Fvir007880.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- ZBTB41
- Assembly
- GCA_900060175.1
- Location
- FIZR01026758.1:51811-56529[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 2.6 2.3e+02 2.7 2.1 1 23 253 276 253 276 0.94 2 23 0.78 70 4.3 0.8 1 23 286 309 286 309 0.92 3 23 0.0018 0.16 12.6 2.0 1 23 342 365 342 365 0.90 4 23 0.18 16 6.3 0.5 2 23 374 396 374 396 0.97 5 23 0.49 44 5.0 7.3 1 23 431 453 431 453 0.98 6 23 3e-07 2.7e-05 24.5 0.6 3 23 460 481 459 481 0.96 7 23 0.00011 0.0098 16.5 2.5 1 23 487 509 487 509 0.98 8 23 7.3e-06 0.00066 20.1 0.6 1 23 515 537 515 537 0.98 9 23 9.6e-06 0.00087 19.8 2.9 1 23 543 565 543 565 0.99 10 23 5.9e-06 0.00053 20.4 0.9 2 23 572 593 571 593 0.96 11 23 0.00022 0.02 15.5 0.3 1 20 599 618 599 620 0.95 12 23 5.9 5.3e+02 1.6 0.8 2 11 668 677 667 680 0.83 13 23 0.0022 0.2 12.3 0.7 1 23 820 843 820 843 0.96 14 23 0.0076 0.69 10.6 2.5 1 23 848 870 848 870 0.98 15 23 1.2e-05 0.0011 19.5 0.1 1 22 876 897 876 897 0.95 16 23 0.033 3 8.6 0.2 1 20 903 922 903 924 0.94 17 23 0.0004 0.037 14.7 0.7 1 20 958 977 958 979 0.95 18 23 0.0011 0.099 13.3 0.9 1 20 986 1005 986 1007 0.96 19 23 0.0011 0.096 13.3 2.1 3 23 1030 1050 1028 1050 0.97 20 23 5e-05 0.0046 17.5 1.0 1 22 1056 1077 1056 1077 0.96 21 23 2.4e-05 0.0022 18.5 4.4 1 23 1084 1106 1084 1107 0.95 22 23 0.00016 0.015 15.9 0.5 1 23 1112 1134 1112 1134 0.99 23 23 0.019 1.8 9.4 0.4 3 21 1142 1160 1141 1161 0.93
Sequence Information
- Coding Sequence
- ATGCAGCAAATTTCTCTGATTTGTGTAGGTTATGCGGGAATAAGAAGTTTCCTGCGGTTTCAGTATTTGACAAAACAAGTCGTACAAGCTACCGAGACATTATTAACTTTCATTTCAGAAATATTCAGGTATATCTCAAATTCAGATGCTTTACCGTTGAAGTTGTGCAACGATTGTGCGAAATTTGTCGTATCATGGCATCATTTTCATTACGAATGTGTACGGATTAACGAAGTTTTATCACGTATCGTGGATAAATGTCAAATTGAATCAGTTCAATCAGAGCCGAATTATATtgatggtaaaaatgaaattgaagttATTGAAGTGGGTGTAGAAAGCTGTTctcaaaatactgaaaaatctaTAGACTCTAACAACACTGTCAAATCCAGCAATAAGCTATCCGAAAATAATGTTGAgatgatgatgatgatcgtCGACGAGAGTTATCAGGCCGAAAATGCTGCAGAAATTAACATTGTAAACAATAACGATGTCATATCAAAAGTTTTGATGTCATCGACAACACATGTCGCAGACTCCAGTACGGTTTCAAATCTACAAAACCTGTCACCAAACCAGCATACTTTACGAGCCGATGAATTTCTCGTCGACGTTGCAGAGTTGAGTGGTTGCTCAAAGAGCGAATCCGAGGTAACGGTAGAAGCGCGCGATGAAATAGTCGTATTGCTTCCAGAACCTCAGAACGAGTCTTTATTAAAAGGGTTCATGTTGAATGATTCAACGTCGCAGTTTCACTGCTCCAGTTGCTTTAAAGCGCACGTTACGAAAGAAGAACTCCTCGATCATATATACATCGAACATAAAACTAATATTGATCGAACTGAGATGTACGAATGTGATATGTGCTCTTTATTATTTGTTAAAAACTTTGATCGTAATTCTCATCGAAGTAATGTGCATAATATACGCACTCCTTTGCACGAAGGTTTCAGAGTTGTTAAAAGCTACAATCAAGCGATACCAGCTGCAGTTAAATTTGTTGACGATGAGAATTTATTTCGTTGCGAATattgtaaaatcaattttaatcgTCGCGGTAAACTGAAAATCCACAATGTGCGTAAACACGGCGTCATCTACCAGAACACAAGACGGTGTAGTATTTGTTCGATGGTTCTATTGAACAAACGAGCTCTAAGATTGCACTTGAAAACCGTCCATGCCAGAGTGCCAGATGAAGGTACCAATACCATTACTACCCTTAGCGAAGAATACctacaatttttatctaaacgCATAGTTTACCATGACGGAACGCGTTACTTCCAATGTGAAGAATGCCCCTATAGATGTCACGGACTGCATCAATTTATGCGTCACGAAAAACGTCATAGAAATGCCAATCCCTCTTGCGCTTATTGCGGTAAATCATTCACTACAAAAGGTTTACTTCGACGACATATTACCACCGTTCATcttcgtattaaaaatttccagtgTGATATTTGTAAGAAAATGTTCGGCGAAAAAAGACACATGCAGGAACATATGAATCTGCATTCGACCGAGTGTAGTTATGTTTGCGAAGTTTGCGGGAAACAGTTCAAGCAGAGACAATCACTGAGTGTTCATAAACAAATTCACGAAGGtgaaaaatcgttccaatGCGAATATTGTAATAAAgcgttcaatttcaaaaatcagttatcGATTCATACGAGAAAGCATAccggaaaaaatttaagtgtTTGTCAATTATGCGGCAAGAAGTTCACAAACAGTACAAGTTTAAAACTGCATATGGTTTCTCATTTAGATGTAAAGGCATTTACATGCGCTGTAtgcggtaaaaaattgaaaactaatcGATCACTTAAACAGCACATATCACTatacgTTCCAGGGCATTATGTATTTGTCGATACGAACTCAGTTACAATCAATAAATATTCTAAAGCTGATTCTGACAAGTCATCAACGCTCAAGGAAGGATTTAGCGGTGATATCGGAGGTAGTAATGGTTCTGGTGCAACGAAATGCAATAAATGCGGTTCAGTTTTCATGAAAAGTAAAGTAGAAAGCGCTAATAATCGCGGCACTTGCTATTCGTGTTATTCGAAAATGACTAAAAGTACAGTAACGACTCGTATATCaccaatattcaaaaattatctcgtaACTGAcgaaaatcgtcaaaattactttttttgcgACCTTTGTAACTTCTCTTGCGACGCTTTTCCCGATGTGTTCGCTCATCACTATAAGACAGAACACCCCCGAGCGAATTTATACTTGAGTTTCGTTAACGAGACGGACGATCCGTTGAGGAAATTTATTCGCGAGAAAAATGGAATTCGATCGTATCGATGCGATTGTTGCCAATTATCTTGTATTTCGCGTAATGTCTTCGTCGATCATTACGCTAAACACGACAATCGGACATTGAAGATATCAGGTTCATTAATGATCGAATTTAAAGGTGATAAATTTTACTGCTCtgtatgccaaaaaaaatttgccggTTTGGAAACTGCGAGAAAACATTTGAGACAGGTtcatggcgaaaaaaaatacaaatgcgGTGTGTGTCAAAAAGGGTTCACATACGAGCACAAAGCACGTATTCACGAAAAACGCCATCTTAAAATTAAACCTTTCATGTGTGATATTTGCGGTGGTACGTTTGTCGATAAAACGAACCTGGAGAatcacatgaaaaaaaatctatgctCGAAATACACGTGCGTCTGGTGTGACCAGAATTTCAGaagtaaaatcattttacaaaaacactTGTCCCAATGTGGCCAACGAAATGCCGACTCTACCGAAGATAAGACCAAACTTTACGGTAAACCAGCTGAACAGAGTAGCTCGTCAACTGACGAAGCTAAATGGCAGTACGAATGCGccaaatgtaagaaaaatttcaaatccaaatTAACCCTCAGAAGCCACATCATCAACGAATTCAATCTAACACCTTATAAATGTTTTATATGCAATCAGCGATTTCAAACCACGGTATCGCTCAAGAAACATCTTGATTTATGTAATAAATCGATAGCCGACTGCTCGGATCCCTCTCTTATCGTCAACTCCGATAATCTATTCGGTTGCAAACTATGCGGGcgtaaatttcgtaaaatggGCTACTTAAGGCAGCATTTCCGGTTACATTCCAATACGAAACCGTACGTATGCCAGTTTTGTGGAAAATCGTACACATTGAGGTCATCGTTCAGGTCACATATGTTGACTGAGATGAATCTACGAGGATACGCTTGCTCAGCTTGTGGAAAAAGATATAATTCCAGCTCTCATTTGACCACTCATATCAAAAAGCATCACCGCTTGAGAGAATTCAAGTGTGATGCGTGCGATAAAGAGTTTGCCTATGAAAGAGATCTCAAAGAACATGAGAAAACTCACAGTGATGCCAAGTCGTCTTTCTGTGAAAAATGTGGTGGATTATTCAAAACCAAGAGATACCTCAAGGTGCATTTGGAACGGTGCAATGTTTCGGAAAAACATTAA
- Protein Sequence
- MQQISLICVGYAGIRSFLRFQYLTKQVVQATETLLTFISEIFRYISNSDALPLKLCNDCAKFVVSWHHFHYECVRINEVLSRIVDKCQIESVQSEPNYIDGKNEIEVIEVGVESCSQNTEKSIDSNNTVKSSNKLSENNVEMMMMIVDESYQAENAAEINIVNNNDVISKVLMSSTTHVADSSTVSNLQNLSPNQHTLRADEFLVDVAELSGCSKSESEVTVEARDEIVVLLPEPQNESLLKGFMLNDSTSQFHCSSCFKAHVTKEELLDHIYIEHKTNIDRTEMYECDMCSLLFVKNFDRNSHRSNVHNIRTPLHEGFRVVKSYNQAIPAAVKFVDDENLFRCEYCKINFNRRGKLKIHNVRKHGVIYQNTRRCSICSMVLLNKRALRLHLKTVHARVPDEGTNTITTLSEEYLQFLSKRIVYHDGTRYFQCEECPYRCHGLHQFMRHEKRHRNANPSCAYCGKSFTTKGLLRRHITTVHLRIKNFQCDICKKMFGEKRHMQEHMNLHSTECSYVCEVCGKQFKQRQSLSVHKQIHEGEKSFQCEYCNKAFNFKNQLSIHTRKHTGKNLSVCQLCGKKFTNSTSLKLHMVSHLDVKAFTCAVCGKKLKTNRSLKQHISLYVPGHYVFVDTNSVTINKYSKADSDKSSTLKEGFSGDIGGSNGSGATKCNKCGSVFMKSKVESANNRGTCYSCYSKMTKSTVTTRISPIFKNYLVTDENRQNYFFCDLCNFSCDAFPDVFAHHYKTEHPRANLYLSFVNETDDPLRKFIREKNGIRSYRCDCCQLSCISRNVFVDHYAKHDNRTLKISGSLMIEFKGDKFYCSVCQKKFAGLETARKHLRQVHGEKKYKCGVCQKGFTYEHKARIHEKRHLKIKPFMCDICGGTFVDKTNLENHMKKNLCSKYTCVWCDQNFRSKIILQKHLSQCGQRNADSTEDKTKLYGKPAEQSSSSTDEAKWQYECAKCKKNFKSKLTLRSHIINEFNLTPYKCFICNQRFQTTVSLKKHLDLCNKSIADCSDPSLIVNSDNLFGCKLCGRKFRKMGYLRQHFRLHSNTKPYVCQFCGKSYTLRSSFRSHMLTEMNLRGYACSACGKRYNSSSHLTTHIKKHHRLREFKCDACDKEFAYERDLKEHEKTHSDAKSSFCEKCGGLFKTKRYLKVHLERCNVSEKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -