Fvir006962.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- ARID5B
- Assembly
- GCA_900060175.1
- Location
- FIZR01010280.1:1047-9708[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-24 2e-20 73.1 0.1 2 89 314 399 313 399 0.95
Sequence Information
- Coding Sequence
- ATGATGACCGATGAAGTATTGGCGATTACGGAAAAGGTGATAATTAGATTAGAAGACTTATTGACTTGGATCACAGATGCTTCCGACTGGCATTGGGGACTATCGTCTATATGGACGAAGCAAACCTCCGTCAACAATTATAACACCAACGTCACTAGTACTGCCGCAGATGTTATCAAAACCGAAGAACGTAATTTCGATGGCCATCACGGCGAACGTAAAATCAACGGATCCATGAACGAAGTCGACTGTCAGTCGGGCAATTACATTAGACAAAATAAATCCAATTCGTTGGAAGATTGTTCGGCTATCGATTATTTGGAcgttttgaaagaaaaaacccAACTTGatttaaaaaattgggaaacTCGGACTGGTGTTTTAGTTTTAAGTTACTCGAGGTATTGTCGTTACCGTGCCTTACTAAGACGTCTCGAAGGCGTGCACAATGATTGGCTCAGAGATGATCTTATAACGGCTTTAGGTGGCTTCGCTACCACCTATCGTACtactaaaatattattttgccGGGATACGTTCGATTATCCAGAGCTGGAAGGTCACGAATTATTATGTAACCATTTAGCTCCTAAGTTAAGAAGTCGTATCCCtaagaagaagaaaactttGTATCCATCTCCAGACGTTTCGGACTCCGACGCATCATCCGATTATGGTACAGAAGACGACGAAAGATCTTCGTCAGCCTCGTCGTGTTCATCATCCACCAATTCGAATAACAGCATCGCTGCTAGATTTACTTCCAATTACGAGGTACGAACTGATGGAGATGGTTTTGGCAATAATTTGCTTGAGAGCCATATATTTTACGTGAATgttgcatttttattaaatttttgtgtattCCATTGTCCACAGCAGACTGGTATCAAACGAGCCGATGGTAGGAAATTTCCTTGTAATCAAGTGTCAACTGCTCAACAAGCATTTACTCAAAATCTGTACGCTTTCATGAAAGCTCGCCTTACTCCCATCGGTAGACTACCTCTAATTGGTAACAAAGAAATaaatttatatgaattttacaacaaaGTAAAGTTACTAGGAAGTTACGCATCCGtaacgaataataaattatggAAATACGTTTTCGAAGAATTAGGAGGCGATCGTGGAGATCCTTCGATGGCTACGTTGATgagaaaatattacgaaaaaTTTCTATTACCTTACGAGCAACATATGTTACAACAGTTGAAACATTCGTCGGCCAATCAATCAACCAGTGCCGGCAGCGGAAGTGTTATTAAATCTTGCTCACCATCACCGACGTTGAACGCCGATTATCGATACCAAGCGGACAGAAGAAAAGTGGTAACTACAATCAGGCCGGTTCCGGGCAGTGTTCGATTAACGGACGGTAGCAGTAAATCGGGAGCAGTCGTAGCAACGTCGGTAGCGGCGCAGATGGTGATGATGAAACCGTCATCATTGCAGTCGGTAGTGAGCACCGGCGGTAAAGAGAACATTCCGTTATCGAGAAAGCTGTCGTCGGGCGGTTCGACTAATAATTCGGCAACCGCTGAAGTTGTAATTGATCTCTGTGCTGAAGAGGAAGGCTCATCGAAAACGACACCTCCTAGAAAATATAGTCCGACTGAACCCGAAGTGATAGATTTATGCGAAGAGTCGCCCATAAGACGATCCATTCCCTCGATAGCGGCCACTTTACTGCCCAGAAAACGTAAATTAGATATCCTAAGAGAAGGCGGCCTAGAAGTCACTCCGGTAGCTAGTCTCGGCGGTGGTGGCGGTTTCGGTTCGGCAACGATATCGCGGAGACTTCCTCCAGCTTCGGTGGCTATTACAGCCATTAAAAGTGGCGAAACTTCGCTCGAACCTATCAATCCTaagaaaatgcagaaaactcGCTCAGGTCGCGCATCAAACCACGTACTCGATATGAGGATGATGAGAAACGTAAGTGCCGCTGCCGACGAtagcgacgacgacgacgatgacgacgaagaTTCGATCGTGAAGAAATTTAGCCCCAATTTAGGACCTAATATCGAAATATCGCTGGTTGCCAACGATGGGCCGATATCCAGCAGTGACGAAACCGGCAGCGGTGCTTATACCACACGAAGAGACGAGAAGAAGCGTAAATCTATACCTCTTCCTATTCCCGCTTTACGTAAAATCTCGACCGGAGAATTATCGGTGCAGAATTTGACCGATAATGACGATATGTTGTATAAGCCTAAAGTTACGTTCTCGAGCCGGAAAACGTGCTCGGACGTAACGCTAACGAAAGCTCCTAGTAAATCTTCGGTTATCACGGCTTCTGCAGGTAGTGCTGGGAGTGCACAAATGATGAAAGATCGACAAACGCAACCTATAATACAACACGTTAACCCTTCGTTGTATTTGGCTGCATTTTACAATTCCATATTTCCCGAATCAGTTGCAGATACTTTCATATCTGCTCACGAAGAACCCGGTTCTAATAATCCATATCAAATACAACTCACTCAGCAGCAGATTAATTACGTTAAAGGTGCCTTTATGCATCATCAACCGAATCAGGAAATAGAATTAGATAACGCGACTGACGCgtttgctcaaaaatttaccagcatgttgaaaaatggttccGTCTCTATAGTggaaaattacgagaaaattttacccGATTGA
- Protein Sequence
- MMTDEVLAITEKVIIRLEDLLTWITDASDWHWGLSSIWTKQTSVNNYNTNVTSTAADVIKTEERNFDGHHGERKINGSMNEVDCQSGNYIRQNKSNSLEDCSAIDYLDVLKEKTQLDLKNWETRTGVLVLSYSRYCRYRALLRRLEGVHNDWLRDDLITALGGFATTYRTTKILFCRDTFDYPELEGHELLCNHLAPKLRSRIPKKKKTLYPSPDVSDSDASSDYGTEDDERSSSASSCSSSTNSNNSIAARFTSNYEVRTDGDGFGNNLLESHIFYVNVAFLLNFCVFHCPQQTGIKRADGRKFPCNQVSTAQQAFTQNLYAFMKARLTPIGRLPLIGNKEINLYEFYNKVKLLGSYASVTNNKLWKYVFEELGGDRGDPSMATLMRKYYEKFLLPYEQHMLQQLKHSSANQSTSAGSGSVIKSCSPSPTLNADYRYQADRRKVVTTIRPVPGSVRLTDGSSKSGAVVATSVAAQMVMMKPSSLQSVVSTGGKENIPLSRKLSSGGSTNNSATAEVVIDLCAEEEGSSKTTPPRKYSPTEPEVIDLCEESPIRRSIPSIAATLLPRKRKLDILREGGLEVTPVASLGGGGGFGSATISRRLPPASVAITAIKSGETSLEPINPKKMQKTRSGRASNHVLDMRMMRNVSAAADDSDDDDDDDEDSIVKKFSPNLGPNIEISLVANDGPISSSDETGSGAYTTRRDEKKRKSIPLPIPALRKISTGELSVQNLTDNDDMLYKPKVTFSSRKTCSDVTLTKAPSKSSVITASAGSAGSAQMMKDRQTQPIIQHVNPSLYLAAFYNSIFPESVADTFISAHEEPGSNNPYQIQLTQQQINYVKGAFMHHQPNQEIELDNATDAFAQKFTSMLKNGSVSIVENYEKILPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -