Fvir001832.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_900060175.1
- Location
- FIZR01020779.1:21009-23396[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 1.4e-14 53.6 0.1 1 44 11 55 11 56 0.96 2 2 3e-18 1.4e-15 56.9 0.0 1 43 469 512 469 514 0.95
Sequence Information
- Coding Sequence
- CTGAGTCCGTTGGCTGGAAGACGTACGTATACGGAGGAAGAACTGCAACTCGCACTGCGCGATATACAAAGCGGTAAATTGGGCACTAGAAGGGCGGCGGTAATTTACGGCATACCTAGATCTACGTTACGAAACAAAGTGTATAAATTAGCTATGGAAAGAAAAAGCGATAACGCTGCCATATTTCCCAGTTTAACGACGGAAGATAAACGCTTAGACGAGACCGATTTACCATCCGATGATAAGGAGGAATCGGAAGAACGGGACGACGAagatgaaatggaaaaagaacTATCGCCCGCAGAAGACGACAAAGATACGGAAAAACCGTTCATTAAGCCATCAGTATTCACAGTCGAAGATCTCTTTAGACTTCCGAAACTGGCGGGTGGTCCGCTGATGGAAAACGATTCGTTGCGCGCTCTACTGCAACACGGTAGTAAATTTCTGCACGAACAAAACCTCAAACAGGAGAAAGACTCGACGACGGatcgacaacaacaacaacagcaacaacaacagcagcaacaacaaaGCCAAATGCGGACGCCATTGTATTCGATATTTCCGCCGGGTCACGCCGAGATCTGGGGTAATCTAGATCCTACTTCCATCACACCGTATCTCACCCAGTTCATGGCTCTGTCCGGAGAGAATTTGAATATTCCGTCGTTGATGGGCCATACAAATccttatttcaatttacaaaaccAAACGCCTCCGAGTGACAGTCCAACTGATGTGTCGCCTACGTTTAGTCCGAAGTTCCCATCGCCTCTGTTTCCGGAACTCGTGCAACGTATGTTGGCCGAGTCGAAAGAACGACAGAATTCCGTTAAAACGGAGTCGTCGTTTTCGTCGCCACCCAACGACAGCCAAGAAGAAACCAGCAGTATACCGTCGTCGAATACTCCCAATCGAATACCTATGTTTAAACCGCCGTATAAAAACGGTTCGGCCGGCGAGTCCAACTTCAACATTCCAGATTTCAACGTTGACAATAAAATGTCCGAGGGTTCGGAGAAAAGCGTTACGTCGTCACCTCCACCGATGAGCGGCGCTCGTAGCGATTCTTCGTCACCATTACCCATGAACCACCTTAAACTAGGGATAAATTTACGCGATGCTATTGTGAAAACCATCGGTCAACGGTTTCAGCAACCGCAAGACATACCAATCTCGCATTTGGCCGCTGGTACATCGAATATCGAAGGTCTGCACCGAGTCAGCTTTCCAACGCTGTCCGCTACTTCAGTGATAAAAAGCCATAGCGGTATGGACGCCGAagatgctaaaaaattatgtaaccAAATTAAAGTTCCTTTACCTTCGTCGGCGTCCAATGCGAATTCGGCCAATAGCGGAAAAGGTACGAGACCGAAACGCGGCAAGTATCGTAATTACGATCGAGATAGTTTGGTCGAAGCTGTCAGAGCCGTTCAACGGGGCGAAATGAGCGTGCACAGAGCCGGCTCATACTACGGAGTTCCTCATTCCACCTTAGAGTACAAAGTGAAAGAAAGGCATTTGATGAGGCCGCGCAAACGCgaacccaaaaatcagcccgaTGACTTGAAACGACGAGAAGACGGTAGCGTGCTCAGATTATCGGTTAATGAAAAACCAACCCAACATTCTCCGTCCCCTcaaccaaaaatcgttaaaccACCGTTTACTACTCCTCCTTCGTCATTACCGACCACTCCGAATGGTATGAAATTACCAGCTTTGTTCGATACGCCTCATCCGTTCGCGCCTACGACACCGTTTCCATTTTGGCCAGCGCCTTTCCATCAATTAGCCATGGATTATTCCAGGAATCCAACCTTCTCGCCGAATACCGAACACGCTGTGTTAGCTTCGCATTTCATGCAACGCATGCAAGAAGAATCGGCCAAGAATAATCAGCTGTCTCATAATTTACTAGGCAAGAGTGCCCGAGAGGTGGCCGAAAGCTTATACGACGGGTCCGGCTTTAACGGTAGTTTCTTAGACGGCGTTATCAGATCTAGTCTCGACAGTGATCAAACTTTCAACGAGCATCTCCAAAGAAAGATTCTGCTCGATCAGTTGTCCAGAAGTAAGTACCAGAATCCAATGAACAAACAGTCTGGCGAATCGGACGATGAAAGTACCGCTAAACCAAATATCAATCACATACTTGCGCAAAATCTTTTATCCTCCGGTATCGTTAAAGACACCAAAGATACCGCTGCCAAAAGTGTCGATGACGAAATGAACAGTGATGATAAGGCTGATCAATCTTCAttagatgaagaaaaaactgcCAGTGTTAAAGAGGAACCCAATAATGTTAATGTACAGAATCAGAGTTTTAATCTAGAATCTCAAATCGCCgctgttgaaatgaaaacggAAAAGAACTGA
- Protein Sequence
- LSPLAGRRTYTEEELQLALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERKSDNAAIFPSLTTEDKRLDETDLPSDDKEESEERDDEDEMEKELSPAEDDKDTEKPFIKPSVFTVEDLFRLPKLAGGPLMENDSLRALLQHGSKFLHEQNLKQEKDSTTDRQQQQQQQQQQQQQSQMRTPLYSIFPPGHAEIWGNLDPTSITPYLTQFMALSGENLNIPSLMGHTNPYFNLQNQTPPSDSPTDVSPTFSPKFPSPLFPELVQRMLAESKERQNSVKTESSFSSPPNDSQEETSSIPSSNTPNRIPMFKPPYKNGSAGESNFNIPDFNVDNKMSEGSEKSVTSSPPPMSGARSDSSSPLPMNHLKLGINLRDAIVKTIGQRFQQPQDIPISHLAAGTSNIEGLHRVSFPTLSATSVIKSHSGMDAEDAKKLCNQIKVPLPSSASNANSANSGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNQPDDLKRREDGSVLRLSVNEKPTQHSPSPQPKIVKPPFTTPPSSLPTTPNGMKLPALFDTPHPFAPTTPFPFWPAPFHQLAMDYSRNPTFSPNTEHAVLASHFMQRMQEESAKNNQLSHNLLGKSAREVAESLYDGSGFNGSFLDGVIRSSLDSDQTFNEHLQRKILLDQLSRSKYQNPMNKQSGESDDESTAKPNINHILAQNLLSSGIVKDTKDTAAKSVDDEMNSDDKADQSSLDEEKTASVKEEPNNVNVQNQSFNLESQIAAVEMKTEKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -