Basic Information

Insect: Ferrisia virgata
Gene Symbol: -
Assembly: GCA_900060175.1
Location: FIZR01013670.1:20895-24676[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 1.3e+02 3.5 0.1 3 23 9 29 8 29 0.93

2 15 0.0095 0.86 10.3 1.0 1 23 735 758 735 758 0.94

3 15 0.035 3.1 8.6 0.5 2 23 814 836 813 836 0.95

4 15 0.033 3 8.6 1.4 2 23 844 866 843 866 0.95

5 15 0.0019 0.17 12.6 3.2 1 23 868 890 868 890 0.98

6 15 6.4e-05 0.0058 17.2 0.8 3 23 898 918 896 918 0.97

7 15 0.00033 0.03 14.9 1.7 2 23 925 947 924 947 0.95

8 15 0.04 3.6 8.4 0.9 5 23 960 978 959 978 0.96

9 15 0.00059 0.053 14.1 1.4 2 23 984 1006 983 1006 0.97

10 15 0.013 1.2 9.9 0.5 2 23 1024 1044 1023 1044 0.97

11 15 4.9e-05 0.0045 17.5 1.3 1 20 1050 1069 1050 1072 0.92

12 15 0.00014 0.013 16.1 2.0 1 23 1080 1102 1080 1102 0.99

13 15 3.9e-05 0.0035 17.9 3.3 1 23 1108 1130 1108 1130 0.98

14 15 2e-05 0.0018 18.8 6.3 1 23 1136 1158 1136 1158 0.98

15 15 0.011 0.99 10.1 7.7 1 23 1164 1186 1164 1186 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	1.3e+02	3.5	0.1	3	23	9	29	8	29	0.93
2	15	0.0095	0.86	10.3	1.0	1	23	735	758	735	758	0.94
3	15	0.035	3.1	8.6	0.5	2	23	814	836	813	836	0.95
4	15	0.033	3	8.6	1.4	2	23	844	866	843	866	0.95
5	15	0.0019	0.17	12.6	3.2	1	23	868	890	868	890	0.98
6	15	6.4e-05	0.0058	17.2	0.8	3	23	898	918	896	918	0.97
7	15	0.00033	0.03	14.9	1.7	2	23	925	947	924	947	0.95
8	15	0.04	3.6	8.4	0.9	5	23	960	978	959	978	0.96
9	15	0.00059	0.053	14.1	1.4	2	23	984	1006	983	1006	0.97
10	15	0.013	1.2	9.9	0.5	2	23	1024	1044	1023	1044	0.97
11	15	4.9e-05	0.0045	17.5	1.3	1	20	1050	1069	1050	1072	0.92
12	15	0.00014	0.013	16.1	2.0	1	23	1080	1102	1080	1102	0.99
13	15	3.9e-05	0.0035	17.9	3.3	1	23	1108	1130	1108	1130	0.98
14	15	2e-05	0.0018	18.8	6.3	1	23	1136	1158	1136	1158	0.98
15	15	0.011	0.99	10.1	7.7	1	23	1164	1186	1164	1186	0.98

Sequence Information

Coding Sequence: ATGGAACCTCAAACTAGTATGTTATGCCCTGTGTGCTCGTTGTACCTTCGCGAAGGTATCTCTTTGAAGAGTCACTTACAAACTCATTCGAAAGATAAAGTTATCGAAGCTCTGCTGAACAAGCAAATTGGCTTGGATGGTGCTGCATTATGTTCTTCGGAAACCGATACGTTAGCTTCGGTAATCCGAGactcgtcatcgtcatcaatTTCATTATCGTCGGAAAATCGAGTTACTTCTTATAGTCATAGTACGTTATCAATTTTACCCACACCGACTTATGTACAACCTGCCAACCCATCGCCATCGTTGTCCGGATTTAATTGTAATCAAAGTACCATTCCTGCTAGTATGCAGTACATGCCTGCACTCGGTAATAACGTTATAGCAGCAACCCAGACTATGCTTGGCAACACTTATCAGTCGAATTTAACGTATCAACAATTCATCACCAACGACGGTAACATTGTTTTAATTCCTGTGTACACATCACCGCCAGCGCCACCCATGATGGTTTCTAACAATTTATTATCTCCGCCTGTAATCAATTCCTGCATTATGGTTCCACCGGCGGCGGCAACCAGCAACGTTGGTTCGGTAACTGTTGTCGATACACCTGCTGCTCGTGTACCGCATCATCGCGAATCACCTAAGCTGATTTCGTCTCCGTCATGCTGCGTTACTTTGATGGAAAATTGTACCGACCATGTTCACCGGgtcgacgaagacgacgacgatatcGACGAGATCACTTTGCAAGAATGCCAAACAAATCAACCGCTCGTCTCGCAGCTAGTTGCCAAAGATCCAACGGACGATTATGAGAAAGAAAACGACGCCGAAGTTGctagtattttcaaaatacccgCTAGTTCGATCGTCGATCAACAAGAACAGAAACAACTTGCGACCACGAATGTAGACGAAAGCGTACAATCGACTTCTCAGGATGTGTTGGTAGATTTGGAGGACATAGACGATAAATCGAGCTGCTATTCGTACGATAAACTCGACGAAGATCGTCGAAACAATTACTCGGTCGTCGATTCGCCATTTTCGAGTAACAACTATGAAAACGAACGTGAAGATGACGACgagaacgacgacgacgacgacgacgacgacgataacgAAGCAAGACCTTCGAAATCGTCGTCGTCTATATCGCCGGATATTTCCATCATAAAATTGCATACCGAGCTGAACTACGAGAGCGAAAACTCGGAGAATTACACTCCGGAACCAACGGAAGATTCGGGCTGTTCGGCGGGTGATGTTTTGAAATCTGACGAAGGCGAGTCCGATAAATCCGAACACAGTTACGTTAAAGATTATTGCAAATCGCCGGTACCGATGATGGTCGACAGCAAAACGTACACTTCACCTATTCACAGTCCGGCTCCGATGGAAAATTCTCACCTCCAACGTAGCGGACAATTCGACTTCATCGTCTCTAATTCGGACAACGCGACGCATATTTTACCTGACCGACTGGATGACGAATTAGGCCCATCGACGTCGAAGAACTGCGAAAAAGAACATTATATTTTACCGAATAACGAAATACCTCGTACGTCTCCGGTCAACGTGGACTACAGTTTTATTGGTCTGCGAAGTAGCTTTTCGACGTCCGCTTCTTTGATCTCGTCTGTAAATAAGACCATGTTCGCGGACGTAGACGTTTACGCGGTTgagaaaaacgaagaaaattatttcgaaaaatgcgAAAACGATAACGCCACCAATTTCAGCAAAGACGATTTCTACGCGTCgcaacaacaacgacaacaaGCTCACTACGCTAAAATGAACGTCACCACGGAAGAGAAAATCAGAGAAAATTACAAAGGTTTCAACGAATTGTTGTTGGATTCCGCTGCTAGCTCTCGTATTAGTCCGTTCGATATTCAAACCGACGAAAGTATGCCGGCTCGAGGCGAGCTATCCGGTCAAGAAAGTCTCAGTGGTACCGAAAATTCTATGTGGGAATCGCAGGTACAGCAGCAAAATGCCTACGTCCAGCGGTGTAATATTTCGTGCAAGAAGGAAAGCAGCGATGTAAAAATAGGATTACAAACTTTGATGgctgaaataaatatcaaagtGGACGCGGAAACGTTCAGAACCGTCGAATGCGATTCGGTTGATGAAGATAGCAAATTGGTCGTTCAGAAATTATGCAAGAAAAAACTTTCTCGCGAATTTCGATGTTTCTACTGCAAGGAAAACTTCGAAAGTTGGAAATCACGGCAACTGCACATTGCCAACGTTCACGCCGACGAAGACGGTCTCACCATCGAATCGTTATTCGGTAAAAAAGTGAAACGCGAACGCGAAGATGCGGGAGAACCGTGCTCGTCGTATAGCGTGGCCAAAACCGAGACGGATGCCGTCAACGAAGACTATTCGACCGACTTGACGACCAGCACCGAAACCACACAATGCCGTATATGTagcgaaaatttcgaaacgaGTATATTGTTTTTGgatcatttgaaaaacatgCACGGTATCAAGAAGCGAAACTGCGTATGCCCTACTTGCTTAGTACATTTTACCAACGTCGAAGAGTACCAagaacatatccaaaaagtgCATCCGTACGAATGTATGACCTGCGGCAAAAAATTCCACACCAGACCGGGCTACATGCTGCATCAGAAACGTCACATGAAAGTTAAACCTTACGGTTGCCACGTATGCGACAAATCATTCGTAACGAAGCAAAAACTTGGCGAACATATCAACATACACACCGGAGATAATCCTATCAAATGCGATATGTGCGATTCCGTGTTCAAACGCTACTCCAATTACCAGCAGCATAAGAAATACCTGCACATGAATACGAAACGTAAGCTAAAGGACTTCATATGCGACTGCGGCGAAGTATTCCACAGCAAAACGAAGCTACTGTGGCATCGTGAAATACACGACGAAAAGCCGAAACAGTGTCCATTCTGCGTGGAACGTTTCGTGCATACGGCCAGTCTAACGCGCCATGTACGTAAATGGCACAACGAAACCTATCTGTCCGAACTGGTCGACAAGAAGAAGATCAAAAACGTCGTCTGTCCAGTGTGCAACATCACCTATTTGCATACGTCGCTGCAAACGCACATGAAAATACACGAAGGCATTAAACCGTTCTCGTGCGGCGAATGCTCGAAAACCTTTCGAACCAAATGGAATCTACAGCTACACCGATGGACCCATATGTCTCGCTCGTCTAAACCGTACAAATGTAAACTGTGCGTCAAAGCCTATATACATAAAACCGACTACGAAGCTCATCTCAGATCTCACAGCAACTGCAGACCGTACTCGTGCAACGTTTGCGGTCGTCAGTTTATCCGCAAGTACAACTGCATTCGCCATATGCGAGAGCACAAAGAACCTAAAGCGCACAAGTGTAATCTATGCAAGAAAATGTTCTCGCGCAGTTATTACCTTACCGAACATTATAAAACGCATACCTTGGAAAAGCCTCATACGTGTCACGTGTGCGGTAAAACTTCCGCCACCAAATCCAATCACAATAAACACGTTAAAAAGCATAACAATATCAGAGAGTCGGTCAATTCCGAAATTTAA
Protein Sequence: MEPQTSMLCPVCSLYLREGISLKSHLQTHSKDKVIEALLNKQIGLDGAALCSSETDTLASVIRDSSSSSISLSSENRVTSYSHSTLSILPTPTYVQPANPSPSLSGFNCNQSTIPASMQYMPALGNNVIAATQTMLGNTYQSNLTYQQFITNDGNIVLIPVYTSPPAPPMMVSNNLLSPPVINSCIMVPPAAATSNVGSVTVVDTPAARVPHHRESPKLISSPSCCVTLMENCTDHVHRVDEDDDDIDEITLQECQTNQPLVSQLVAKDPTDDYEKENDAEVASIFKIPASSIVDQQEQKQLATTNVDESVQSTSQDVLVDLEDIDDKSSCYSYDKLDEDRRNNYSVVDSPFSSNNYENEREDDDENDDDDDDDDDNEARPSKSSSSISPDISIIKLHTELNYESENSENYTPEPTEDSGCSAGDVLKSDEGESDKSEHSYVKDYCKSPVPMMVDSKTYTSPIHSPAPMENSHLQRSGQFDFIVSNSDNATHILPDRLDDELGPSTSKNCEKEHYILPNNEIPRTSPVNVDYSFIGLRSSFSTSASLISSVNKTMFADVDVYAVEKNEENYFEKCENDNATNFSKDDFYASQQQRQQAHYAKMNVTTEEKIRENYKGFNELLLDSAASSRISPFDIQTDESMPARGELSGQESLSGTENSMWESQVQQQNAYVQRCNISCKKESSDVKIGLQTLMAEINIKVDAETFRTVECDSVDEDSKLVVQKLCKKKLSREFRCFYCKENFESWKSRQLHIANVHADEDGLTIESLFGKKVKREREDAGEPCSSYSVAKTETDAVNEDYSTDLTTSTETTQCRICSENFETSILFLDHLKNMHGIKKRNCVCPTCLVHFTNVEEYQEHIQKVHPYECMTCGKKFHTRPGYMLHQKRHMKVKPYGCHVCDKSFVTKQKLGEHINIHTGDNPIKCDMCDSVFKRYSNYQQHKKYLHMNTKRKLKDFICDCGEVFHSKTKLLWHREIHDEKPKQCPFCVERFVHTASLTRHVRKWHNETYLSELVDKKKIKNVVCPVCNITYLHTSLQTHMKIHEGIKPFSCGECSKTFRTKWNLQLHRWTHMSRSSKPYKCKLCVKAYIHKTDYEAHLRSHSNCRPYSCNVCGRQFIRKYNCIRHMREHKEPKAHKCNLCKKMFSRSYYLTEHYKTHTLEKPHTCHVCGKTSATKSNHNKHVKKHNNIRESVNSEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -