCGGATTCAGCATTAACCATATTCTAGCGACAAAAAACGATCGATCTCGCCACCTGACCAACGTTGTTGTGGCACCCGCCGCTGCTGTGACATCGGttccgccgccgccgccgccgccactACTTAAAATCGAAACCCGTCCGGAAGCAGAATGCGAATCCGACGCTTCCGCTCCGTTTGACCGAAACGTATACGGCTGTTTAACGAACGACGTAAATTTGACCGAAGCCGCcgccgacgacgacgacgacgacgacgacgacaacgacgacgacgacgtcgtcgATAGTGAAGCGAAAGCGACGAACGAAAATGAAGACTACGCAGTCCGCGACAATGTGTCGGGTGCGATTAAAGACGGATTGTCGCGGGAACGAGTATCGCTACCCGCGGCAACCGATGTCCGATTACCGTTTTCCACGCACTTTCGACAACCGAATAAGAAACGCGCAGAAACGCCTTCCGAAAGCTATTCGATCGTTTCGACCGCCGACGCCGATGACgccgatgacgacgatgacgaccacgacgacgacgacgacaaaatCGAAGGCAGTTGCTCGAAAAACGGCGATAATGTAAGCGGTGGCGCTGATGTTTTGCTGAACGGCGGCGGTAACATTGCCGATGACGATTTCACCGTCACTACCACCACCGCTACTGCCAGCAGCGTAGCCACAGCCACCGCTACAACCGCTTTCAGAGTGATgaataataatcaaaaacaGCGCTCGTCCAAATTTCAGAATGACAGAACTAGCTTTTACAACTCGGCTGGAGACGGCTATTTGAAAAGCGTCACCGACGACCTTTAA
- Protein Sequence
- MQEICESEIKANFHELCRLCASIDNVKIGIFSEEGIKRQLRKKISTCLPFKVEENDGLPKSLCFKCVYNLETTYEFRLKCIQVNRSLEKHLYQLERDKQSKNVISARSYKIHPEVSIFAISTESSEEKQNEVKTDVPPSMECEEESPNPLDFLEVGVNSEESSNIRPKSNLQDGKKSHFWKTDRRWLSVEHKPLHNKATTPNHSTRVNMKYFDTSTPDDNGSRRKSCNPRRIARESEECVDYIGSSVIGTSFPSSAVTDAVAVTTQFVDRMIVDNITDDVNSSQKAKGNEKSEGQAVDEDELPSSLSSRQHERFTCLLCEKSFNLRSSLNKHFSSIHGIEPYEVLSSTSSSSSSSLSLSSSLPARASLLSTSFITQLAETTTTLSSDAASKNEDDLENMMEQETVIFCEVCRREFQDRASLWLHMVHAHREEASVSCGICLKICCDNITLIEHVNTAHSGDKAVVQRRYSCQVCGRQHDSRQKLLKHATLHTLIDNQGQTIQPEEMVSLNNAFAPRECPICRKRFFNEEKLNHHTQNFHNDTNDTTLSPSTVYKCELCASAHATRMDRWWHMYYSHLGDVRVTCPRKNCRKIFVSVTLKEEHAKAHHETQGDFTNTCEICGKLWESRTVFYKHMMNVHPKCLPTICGICMKIFSNVPELRQHVQADHPPLEESGGICCDVCGRPYAERSKMLRHRRVHNVTDGVPAATSTVKKKDDLVCSFCPEVSFDRYEDIAQHRRTVHQLFVCDLCPKFYNGNNHLWKHVSKQHKGDPNVTCNLCLRTSASRAHLERHKIKYHSDPVDKLLSKQQLSYAGASAIAGAAAITATLPHQPHKCSLCGKLFRIRSLLKKHLKSCKGVKALGASAAAAASLTAKVLPVNGVFPCSKCSKVFPLQSVLSKHVKNSHAQHACEVCQTEGEVSAYDTKKGLLQHIRERHADNYELVCDVVGCGKVLRLKADLKKHKLEHQRGYFTYICEICGDMFSNRKKLRKHLVTYHKADVKYLCAICASIYQSVDKLVQHVHGAHSFVLHRPYTCQICGKNWTVSSKVVDHISKVHGTEYKPCRICWKVFTDEETFQQHTDNHPPVEEKSSSVNNASTTNGTAPSAVATVNDHVASQSSPSHSEACSSFSAAGSGASETGGEDNRSRLRKRDECEAGVVGGSDGAGTKRPLPSNEADASLGDENENASKRLRRKYKCVWCKDTFRSMDELKEHKQTEHANNRHSGESQQQTPLPKAEPGAVAVAESNTETETISSSDASAVRALELAENQQQRFDTNKSERWTDIRPIACDCCEKIWNSKKQLWQHLIRSHAYESQHTCGICLQVCRDYFDLFYHLDSQHSDMVNDTVANRFSCFICGHYHNSQSKLDKHFLLHKNAPSRCEYTCQYCRKVYKSVAFYRDHMRVHEAEQPAEAKTKPISEFSGFSINHILATKNDRSRHLTNVVVAPAAAVTSVPPPPPPPLLKIETRPEAECESDASAPFDRNVYGCLTNDVNLTEAAADDDDDDDDDNDDDDVVDSEAKATNENEDYAVRDNVSGAIKDGLSRERVSLPAATDVRLPFSTHFRQPNKKRAETPSESYSIVSTADADDADDDDDDHDDDDDKIEGSCSKNGDNVSGGADVLLNGGGNIADDDFTVTTTTATASSVATATATTAFRVMNNNQKQRSSKFQNDRTSFYNSAGDGYLKSVTDDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -