Fvir001744.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- SMARCC2
- Assembly
- GCA_900060175.1
- Location
- FIZR01027900.1:21304-26796[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-15 3.8e-12 46.3 0.2 3 44 621 662 619 664 0.95 2 2 6.6 7.3e+03 -2.7 0.0 23 40 723 741 722 741 0.91
Sequence Information
- Coding Sequence
- ATGTTGTCGCTGTCTCCTAAACCTGATGGCGGTCCCaacatcaaatttttcgagtcACCGGAAACAATGGCGTTGTTGGAAGGTGTCAGAACTTGGctcctgaaaaattgtaaaaagcACATACAAGCAGATCCACCAACTACTAAAGGTTTGTCGACATTAATTACTCAACTTATTCAATTTCAAGAAGATAATCTGGGAAAAAACGTTAGTAAACCACCTCCATTGACGAGGCTACCGatGAAATGTTTTATGGATTTCAAACCCGGTGGTGCTCTCTGTCATATTTTAGCGAGcgtgtataaatttaaaagcGAACAAGGTTGGAGGAGATTCGATTTTCAGGTCAGTAAGagTCCGTCCAGGATGGACAGAAACATTGAAATGTTCATGAATGTGGAGAAAGCCCTGatacaaaataaatgtctAATTATGCCGAAAGTTTTTATTCGACCTGATGTGGAAAAGAGTACCAAAGACGAAGTTAAAGATATTATAAAACGACATCAGGGATCTGTAACAGATAATGAAGACGAAGCAACGCATGTAATATACCCCGAAGTGAAACTCTCAGACCAAGAATATGCTCGAGCAGTATTTCGAAATAAAGAGAAGTGGACATTGCTGCACTGGTATTATTTTCCAGATTCGCACGATTCTTGGGTGAACAGCGAAATTCCAGTGGACCCTCCAGAATTACCACCATCGTATAACGTTAATGCGAAATGGAGGGTTACAGCAGCATGGGCGACTGATTTGGAACAGTATAACGAATGGATGTCGGAAGAGGATTACGAAGTCGATgaaagtggtgaaaaaaaagtgcataaGTTTCGTTTATCAGTTGATGATTTGATGTCTACAATGGATCCTGaccgaagtaaaaaaaaacagaagcgTAAAAGATCGCCCTCTCCAGATTTACGCAAACAGTTGAAGCGAAAAAGTACTCGCGGACCATCGGCGTCCTCTGctccatcatcatcatcgtcatcttcATCtataaacgcaaaaaaaattaaaaatgacgaTGACAGCAGTACGGACGATTTAACCAAAGATATGGAAGAACCTATACCAGAACCTAATATTcaagaaataaatatatcaaaaCTAGGTGCCTCTTCGTCTAAAAAAGACAACGATACGCAACCTTTAAAAATCGCTACATTAACTGACCTTGATGAAGAAGTAGACAAAGGCGAAGATAGTCAAACGACAAAAATTACCGTTGATCCAAGCAATCAGGATGCATCAGTGAAAGACGAAGGCCAAGAAGACAACGTCACCGAGCAAACTCATCACATTATTATACCCAGTTACGCGGCTTGGTTTGATTATAATTCCATTCATATGATCGAGAAAAGAGCACTGCCCGAATTCTTCAACGGGAAAAATAAGTCTAAAACGCCAGAAATTTATCTAGCGTACCGTAATTTCATGATAGACACGTATCGTTTAAATCCGACCGAATATTTAACGAGCACTGCGTCTAGAAGAAATTTAGCCGGCGACGTTTGTGCAATTATGAGAGTACACGCTTTCTTGGAACAATGGGgattaattaattatcaaGTGGACGCTGACAGTAGACCTACTCCGATGGGACCTCCTCCAACATCGCATTTCCACGTACTCTCTGATACGCCGTCTGGTTTACAACCCATTAACCCACCCAAGACACCTCAACCGTCAGCCGCTAAAACTTTACTTGACATGGAAAAGCGTTCTGAACCTTTAGCAGCTACCGTGAAGAAACCTGAACATTTAGACGGCAACGTCAATTTCGGATTAAGATTAGATCAATACAATAAACGTGCTGgtttactgaaaaataaatctgcAGCTGGCTTGACTAGAGATTGGACGGAACAGGAAACGCTTTTACTATTAGAAGCTTTGGAATTGTACAAAGATGATTGGAATAAGGTTTGCGAACACGTAGGCACTCGCACTCAAGATGAATGTATCCTACACTTTTTGAGATTACCCATTGAGGATCCATACCTAGAAGATTTTGAGAACGGAGGTGCTCTCGGACCCCTCGCTTATCAGCCAATTCCATTCAGTAAAGCAGGGAATCCGATTATGTCAACTGTTGCTTTTCTGGCTTCAGTTGTTGATCCTAGAATCGCATCTACCGCTGCTAAAGCCGCCATGGAAGCGTTCGCCGAAATTaaaGATGAAGTACCCGCTTCTTTGATGGATTCACATATTAGAAACGTCGAAGCTTCGATGGTTGATGGTAAATTTGATCCAACAGCCGGCTTACTACAGAGTGGCATAGCTGGTACCGAAAAGGAGGACGATGCTGCGACtgataaatcgaaaaaagagcCTGGTGTAAGTAATGCGGAAATGACATCGACTAAAACTGGCACCGGCGTTGGTAGCGCCTCGTCGCCGCCTGAATCTGAGAAATCTGCGTCAGAATTGTCGGCAAGCAGAGAAGCTAAAGATTCATCTGTTGAAAAACAGACGCCAGTAGCTAAAGATGATGAATCGTCTTCGGCCACGGACGTatctaaaaaagaaacaaccaCCACCGATGAAAATGGTGCCGAGTCTAATAAAGAACAGAACGAGCGTACTAAACTAATTAAAGACGCGCAACTACAGTCGGCTGCGGCGGCTGCTTTAGCAGCGGCCGCTGTGAAAGCTAAACATCTGGCAGCGGTTGAAGAACGTAAAATCAAATCGCTGGTAGCTTTGCTAGTTGAAAcgcaaatgaaaaagttaGAAATTAAGCTACGTCATTTCGAAGAACTGGAAACAACGATGGAGAAGGAACGAGAAGGATTAGAATACCAACGTCAGCAACTAATTACGGAGCGTCAACAGTTTCATTTGGAGCAAATTAAAGCAGCCGAATTTCGTGCTCGCCAACAAGCTCAACAACGCACCGCAGCTGCCGCTGCCGCCGCCGCTGCAGCCGCAGCTGCCGCCGCTGAACAACAGCagtaa
- Protein Sequence
- MLSLSPKPDGGPNIKFFESPETMALLEGVRTWLLKNCKKHIQADPPTTKGLSTLITQLIQFQEDNLGKNVSKPPPLTRLPMKCFMDFKPGGALCHILASVYKFKSEQGWRRFDFQVSKSPSRMDRNIEMFMNVEKALIQNKCLIMPKVFIRPDVEKSTKDEVKDIIKRHQGSVTDNEDEATHVIYPEVKLSDQEYARAVFRNKEKWTLLHWYYFPDSHDSWVNSEIPVDPPELPPSYNVNAKWRVTAAWATDLEQYNEWMSEEDYEVDESGEKKVHKFRLSVDDLMSTMDPDRSKKKQKRKRSPSPDLRKQLKRKSTRGPSASSAPSSSSSSSSINAKKIKNDDDSSTDDLTKDMEEPIPEPNIQEINISKLGASSSKKDNDTQPLKIATLTDLDEEVDKGEDSQTTKITVDPSNQDASVKDEGQEDNVTEQTHHIIIPSYAAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTPQPSAAKTLLDMEKRSEPLAATVKKPEHLDGNVNFGLRLDQYNKRAGLLKNKSAAGLTRDWTEQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDFENGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRIASTAAKAAMEAFAEIKDEVPASLMDSHIRNVEASMVDGKFDPTAGLLQSGIAGTEKEDDAATDKSKKEPGVSNAEMTSTKTGTGVGSASSPPESEKSASELSASREAKDSSVEKQTPVAKDDESSSATDVSKKETTTTDENGAESNKEQNERTKLIKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQIKAAEFRARQQAQQRTAAAAAAAAAAAAAAAEQQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01263299;
- 90% Identity
- -
- 80% Identity
- -