Basic Information

Insect: Ferrisia virgata
Gene Symbol: -
Assembly: GCA_900060175.1
Location: FIZR01026758.1:28324-41190[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.027 2.4 8.9 1.3 2 23 99 125 98 125 0.89

2 20 0.0023 0.2 12.3 3.1 1 23 1167 1189 1167 1189 0.98

3 20 0.0022 0.2 12.3 4.3 1 23 1194 1216 1194 1216 0.98

4 20 0.0052 0.47 11.2 1.0 2 21 1227 1246 1226 1247 0.93

5 20 0.038 3.5 8.4 1.0 1 23 1252 1275 1252 1275 0.97

6 20 0.34 30 5.5 0.1 2 23 1324 1344 1323 1344 0.79

7 20 7.3e-07 6.6e-05 23.3 0.9 1 21 1350 1370 1350 1371 0.95

8 20 0.00038 0.034 14.7 0.6 1 23 1378 1400 1378 1400 0.98

9 20 0.00024 0.021 15.4 0.3 1 23 1410 1433 1410 1433 0.98

10 20 0.052 4.7 8.0 2.1 2 23 1442 1464 1441 1464 0.89

11 20 0.00022 0.02 15.5 1.0 1 23 1472 1495 1472 1495 0.98

12 20 0.019 1.7 9.4 0.1 2 23 1527 1549 1526 1549 0.94

13 20 0.0016 0.15 12.8 0.2 1 20 1577 1596 1577 1598 0.92

14 20 1.3e-06 0.00012 22.5 0.8 1 23 1607 1629 1607 1629 0.98

15 20 0.0019 0.17 12.5 0.6 1 20 1638 1657 1638 1659 0.95

16 20 0.6 54 4.7 0.5 3 23 1663 1684 1662 1684 0.93

17 20 0.0047 0.43 11.3 2.1 1 20 1729 1748 1729 1749 0.96

18 20 0.00034 0.031 14.9 4.4 1 23 1757 1780 1757 1780 0.97

19 20 0.0011 0.097 13.3 2.1 1 23 1785 1807 1785 1807 0.96

20 20 0.42 38 5.2 1.1 5 21 1816 1832 1813 1833 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.027	2.4	8.9	1.3	2	23	99	125	98	125	0.89
2	20	0.0023	0.2	12.3	3.1	1	23	1167	1189	1167	1189	0.98
3	20	0.0022	0.2	12.3	4.3	1	23	1194	1216	1194	1216	0.98
4	20	0.0052	0.47	11.2	1.0	2	21	1227	1246	1226	1247	0.93
5	20	0.038	3.5	8.4	1.0	1	23	1252	1275	1252	1275	0.97
6	20	0.34	30	5.5	0.1	2	23	1324	1344	1323	1344	0.79
7	20	7.3e-07	6.6e-05	23.3	0.9	1	21	1350	1370	1350	1371	0.95
8	20	0.00038	0.034	14.7	0.6	1	23	1378	1400	1378	1400	0.98
9	20	0.00024	0.021	15.4	0.3	1	23	1410	1433	1410	1433	0.98
10	20	0.052	4.7	8.0	2.1	2	23	1442	1464	1441	1464	0.89
11	20	0.00022	0.02	15.5	1.0	1	23	1472	1495	1472	1495	0.98
12	20	0.019	1.7	9.4	0.1	2	23	1527	1549	1526	1549	0.94
13	20	0.0016	0.15	12.8	0.2	1	20	1577	1596	1577	1598	0.92
14	20	1.3e-06	0.00012	22.5	0.8	1	23	1607	1629	1607	1629	0.98
15	20	0.0019	0.17	12.5	0.6	1	20	1638	1657	1638	1659	0.95
16	20	0.6	54	4.7	0.5	3	23	1663	1684	1662	1684	0.93
17	20	0.0047	0.43	11.3	2.1	1	20	1729	1748	1729	1749	0.96
18	20	0.00034	0.031	14.9	4.4	1	23	1757	1780	1757	1780	0.97
19	20	0.0011	0.097	13.3	2.1	1	23	1785	1807	1785	1807	0.96
20	20	0.42	38	5.2	1.1	5	21	1816	1832	1813	1833	0.92

Sequence Information

Coding Sequence: ATGATTTTCGTTAACAGTGGGAAAACTCCATTAAAGAGCAGTAACTACTTGAGCGCTGTTGGAAGGATTACATCAGATTTTGCAGTTCCTCGCACCCCTATAGGAAAATTACGTGAATCAAAGTTCAGTTCATCAGTGAATGGTGTTGGAAAACATATTTCGGAATACGAAAAACAAtgtttaatttgtaaaaataagaagGACCAAGATAATCACGTATCAATATTTCTTACTTATCGTGACCTTGATCAACACATTATGGAAAATCATTCTAAACCATATCCAACTTATAAACGATGCCCTTACAAAGAGGAGAAATGCGAAAGGCATTTTACTTCCATGGATCAACTCCGAACTCATGTGTTATTAttgcatcaaaaacaaaatcggACTTTCCCTTCGGAAAAACAAAATCTTCAACGAAAATCACTATTGAATCAGATGGATGCATTTCGTACAAACTGGATTacattgaatgaaaaattacgcgaTGCTAATAGTAAAATTGAATCACTCGAAGCTGAGTTATCAATTACTAAAAGTCAACTTCAACATACtacctacgaaaaaaacattttaaatcatGCCTTAAATGAACTACGCGATGCATTACGAACtgattgtaaaataattgatcAAGATCAAAATAACATATCCGCGTTTATCAGAATCGCTGAACAAAATGCCACCACTGCTACTGATTCAGAGTGCAATGAACAAAATACTACTCAAACAAATTCAATAGTAAATTTGACTGCAGtgactgaaatttcaaatttggcgGATCGTGTTGACCAAACTTTTCGTTCTTCTTTCGATAACGGCTCAGTACGCCCTAAACGAAATATGACATCCGATGAAagttttattagaaattttgtaaaattgcatTCGTCTTCTACAATGACTACGACTCGTACAACAAAGGTTCTACCAAAAACTACGAAAATCTATTGTAATAAAACCtcttcgaataaaaatggaaacctTGTCATGAGTAGTAAGAAAAGGTTGGAAAAACTTAATATCAGTTCAAAATCAAAGTTAATCGATCGtggtcaaaaaaatggaattagcgttatgaaagaaaaagttgGCAAAGTTATTGTAATCGATtttgatgaagaaattgagaaagaaaaaaaccatccaAATTCAAGTTcgacaaaaaattctaattctaTCAATTTGGAAGTGatttatgatgaaaatgaaggCAATAATGatttgaattcaaataattCAGCTGTTTCTGATTCACTGAATGGTTGCTATATAAATGAAGATGGTCACTTGAAATCTGATAgattgtcaatttttcttaattctgATAAGATAGTTTGCTCTTCGGATACAGGTAATCTCTCCAATTCAAATAGATCGCCTAGCAATTCCAACTCGGATATTCATCCGAATTATGAAATTGCCTCGATTCAAAGTCAAACACAATCGAACGACGAGGTTGAAAGCTTTGATTCAACTGTCGTCctaataaaatatgaagatcCAGCTGCTTCAAATTCAATAGTACTCGGCTCGAGCTTTGGCTCGGTAATTCATGATcaagatgaagaaaattataaaactttcaaTGAGAAAGATTCACTCGGGTTAAATTCAAATGAAGAAGTTGCGATTAGTCCGTACACAGCACATGAtgaagtaaattttccaaattcatgTGAGCAATATTCATTGGATTCAAGTTCGGGCCAACCACATTCAAGTCCTGGTTCGATTATccaaaataacgataaaaataagagTTCTTCGGAAAATGAGCAGAATTTAtcgatttcaaaatcaactgaagaacttttcagccctaatACAATGTCAAATTATGCGCATGCTGAAGAGAACTCATCAACTTCAAATACTCAAACTGAATTAATTCCTGCTGATTCAACACTGGCTGCTGGTGGACCTATTATTCTTCTTTCACCACTTTATTTCAAAGATGATAGTACTGTAGATGCTAATAACAGCCAATTTTCCATGCAACATGTTATAAATAgtccgaaaaaaaatgtgaagatAATATCgaaaaaaaataaatttcaagaaacaGCATACCCTAGCGAAGATGTTAACCAAagtaacatgaaaaaaataaagctgcaggattctttttcatcattggAATCTGAATCACATTCTGTAAATATGCCAAACGTAACAGCTTCGAATTCTTCTAAAAGTATCacttcaaagaaaaatattggtcaaaaaacgaaaaaGAAATGTCTGATTTGTAGAAAAGAAAACCGCAAAGCTGTAAATTATAGAGTTAAATCAGCTCTCGACATACATATTTTGGATAATCACCCAAATCCATATCCAGAGTATCTGCGTTGCCCGTATGGAAAAGGCGAATcGGACTACGATTTAGTCGCGTTCAATATGATTTCGGTTGACTCGATATTATCAGAGGAACATGAAGTGGTCAAATTGAATGATCTGTGTCGATTGTGTGGTCATTTCAAAGAAAGTTCTGCgcttatttttgatgatttcaacCACCATAACTTCGACGatgttataaatatttatttcaaagatGAATTTCAAGTTTGTCGCGATGACGTCCTGCCTCAGAAAATATGTCAAAGTTGTTTAGCTTCCGTTGAATCATGGAATCAGTTCTACATTAATTGCGTCTGTGTCAACGAGAAGTTCAGTCAAATAATTGAgaagttcaatttaaaaaaggaatttGAAAAAAAGCCAGACATGATTAATAACGATATTGAAGTAATAGAAGTTGGCGTAGAAGgcgaaaattacgattttttcaacgattcagCTAACACCAATCagtttgatatttcaaatatgaaGTTTGTGCATTCGTTATCAGATTccactaattttcaaaatttcgataatgtAGAAGATATGAACTATTCTAATGATGTGATTGAGAAAAATGCAACCGAAAAATTATCTACAGATCGAACTGAGTATAACAACGGAAACGAAAATACCACTAGCGTGGTCATCGACGTCGACAATGCTTACAACGGCCATAGAGTcgaagacgacgacgtcgaTGACGTTGACGACACCAGTATCATCGATTCAAATTGTATGGAAACTGATAATGCGATGCCTACCGAGCCGGCCACCACCGAAATATTTGATGAATTACAAACCACCACCGACGACAACTCTGCCTCTGTCTCGCAATACGATCATAATCACGATAGTACAGATTTAGATCCCACTTTGATCCCATTGAAATGCATCATTTGTTCGAATACTTGTTTTAGTGGTCGATTAGTCAACGATCAGTACGTTTGCGATTCATGTTTCAAAGTGAAGCTCGAAGCAAACGAAGACGATCAATGGAATTACGATATGGAGGCCGCAAATGCTAGCGACGATAACGTCAATAATGCTGCTTCGTCTGGTCATTCGGCAGATGAAATGATGGCGGCCGTGATGAATGATGATACCTTCGATTTAACGGCTATGAAAACCTTACCCaacgaaaaatatcaatgcgcaatttgtaataaaatatattgCAAAAAGAAGAGCATGATAAATCACGTGAAAAATCATAGTAAGAAAATATTCACGTGTAAGGTGTGTAATAGTAATTTTCGTACGCAGCTGCAGTTGAAAACACATAAAAAACGTCACGTACGTAAATCTCTAAATAATACGTTAATATATTGCGAAATTTgcaagaaatatttcaaaacgaaaaaagggTTTGCGTATCatcagcaaaaaatttgtattcaatATAAATGTTACGTTTGCGACGAGAAATTCTTGGTACATTCGGTATTGATGGATCATATGCGAAATGTACACGATGAcggaaaaaaaacgttaccGGTGCTGGCCGCTTCTAGCGTTACAGCAACATTGTCGGTGGATGGTGTGGCCACAACCTCGACGACCACTACCACCACCCCAACAAAGACACCAGCTAACGATAATGAAACCATAATGAGTGTTTGCCCAATTTGTCACAAGGTGGTTACACAAGCCGTGCTTCCTCGTCATATGATTTTGCATTCGGAAGATAAACCATTCACTTGTGACATGTGTGGCAAGTCATTCAAAAGAAAACATTCGCTACAGGATCATATTATGATCGAGATGGGAATGAAGAATTACGTTTGCGATATTTGTGGCATGAAGTTTCTCAAACAAGGTTACCTCAACAAACACGTCAGATATCATCAGCTGAATAACGGCGAATACCAAGGATTCCGATGCGAGATGTGCGGTAAGAAGTTTCCGGAAAAGTGGCGCCTGGGAGTGCATCAAAGATCGGTTCACAAAGGTGGCCGATTCTCGTCGTGTAAATGCGACATTTGCGGCCATATGTTCGCCGAAAGATGGATGGTTCGTAGGCATAAAGCGGAGAAGCACAATGGCGAAGAATTTAAAGAATACCAATGCGACGTTTGCGGTAAAAAGTTTCAAGAAAAGTGGATGATCAGGTCGCATCAAAGAAGCACCCACAAAAGCGgcgttaaaaaaatgtactgcGAATTGTGTGGTCGCGGAGATCATCTGGAGAAAGATTGTACGCATaggcaaaatttaaaagaagtTACTTGCGAACTGTGCGGCGAACAGTTTGcttcaaattttgttcttaAAGAGCACGTCACGTCGGCGCATAATTTCGATCACATGGGTCAAGTAGTTAAAGCTGAGGAATCGATACCGGTCGAAATacaagaattagaaaaaagcaTTTTACATATTTGCGCAGGATGCGGTAAACAATTTGTCAGCAAACAGAAGCTAAGGCAGCACGAACTCGAAGATCAGTGTATTTACGAAATGAAATACGAATGCGAAGAATGCGGTAAAGTATTCCATTCCAAATCTAGCCTCAGTAATCACGTTATGATTCATCGGAAAGCTGGTCTACCAACCATGcataaatgtgatttttgtcgTCGCGAGTTCCGAACCAGCGATGCTCTTGATAGTCACATGTCCGGCGATAAATTATGTCTCATTTGCGGTAAAGTATATCCGTGCGACGATCAGCTTCGTAGTCACGTCTATAAGGAGCacaacgacgatgacgacgatgagaATCGTCTGCCTAATAAAAGATCTCGAACATCAGCTCAGCAGCAAAACGACGAATCGTCGCAAGATGAGGTTGATACGAAGACTTTTAGCGACGTTCAACCTGATAAACCGTTCGAATGTCGattatgtcataaaaaattcgctCGCAAACAggcgatgaaaaatcatctgtaCGCTGAGCTGAATTTACGCAGACACGAGTGCGAATTCTGCGATAAACggtataattattattcgcATCTGAAAGAGCACATTATCACCAATCATGGCGAAAAAGAGTACGCTTGCGTTCATTGCGGTAAAGATTTCCCAACGAGAAAACGTTTCAGAGATCACATGACTTTGCATTTAGAAGATAAACCTTTCCAATGTATATGCGGTTtatcatttaaattaaatagatATCTTAgtaaacataagaaaaaatgtaaagctATGGTAAAAAAAGAACTCGAATAG
Protein Sequence: MIFVNSGKTPLKSSNYLSAVGRITSDFAVPRTPIGKLRESKFSSSVNGVGKHISEYEKQCLICKNKKDQDNHVSIFLTYRDLDQHIMENHSKPYPTYKRCPYKEEKCERHFTSMDQLRTHVLLLHQKQNRTFPSEKQNLQRKSLLNQMDAFRTNWITLNEKLRDANSKIESLEAELSITKSQLQHTTYEKNILNHALNELRDALRTDCKIIDQDQNNISAFIRIAEQNATTATDSECNEQNTTQTNSIVNLTAVTEISNLADRVDQTFRSSFDNGSVRPKRNMTSDESFIRNFVKLHSSSTMTTTRTTKVLPKTTKIYCNKTSSNKNGNLVMSSKKRLEKLNISSKSKLIDRGQKNGISVMKEKVGKVIVIDFDEEIEKEKNHPNSSSTKNSNSINLEVIYDENEGNNDLNSNNSAVSDSLNGCYINEDGHLKSDRLSIFLNSDKIVCSSDTGNLSNSNRSPSNSNSDIHPNYEIASIQSQTQSNDEVESFDSTVVLIKYEDPAASNSIVLGSSFGSVIHDQDEENYKTFNEKDSLGLNSNEEVAISPYTAHDEVNFPNSCEQYSLDSSSGQPHSSPGSIIQNNDKNKSSSENEQNLSISKSTEELFSPNTMSNYAHAEENSSTSNTQTELIPADSTLAAGGPIILLSPLYFKDDSTVDANNSQFSMQHVINSPKKNVKIISKKNKFQETAYPSEDVNQSNMKKIKLQDSFSSLESESHSVNMPNVTASNSSKSITSKKNIGQKTKKKCLICRKENRKAVNYRVKSALDIHILDNHPNPYPEYLRCPYGKGESDYDLVAFNMISVDSILSEEHEVVKLNDLCRLCGHFKESSALIFDDFNHHNFDDVINIYFKDEFQVCRDDVLPQKICQSCLASVESWNQFYINCVCVNEKFSQIIEKFNLKKEFEKKPDMINNDIEVIEVGVEGENYDFFNDSANTNQFDISNMKFVHSLSDSTNFQNFDNVEDMNYSNDVIEKNATEKLSTDRTEYNNGNENTTSVVIDVDNAYNGHRVEDDDVDDVDDTSIIDSNCMETDNAMPTEPATTEIFDELQTTTDDNSASVSQYDHNHDSTDLDPTLIPLKCIICSNTCFSGRLVNDQYVCDSCFKVKLEANEDDQWNYDMEAANASDDNVNNAASSGHSADEMMAAVMNDDTFDLTAMKTLPNEKYQCAICNKIYCKKKSMINHVKNHSKKIFTCKVCNSNFRTQLQLKTHKKRHVRKSLNNTLIYCEICKKYFKTKKGFAYHQQKICIQYKCYVCDEKFLVHSVLMDHMRNVHDDGKKTLPVLAASSVTATLSVDGVATTSTTTTTTPTKTPANDNETIMSVCPICHKVVTQAVLPRHMILHSEDKPFTCDMCGKSFKRKHSLQDHIMIEMGMKNYVCDICGMKFLKQGYLNKHVRYHQLNNGEYQGFRCEMCGKKFPEKWRLGVHQRSVHKGGRFSSCKCDICGHMFAERWMVRRHKAEKHNGEEFKEYQCDVCGKKFQEKWMIRSHQRSTHKSGVKKMYCELCGRGDHLEKDCTHRQNLKEVTCELCGEQFASNFVLKEHVTSAHNFDHMGQVVKAEESIPVEIQELEKSILHICAGCGKQFVSKQKLRQHELEDQCIYEMKYECEECGKVFHSKSSLSNHVMIHRKAGLPTMHKCDFCRREFRTSDALDSHMSGDKLCLICGKVYPCDDQLRSHVYKEHNDDDDDENRLPNKRSRTSAQQQNDESSQDEVDTKTFSDVQPDKPFECRLCHKKFARKQAMKNHLYAELNLRRHECEFCDKRYNYYSHLKEHIITNHGEKEYACVHCGKDFPTRKRFRDHMTLHLEDKPFQCICGLSFKLNRYLSKHKKKCKAMVKKELE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -