Fvir016420.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ferrisia virgata
Gene Symbol
JARID2
Assembly
GCA_900060175.1
Location
FIZR01004348.1:16659-23424[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-22 1.3e-18 67.3 0.0 6 89 1128 1209 1124 1209 0.93

Sequence Information

Coding Sequence
ATGGTGGATGGGAAAAAGAATATccCAAGCACGAGTTCTCGACCAAcgagaaaaacaaaagaagCGGCTACTCTGTACATGGAAACGCTTGGTAAAGATTTGCTTCGCGGAGATGAAAGCTGCGATGAAGATGATTTATCAGTGGAAAACTTCTTCGAAATACCTAGCATTGATCCTGCGAAaccgaaaaaagaaatcaaagaGCAATCAAAGAAACTCAAAGCTGCTGATTTGGTTAAACGAAACgcgcaaaaattaaataaaaatctcgttaataaaaaaattccaaagaaagtatctgacaaaaattataaatcagttaagaaaattatcaagaaagataaaaaagtaattgaaaaattgaacgatgaattgaaaaaaatcgttgaagaTAAGcctttaaaagaaaaattggaaaatattacTAAATCGATTATTATAGATAAAGAATTGGAAACCATTGACCAAACATtgagtaataaaaaaagtgaagaagtAAGCAATTCGTCGAAATCGTGCACTGTTGAATCTAGCAAGGATAAGAAAGAACCGGTGGTAGATAAACATAAAGATAATTCATTGGAagtaaatcaaaattcaataacacccgataaaaaaactgagaaaTTTGAGATCCCGATAGACTATGACggaattgaaaatatcgatattccTGAATTCGTCGTAAACAGTAAAGATGACCgggagaatatcaaaaatcatactctatcaaaaaatgtatctcttgaacataaaattaagaataatgtcccgaaaaaagataaaattgttgtcgaaaatattgaaaatattcttctGCCTGAAGCGaccgaagaaaaaagaacagaagTCACAAATACTGCACAACAGAAAGAAAAGATCATTACAAATTCTAAGAAAACAAattcattgaaaaaaccagtagaaaaaaaactaaagtcGGAAGTATCGCTGAAAAACTCAACAGAGAAAACAGATAGCGTCGAGACTCCGTTGAAAACtcctgttgaaaaaatagaaaagtcgGAAGCATTATTGAAGaaatcgatagaaaaaaatgatcacatTGAAGTTCCTTTGAagaaaccaaacaaaaaaacagaaaaatctgaaactttggggaaaaaatcaacagaaaAAGTAGATAAAATAGAAGTGCCGCAGAAAAAACCAATtgagaaaatagaaaaatcaaaaattttatcgaaaacaCAAGCAGcaaaagataaaaaagaacttttggtgaaaaaatcgtctgaaaaattagaaaaatcagaaaCTCCAGTTGAAAAAACAGCGGAAAAAACAGtagttttgttgaaaaaaccatctgaaaaattagaaaaatcagaaaCTTCAGTAGAAAAAACAGCGGAAAAAACAGtagttttgttgaaaaaaccatctgaaaaattagaaaaatcaggaACTTCAGTAGAAAAAACAGCGGAAAAAACAGtagttttgttgaaaaaaccatctgaaaaattagaaaaatcagaaaCTTCAGTAGAAAAAACCGCAGATAAAGCAGAAAAGCTACAGACTTCAAACCCTCTTACGAAAAATTGTCTGAAAAAACCGGccgaaaaaatagaaaaaccaGAAATTCTTTCGAAGAAACTTGCTGAGAAAGTAGAAAAATCAGACATTCTATCAAAGAAACGAACCGAACAGCCAGCAATTTTGGATATTACAACGAAAAATTGCTTGAAAAAACCTGCagaaaaaacggaaaaatcgACTTCCGCTCCAAAGCAAAATATTCCTGCGAGTAACGTGAAAGATGGTGAAAAAGAGCCAACTGTAGTTGAGAAAAGTCTCCCGcataaaattacaatgaaaACTGGCGAAAAAGAGACGCCAAATGTTGAAGAGAATATTCCTTCTACGATTCcaccgaaaataaaaaatgtagagaaaCCTAAATCGGATAACTCTACAGATGAAGAACATAAAACGAATGAGAAGAAACCAATTTCGGAAACAGATGGCAAAACATTGATTACCAAGAAGAATCTCAATCGTAAGAAATCATCAGTTAAGATCATTCGAGCTAAAAATATCAAGCTCGATAGAGAAGGcgagaaagaagaaaagacTGCTGAATTGGTCACTGTATCGGAAACGCTGAATGTTGAGGATTCAGTAAcagaaagtaaaataaatgatagGCCTCTCATTCACGAGAAAGTCGAAGATGATGTGACCACGAAGTCAATACCAAAATTAGTTTTTGCAAATGGTAAACCAACTACAACGGAAGAATGTTCGCAAAAGCCGATTATTCAAACAATTGCGACATCCAGTAGTAAAATGTTTTGTTTGGAaagtaagaaaataatttttaagaaaaacaaaacacccACGGTCACCGATGATAAAGAAGATAGTAGTCCACGTAAGACTGAAGCGTTTTCAGCTGATAATGAAAACAGCGTATACGCTTTTGAACCTGATTTACCTACTACTAGTCCTCCGTTTAGAAGACTGAAACCGGTTACGCCTCCGAAATCGCTTATTAGCGGTAATTCTATAGCTGTACAGGTTAATTTTGAGAGCAACGCAAAAATAGAATGTTCTAGTTCATCGGAGACACAAGTATCTTCTACAACTGATTGCGATGATCGAGTATTTTACATACCGATACAAACTTCAGATACAAATAGTACTCTGGGCGTTGCTGTCAAATTAGACACAGATGGAGCCAACCAGAAAATAATCATGAGCGCTACATTGGTTACCAAATCACCATCATTTACCACTTCTACCGCTACTACTGTCGCAtcgaaACCGATCACATTTGAATCGAGCACTCCACAAATAATCGAACATACCGAATTACCGAAGAAACCAACATCCgaagaaaatattgataaaattgtgGCAACGGCGGATTCGCAATCATCTGCTCCTCAAACACCGATTGATTCTCCTTCTTCGACAGTTGTTTCTccaaaatcgaataaaaaagttaGTTCTACTACTTCCATAGCTACTACTTCTTCAAAAGCTAATCAGTCAGTCAAGATTGTGAAAATCAACAAAGTCAAGAAACCTTTACCTCCGAAACCTAAGCCTAAGCCGGTGAAATCTAAAAGTAGTAAAAGTAAACCTGCTGAagttactaaatctacaccaAGTACCTCGGCCAATGAAATATTGGAAGCTCCGACATTTTACCCTTCTGAAACGGAATTCAACGATCCACTGAAATATATCGATACCATACGATCagttgctgaaaaatttggtgTTTGCAGAATTGTTCCTCCTTCTACTTTCAGAccTGAATGTAAAGTTGCGGATGAGATGAGATTTACCGCTTACAATCACTACGTACATAAGATGTTACATCGCTGGGGTCCTAATGTCAAAGAAATGATGGCCATTAGAAAATTCCTCGCAACGCAGAATATTCAATTAACTCACGCCCCTttgATTGGTGGAATGGAAGTAGATTTACCTCGCTTGTACCAAATTGTTCAGCAATGTGGTGGTCTAAAAGCAGtcattgaaaaagaaagatgGCATCAGGTGGCTGATGTTATGAAAATACCGAAACTTGCTCAAGATCGAATTACTAAATTAGACGATATTTATTGCAAATATTTGCTACCTTATGATATACTTCCCCATGacgaaagagaaaaattattcgatgaAGTAGAAAAAGACTGGaatgttcatttaaaaaatcctaATGACGATAATGAAGTGTTTGACGATGTCGACGAATGCATCGTTAAAgGTCGTACGATGCCTTTGAGCTGTTTTTATCGTATAGCTCGTAATACGATGATGATGTGTTTCGGTAGTACCGAAGGCCAAGAAGGACCTTCAACCGAAACCATTGAAACGGAATTTTGGAATCACGTGTCTCAACGTAAATCTCATATATGCGTGCATTCTGGCTCCATTGATACCGGTGTCCACGGGTATGGGTTTTCGACGGCGAAAAATAGTACGTTTCGGAAACACCCGTGGAATTTGAAAGTATTAACGAATAATTCGGCTTCCATTTTAAGATCTCTCGGTCCAATAATGGgcgTTACTGTTCCTACGTTACATGTTGGTATGCTATACTCAGCATGTTGTTGGTATCGCGATCCTCATGGATTACCCTGGGTTGAGTACTTGCATACTGGagcaaataaaatttggtatGGAATACCAGACGAGTTTAGTGAGCAGTTTAGTAAAGCAATGCGTGTTTTGGTACCAAGGTATTGTCGAGATAAAAGACTGTGGCTACCGTCAGATACGGTCATGATACCTCCACCTTTATTGGCAGCTCAAAATGTACCTTTATCCAGAGTTGTTCAACAACCAGGACAATTCATTGTTGTATTTCCTAAAGCGTTTACTTCTTGTATATCAACTGGCTACATGGTCTCTGAAAGTGTGTACTTCGCTCACGCTTCATGGCTAAATTCTGCGAAACAAATATTCTCGGATATGCAAGAAAGTTGCGAACCATCTGTATTTTCTTTGGAACAGTTACTTATTAGCGTAGCTACGGATGTTCGAGTTAGTTTTTTGATCCTGGGCCAGATATTACCTTTACTGGTTGAAGTTCACGATACGGAAATTGCATTAAGAAATCAGCTCGTAAAATTAGGTTTAAGCACTTcgcaattgaaaataaataaaaaacgtaaacCTAAAGCGTCGTTTAATGATGAAGATAATTACGAATGTGAAGTTTGCCGAGCTAATCTTTTCCTGTCGTTGgtaatGAATTCTCACGACGAAACAAATTATTGTTTAAAACACGCTGTGAATCTATTACAAAAGAAGCCGGCTCAAGTGAAACATTGTAAATTGATGTATGCTTATACCGAGGGAGAATTAGaggaaattattaaaaaaattcaagaaaaaatagaaactaAAAGCAGTCGTAAACCGAATCCGAAACAGAATTCGAACTGA
Protein Sequence
MVDGKKNIPSTSSRPTRKTKEAATLYMETLGKDLLRGDESCDEDDLSVENFFEIPSIDPAKPKKEIKEQSKKLKAADLVKRNAQKLNKNLVNKKIPKKVSDKNYKSVKKIIKKDKKVIEKLNDELKKIVEDKPLKEKLENITKSIIIDKELETIDQTLSNKKSEEVSNSSKSCTVESSKDKKEPVVDKHKDNSLEVNQNSITPDKKTEKFEIPIDYDGIENIDIPEFVVNSKDDRENIKNHTLSKNVSLEHKIKNNVPKKDKIVVENIENILLPEATEEKRTEVTNTAQQKEKIITNSKKTNSLKKPVEKKLKSEVSLKNSTEKTDSVETPLKTPVEKIEKSEALLKKSIEKNDHIEVPLKKPNKKTEKSETLGKKSTEKVDKIEVPQKKPIEKIEKSKILSKTQAAKDKKELLVKKSSEKLEKSETPVEKTAEKTVVLLKKPSEKLEKSETSVEKTAEKTVVLLKKPSEKLEKSGTSVEKTAEKTVVLLKKPSEKLEKSETSVEKTADKAEKLQTSNPLTKNCLKKPAEKIEKPEILSKKLAEKVEKSDILSKKRTEQPAILDITTKNCLKKPAEKTEKSTSAPKQNIPASNVKDGEKEPTVVEKSLPHKITMKTGEKETPNVEENIPSTIPPKIKNVEKPKSDNSTDEEHKTNEKKPISETDGKTLITKKNLNRKKSSVKIIRAKNIKLDREGEKEEKTAELVTVSETLNVEDSVTESKINDRPLIHEKVEDDVTTKSIPKLVFANGKPTTTEECSQKPIIQTIATSSSKMFCLESKKIIFKKNKTPTVTDDKEDSSPRKTEAFSADNENSVYAFEPDLPTTSPPFRRLKPVTPPKSLISGNSIAVQVNFESNAKIECSSSSETQVSSTTDCDDRVFYIPIQTSDTNSTLGVAVKLDTDGANQKIIMSATLVTKSPSFTTSTATTVASKPITFESSTPQIIEHTELPKKPTSEENIDKIVATADSQSSAPQTPIDSPSSTVVSPKSNKKVSSTTSIATTSSKANQSVKIVKINKVKKPLPPKPKPKPVKSKSSKSKPAEVTKSTPSTSANEILEAPTFYPSETEFNDPLKYIDTIRSVAEKFGVCRIVPPSTFRPECKVADEMRFTAYNHYVHKMLHRWGPNVKEMMAIRKFLATQNIQLTHAPLIGGMEVDLPRLYQIVQQCGGLKAVIEKERWHQVADVMKIPKLAQDRITKLDDIYCKYLLPYDILPHDEREKLFDEVEKDWNVHLKNPNDDNEVFDDVDECIVKGRTMPLSCFYRIARNTMMMCFGSTEGQEGPSTETIETEFWNHVSQRKSHICVHSGSIDTGVHGYGFSTAKNSTFRKHPWNLKVLTNNSASILRSLGPIMGVTVPTLHVGMLYSACCWYRDPHGLPWVEYLHTGANKIWYGIPDEFSEQFSKAMRVLVPRYCRDKRLWLPSDTVMIPPPLLAAQNVPLSRVVQQPGQFIVVFPKAFTSCISTGYMVSESVYFAHASWLNSAKQIFSDMQESCEPSVFSLEQLLISVATDVRVSFLILGQILPLLVEVHDTEIALRNQLVKLGLSTSQLKINKKRKPKASFNDEDNYECEVCRANLFLSLVMNSHDETNYCLKHAVNLLQKKPAQVKHCKLMYAYTEGELEEIIKKIQEKIETKSSRKPNPKQNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-