Fvir003065.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- bab2
- Assembly
- GCA_900060175.1
- Location
- FIZR01019453.1:13823-17082[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 6.1e-09 35.6 0.0 1 39 490 529 490 533 0.90 2 4 4.3e-11 2e-08 34.0 0.0 2 39 545 582 544 585 0.92 3 4 1.5e-18 6.9e-16 57.8 0.0 1 45 599 644 599 644 0.97 4 4 1.6e-15 7e-13 48.2 0.1 2 43 652 694 651 695 0.95
Sequence Information
- Coding Sequence
- ATGGCAAACATCGGACAGCACTATTGTTTACGATGGAATAATTATCAGTCGAATATGACGTCGGTGTTTTATCAATTACTACGCACCGGAGCTTTCGTCGATGTCACATTGACctgtaatgaaaattcactGAAAGCACACAAGGTAGTTCTGTCAGcgtgtttttcgtattttcaaaaattacttacagATAATCCGTGCAAGCATCCAACGATAATATTACCGCAAGAAGTCGGCTtcaatgatttgaaatttataatcgaTTTCGTTTATCGAGGCGAAATTAACGTTTCAGAAGCCGAGTTACAAAGTTTACTAAAAACTGCCGATCACTTGAAGATCAAAGGTCTTTGCGAAGTTCCAGAAGGTGAAGAAGACGAAATGGACGAAACCGGTTGCGGTGGCGAATCTGTAACCGATGTTAGCGTGTTAGGTGCTCATATGATGATGATGCATCATCAAGATAAATCGtctacgtcgtcgtcgtcgtcgtcgtcgtcaccgCACAAACACCAGCAAAAAATACTCACCAAGTTGAAACCGGTTGTCCACAAATTCGCGACGAACATCAAACGCAAACATCTACCACTTCAAGATATAAATAACTCTAGAAAGTATTTCATTAAGGATACAAAAACCAACTCCGGTGCTCATATCGATCAACAAGGATCAGTACAATTGATTCAAGCTAGTACTATCAATCCCAATGATATTCTAGACACCGCTAACAACACTCAACAACCTGCGGGCAACTGCATCACAGTAGCAACTTCCACCGAAGAAGACGATAAAGTTAAATCGCCCACAACCAACAACGTACCTGTAGTTATATTAGATAATCGACATCAGCAACAAATCTCAGCGCCGGTTGCTTCGTCGTTACATTACGTCcaacaaaataatcaacaacaacagcaacaacaacaaaggTGTCAACAagcggaaaaaattatcatgacCAGTCCATCGCCCATGGTGACCTCCTGTACAACGCTGACAACGCTACAACCTCAACAACCTTTattaattgatcaaaatggCCATCATCTTGGACCTCCACCGCCTCAGTTGTCGAATCCTGAGGATAATAAACAAACCGATGTTGAAATGATGTCCGAAGGGCAGCCTCCGGGACCAACAGCTACTCCTGTACATTGTCATTCGATGGAAATGCAACAACATAGTCCGACTCATCGAGATATTGCTGttgATACGTCAAGTATGCAAACCGATGACATGAAagttaaatttgaaacattgaGGACCATGGATCAAACTTCTGACAGTATGGATACGATTGAAAATCACATGTCCGAGCATAGCATGAACGACGATGAACATACGATGCAAACGATGCTTATCACACCGGAATTACTAGGACTGATACCATCCACTTCATCGGCACCTTCATCTgAAGTCGGTAGCGATAATGGTAAAAACAATTTGACAATGTCGAAAAAAGACTGGACTCAAGAAGACATGGAAGCTGCTTTAGACGCCCTTCGTAGCCATCACATGAGTTTAACCAAAGCATCTATAACTTTCGGCATACCATCGACTACTTTATGGCAAAGAGCTCATAGACTTGGAATAGATACGCCAAAAAAAGACGGACCATCTAAATCTTGGAACGAAGATGTTCTTAACGTTGCACTGGATGCTTTACGAACCGGATCTATAAGCGCTAACAAAGCCAGTAAAGCTTACGGTATTCCAAGCAGTACGTTGTACAAAATAGCGAGACGAGAAGGTATTCGATTAGCAGCTCCATTCAACGCGGCTCCTACGACGTGGACTCAAGATGATTTAGAGAGAGCTCTGGAAGCAATCAGAACTGGACAAACGACCGTCCAAAAGGCAGCTACTGAATACGGTATTCCTACTGGTACACTGTACGGTCGTTGCAAAAGAGAAAAGATCGAGCTATCTCGTAGTAATCCAACACCTTGGTCTCAAGATGCCATGTCTGAAGCATTAGAAGCTATCAGATTGGGTCATATGAGCATTAATCAAGCTTCCATTCATTATAACCTACCTTATTCATCATTATACGGTAGATTCAGACGAGGTAAATACGAAGCCGATCATCCAGATCACGAAGACGACAGTACGAGCGGAGTGGTCGTCGACGTTCAACCCAGTGGCAgtcagcaacaacaacaaatgGTTCAACAGACTCACGCTAGTGAAATGCAACAATCTGAACCAACTTCATCTCAATCTCAACAACAAGCGGCTATTCAACCGCAGATCATGTTGTTACAATACCAGCATACTCCAGCTACACATATCCAAATGTATCAGCCGGCGGCGCCCAGTTGA
- Protein Sequence
- MANIGQHYCLRWNNYQSNMTSVFYQLLRTGAFVDVTLTCNENSLKAHKVVLSACFSYFQKLLTDNPCKHPTIILPQEVGFNDLKFIIDFVYRGEINVSEAELQSLLKTADHLKIKGLCEVPEGEEDEMDETGCGGESVTDVSVLGAHMMMMHHQDKSSTSSSSSSSSPHKHQQKILTKLKPVVHKFATNIKRKHLPLQDINNSRKYFIKDTKTNSGAHIDQQGSVQLIQASTINPNDILDTANNTQQPAGNCITVATSTEEDDKVKSPTTNNVPVVILDNRHQQQISAPVASSLHYVQQNNQQQQQQQQRCQQAEKIIMTSPSPMVTSCTTLTTLQPQQPLLIDQNGHHLGPPPPQLSNPEDNKQTDVEMMSEGQPPGPTATPVHCHSMEMQQHSPTHRDIAVDTSSMQTDDMKVKFETLRTMDQTSDSMDTIENHMSEHSMNDDEHTMQTMLITPELLGLIPSTSSAPSSEVGSDNGKNNLTMSKKDWTQEDMEAALDALRSHHMSLTKASITFGIPSTTLWQRAHRLGIDTPKKDGPSKSWNEDVLNVALDALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQDDLERALEAIRTGQTTVQKAATEYGIPTGTLYGRCKREKIELSRSNPTPWSQDAMSEALEAIRLGHMSINQASIHYNLPYSSLYGRFRRGKYEADHPDHEDDSTSGVVVDVQPSGSQQQQQMVQQTHASEMQQSEPTSSQSQQQAAIQPQIMLLQYQHTPATHIQMYQPAAPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262654;
- 90% Identity
- iTF_00725668;
- 80% Identity
- iTF_00725668;