Basic Information

Insect: Ferrisia virgata
Gene Symbol: Sall1
Assembly: GCA_900060175.1
Location: FIZR01024816.1:18527-20446[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0016 0.15 12.8 0.1 1 19 116 134 116 136 0.96

2 17 0.086 7.8 7.3 5.1 2 23 141 162 140 162 0.94

3 17 4.8e-05 0.0043 17.6 0.2 1 23 167 189 167 189 0.98

4 17 0.0011 0.1 13.3 3.7 1 23 208 230 208 230 0.98

5 17 9.9e-09 9e-07 29.2 1.3 1 23 241 263 241 263 0.99

6 17 1.4e-06 0.00013 22.4 3.7 1 23 269 291 269 291 0.96

7 17 0.00022 0.02 15.5 0.9 1 23 297 319 297 319 0.99

8 17 0.00031 0.028 15.0 0.7 1 23 325 347 325 347 0.98

9 17 5.7e-05 0.0052 17.3 2.2 1 23 353 375 353 375 0.99

10 17 1.1e-05 0.001 19.6 2.8 1 23 381 403 381 403 0.97

11 17 5.3e-06 0.00048 20.6 1.7 1 23 435 457 435 457 0.93

12 17 0.00019 0.017 15.7 5.2 1 23 463 485 463 485 0.99

13 17 0.00081 0.073 13.7 4.5 1 23 491 513 491 513 0.98

14 17 3.4e-07 3e-05 24.3 3.5 1 23 519 541 519 541 0.97

15 17 0.00026 0.024 15.2 4.5 1 23 548 570 548 570 0.97

16 17 0.00025 0.023 15.3 3.8 1 23 576 598 576 598 0.95

17 17 8.3e-07 7.5e-05 23.1 1.4 2 23 605 626 604 626 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0016	0.15	12.8	0.1	1	19	116	134	116	136	0.96
2	17	0.086	7.8	7.3	5.1	2	23	141	162	140	162	0.94
3	17	4.8e-05	0.0043	17.6	0.2	1	23	167	189	167	189	0.98
4	17	0.0011	0.1	13.3	3.7	1	23	208	230	208	230	0.98
5	17	9.9e-09	9e-07	29.2	1.3	1	23	241	263	241	263	0.99
6	17	1.4e-06	0.00013	22.4	3.7	1	23	269	291	269	291	0.96
7	17	0.00022	0.02	15.5	0.9	1	23	297	319	297	319	0.99
8	17	0.00031	0.028	15.0	0.7	1	23	325	347	325	347	0.98
9	17	5.7e-05	0.0052	17.3	2.2	1	23	353	375	353	375	0.99
10	17	1.1e-05	0.001	19.6	2.8	1	23	381	403	381	403	0.97
11	17	5.3e-06	0.00048	20.6	1.7	1	23	435	457	435	457	0.93
12	17	0.00019	0.017	15.7	5.2	1	23	463	485	463	485	0.99
13	17	0.00081	0.073	13.7	4.5	1	23	491	513	491	513	0.98
14	17	3.4e-07	3e-05	24.3	3.5	1	23	519	541	519	541	0.97
15	17	0.00026	0.024	15.2	4.5	1	23	548	570	548	570	0.97
16	17	0.00025	0.023	15.3	3.8	1	23	576	598	576	598	0.95
17	17	8.3e-07	7.5e-05	23.1	1.4	2	23	605	626	604	626	0.96

Sequence Information

Coding Sequence: ATGGAATTCATTGACGAAATTGTCGATTCACATCCTGCCACCGATGAAGATACGGTAGTGTCACAAAACGAAATTCTTCAAAGTTTATTTCATCTCACCGACATAGCAAAAAATATGTTACACGTGGATGATGTCGTGTACAATATAATCGAAgagcaaaaacaaaatgagaaatcgCAGTCTTCGTTCATAGAAGATAACGAATATGTTGACGAAACCGATGGAACTGACTTAGCAGTTGTAGTGAATAATGCAGAAAACGACGATCATCTCGATCTATGCGTCGAAGAGATAGAAGAAATAGACGACGACGCTATCCCGGTAGGTATTAAAGTAGAAAGTGTCTATCGCTGTGATATTTGCGATCAGAAATACGATGACGAAGCGGATCTTTTAAAGCATTTTGAAGAAGATTATTTGAAATGCGATATTTGTGACAAACAGTTTTGCAACAAACTGCTGCATAAGTTGCATTTATCGACGCATAATAACGAATTATACGAGTGCGAAAAATGTTCGGCTGTATTTAGCGTACGAGATAATTTGGAATTACATCGAAAAGCTCATGATAATGGCGAAATTGACGACTTTATTAAGGAAACGTCACAGTCGCAGTCTTCGTACGTGTGTAAATTATGTCATTTTACTTTATTCTCGTGGTCCGAATTGAAAACCCATTACACGACGCATATAAAGAAAAATCGCAAATCGCTTCGACTTTACGAATGCGACTACTGCGGTAAATGTTTCACCGACAAAACCGCCTTGACTATCCACATCAGAGTTCATACTGGTGAAAAACCATTTCGGTGTAAATATTGTAACAAGAGCTTCAGGCAGAAAAGTTACCTCCAGTATCACGTGGCCAATCACCTCGGAAGAAACGACTACGAATGCGGCGTTTGCGGATCTCATTATACGTCCAAGTTCAGATTAGCAGCTCATATAAAAACTCACCTTTTTGGCAAACAGTATCCGTGTCAGTTTTGCGGTAAACGTCTCATGTCTCGGCAGACGCTACAAGATCATCTGAAAATTCACACGAAAGAGGGTTTATTTCAATGCGATATTTGTACCAAAACTTACCTATCATACAACAATCTCCGTAATCACATTCGTAAACATAATAACGAGAAGCCCTATTGTTGCGCGTACTGCGACAAAAGATTCATCGAAAAAGGTAACATGAAACGTCACATCCAaagccattttcaaaataaaatctccTGCGAGTATTGCCACAATGAATTCGCCGTCGGGTATTACCCGGTCCATCTACGTCTTCATACCGGAGAGAAACCGTACGAATGTCAATACTGTGGTAAAAAGTTTACTCAGTGCTCCGGCTTGAAAGATCACGTCGTCGCTCATACCGGCGAAAAACCATACCAATGCGAATTCTGTTCGAGGAAATTCGCGTACAAATCACATCAGAAAAGACATCTAATCACTCATACCGGAGAAGGAACTCATCGTTGCGAATTTTGCGCCAAGACTTTCTTTACCAAGGCTCTATTATCGAATCACTTTAGAACGCATACTGGAGAGAAGCCGTTCAGTTGTAACAAATGCGGAAAACACTTTAGTCAAAGCTCTAATCTGTTGGCCCATTATAAATTACATAGCGGTCAAATTAAACCTTTTAAATGTGATAAATGTGATCTGAGATTTTACACCAAGTCCAAattaaattaccataaaaCTTCGCACGGTAACGAGAAACCTTTCGTTTGTAGCATTTGCCAGAAAACTTTCAAACACCGGTCTTCGCTAAATTTTCACGTTAGTTCACATTCGTCCACCGATAGCATCAAATGCGCCGCTTGTAATAAGACCTTTTCGTCGAAATCTAATCTTAACCGACATATTACTAAACATATGGTAGAAGAACATGTATTCATCTCCGAGACTAATTTATGA
Protein Sequence: MEFIDEIVDSHPATDEDTVVSQNEILQSLFHLTDIAKNMLHVDDVVYNIIEEQKQNEKSQSSFIEDNEYVDETDGTDLAVVVNNAENDDHLDLCVEEIEEIDDDAIPVGIKVESVYRCDICDQKYDDEADLLKHFEEDYLKCDICDKQFCNKLLHKLHLSTHNNELYECEKCSAVFSVRDNLELHRKAHDNGEIDDFIKETSQSQSSYVCKLCHFTLFSWSELKTHYTTHIKKNRKSLRLYECDYCGKCFTDKTALTIHIRVHTGEKPFRCKYCNKSFRQKSYLQYHVANHLGRNDYECGVCGSHYTSKFRLAAHIKTHLFGKQYPCQFCGKRLMSRQTLQDHLKIHTKEGLFQCDICTKTYLSYNNLRNHIRKHNNEKPYCCAYCDKRFIEKGNMKRHIQSHFQNKISCEYCHNEFAVGYYPVHLRLHTGEKPYECQYCGKKFTQCSGLKDHVVAHTGEKPYQCEFCSRKFAYKSHQKRHLITHTGEGTHRCEFCAKTFFTKALLSNHFRTHTGEKPFSCNKCGKHFSQSSNLLAHYKLHSGQIKPFKCDKCDLRFYTKSKLNYHKTSHGNEKPFVCSICQKTFKHRSSLNFHVSSHSSTDSIKCAACNKTFSSKSNLNRHITKHMVEEHVFISETNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -