Fvir003540.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ferrisia virgata
Gene Symbol
osa
Assembly
GCA_900060175.1
Location
FIZR01027951.1:1-10117[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.3e-26 2.4e-22 79.3 0.0 3 89 571 657 569 657 0.91

Sequence Information

Coding Sequence
ATGGATCGACGAAACGATCGCGATCTCATTATCAAGGCTAGATTCCGATTCGGCGGCCATGGCAACGACCAACAGgaccacgacgacgacgacgtcgacgacgATGCTCGCAATACCTATTGGAACGAAATGATCTTGAGCGATGACACCAAAACGCCTTGTTACGCGTTCCGCCGAGGTAACATATTGTTCACGACCATACCTCCGGCCAGGCAGCAACCGCCTCCGGTTCCAAAATCATGCACAGCTACCTGCAACATCAACCTAGCAGATCGGTCGGATAAACCTCACGGATCGGATTTCTGCGAAGTATGCTGCGGTATCAGAAGTCCCAGCTTCACTCGAAGGGCTCATAGTTTTACAACGCATTTCTGTACCAGAGTTCCCGCTAAGAGAACTCCCAATTCTGTTAGTTCATCGTCCGACCAACGGTCCAAAAGCACCGATAGTAGTCTTAGCTCCAGTATGTCCAGCGTCGGTCACAGCTTCGGCAATTTGCTCAGTAGCCGAGGTCATATTTCACGATTGTCGGCGTACCTGAAGAAGAACGGGCGGCCGTatttcgacgacgacgacgacgacgacgacgacggtcGTTACGAAGAAGCTACCACGTCCGGCGATTGCGCCTCCGAAACGTCATCGAGTTACGAtacgaaatcgaaaaatttgaaaatacgtcCGGCATGCGATAAATGCGGCCTGTCTTCTTCGACTAACGGCACACTAGCGAATGACAGACGACGATCGTCGGCTGTAACCGAATATTCGTCGTTTTCGTCCTCGTATCCGTCCTCGTGTAGCTcgtatttaccatttttcctAGACGAAAGTTGCAGCTCGTCGGCGTGCTGCGATTGCGGTCTCGACTCTACGGTCAGTTCGTTCAGTAATTTACGAACGGCCAGCGTGGACGGCGATCGTAAAGCCGATCAACAACAGCACGAAAAAGCTAGATTCTTCTCGAACGACAGCTCGACCGATTCGGATAACGAAACGTGTAGCTCGGAAATGGGTTGGAGCTTTAGCAGCTTTTGTCAAGCGAACGATAGTCGCAATTTGAGCCGAGCTACGACCGCCGATAGCATTGAGAAAAGTAATCCGCTCAAGACGGAGTGTAACAAACCACTCGGCCAGGCTGTAACTCCTTTTGTATCGAGTTCGAATAGGAAATTGGTCATCGAGAAGTTCGGCGATGTTGTACGCTCGTTCAGAAAACCGGGACATCATGTCGGACCGTCGAAAAATGCCGACTGTTTGTGCGATAATTGCACGTCTTTTTTCTGCAGAAAGTTAGAATTACCATCGAATTCTATCACAGCCGCCGAGCTGAAAGAAGAGTTACAAATAGTGCAGTCGGCTAGTCCGGTTCCAGTAGCTTATACCAGTTTGCAGCCATTTAGACCGTCCAATAATGGTAGACTTTGCGCAAACTCTTCGGTTTCCAGATGCGCTACCGTTACCGGAAAATTGGAAGTTCGTTTAATGGGATGTCAAGACTTATTAGAAGAAGTGCCCGGTAGatcgagaaaagaaaaagaaattttatctaCTCCTAACGATCTCAAGTCTTTCGTAAAAGGTGTCACCGGTAGAAGCTCGTGCAAATCTTATAGCGTTAAGGATGAAATCAGTAGTGAGTTATTCGACATTCGATTCAAACACGACAGTCTAGGAAAACTATACGAAATGGACGACAGCCCGGATCGGCGAGTTTGGCTGGATAAACTGTTACACTTTATGGAAGAACGAAACACACCTATATCTACGTGTCCGACCATCTCCAAGAACCCTCTCGACTTGTTCCGATTGTATATGTACGTGAAGGAAAGAGGGGGCTTCGTGGAGGTATGCAAGGTGACGAAGAATAAAATATGGAAAGATATAGCCGGATTATTGGGTATCGGCGCGTCGTCTAGCGCCGCGTACACGTTACGTAAACACTATACGAAGAATCTATTACCATTCGAATGCCATTTCGACCGAGGTGGTATCGATCCGCAGCCTATAATTAATCAAGTCGAATCGTCGACCAAGAAAAAGAACGCGAAAAACGCTTCGGTTCCTTCACCAGGTACGGGATCGTCCAATTCGCAGGACTCGTTTCCTTCGGGACCTGGTGCTGGAATGGATGGATATGGAGGATACGGCGGATATGGTAACGAATACGCTAATCAAAGAGGTCCGCCTCAGATGCAAAGTAGTCAAGGCATGACTTCGCAACCTGGAGCATACCAAAGTCAACCTGGTTATAATCAGTATCCACCGGCTGATCAGTACGGGCAGCAGTATATGGGTAGCGGATCATATCCGCCCTCTAGACCAATGTATCCCGTTTATCCGCCGGATGGCGATAGAGGATATAACCAAAGCGGCAACAGCAACGCAATGGGCGGCCCCGGAACACCGGGTGGTCCGCCGCAGCCACAATCGGCACCTAGTCCAGCAGTCTCATCGGGTCCCGGTCCAGCCGGCTCAGATCCGTACAGCAGATCTCCTTACGGTCAACCAATGTACCACGCTGCGGGTCGACCGCCTTTCACCGCCGGTGGTCCGGGCGTCGTACCTGGCCCCGGCGGCCAAACGCCGAATAGTCACGTCGTACCATCTCCTCCGCGACCGGATTCGCAACCATCGCCCAGTCCGTATCCGCCATCGCCGCAACAGCCCGGCGCGCCGCCCCAACAATCCGGCGGTCCGCCCGGCCAGCCGCATATGGGCCAACAGCAAGGAGGTCCACCGGGTCCAGGTCCTCAAGGCGGACCGCCTCAGCCGCCGCAATCCTCGCAGCCGCCACAGTCGGTAACGTCgcagcagcaacaacaacaacagcaacaacaacagcagcaaATACCTCCTTCGCAGTCGCCGCATCACGAATTTTACAGACCGGATCAGCAGTACAtgaatcaaaatcaaataccGTCGCCGGGTGGCGCTTCGTATCCGGGAGCCGGAGTGCCCAACAAAGGCATGCCTCCTCCGTCGGTGCAGCAGTCGCGTCGGCATCCGGATTTCGCGAAAGACTCGCAACAGTCGCCGCCGCCGCCTCAGTCGTACTCGCCGTACAATAATCAACAGCCTAGACCTATGTTTGCTGGCTGGCCCAACGATAGCGCCAATCGTAACCAGTACCCTAGAGGTCCGTATCCGGCAGCGCAAGCGAACGTGCCGCCCAACGCTCCGCCCCAACAGTGGGGCCAAGGTCCGATGACTCGAGCTCCGATACCGCCTAATTCGCAGCCTCCGCCGAATGCTCAATGGGATCAGCATCGATATCCGCCCAATTCGCAACAGCAGCAGTTTCCACCTCCGcagCCTGGCCAATGGAATATGCAGCCGAGTCCTATGGTACAGAGTTCCAATATAAGACCACCCCCAAGAGGGGCGAATTTCCGTGATAAACCTTTTCCACCGATGCAACAAGCTCAAGCG
Protein Sequence
MDRRNDRDLIIKARFRFGGHGNDQQDHDDDDVDDDARNTYWNEMILSDDTKTPCYAFRRGNILFTTIPPARQQPPPVPKSCTATCNINLADRSDKPHGSDFCEVCCGIRSPSFTRRAHSFTTHFCTRVPAKRTPNSVSSSSDQRSKSTDSSLSSSMSSVGHSFGNLLSSRGHISRLSAYLKKNGRPYFDDDDDDDDDGRYEEATTSGDCASETSSSYDTKSKNLKIRPACDKCGLSSSTNGTLANDRRRSSAVTEYSSFSSSYPSSCSSYLPFFLDESCSSSACCDCGLDSTVSSFSNLRTASVDGDRKADQQQHEKARFFSNDSSTDSDNETCSSEMGWSFSSFCQANDSRNLSRATTADSIEKSNPLKTECNKPLGQAVTPFVSSSNRKLVIEKFGDVVRSFRKPGHHVGPSKNADCLCDNCTSFFCRKLELPSNSITAAELKEELQIVQSASPVPVAYTSLQPFRPSNNGRLCANSSVSRCATVTGKLEVRLMGCQDLLEEVPGRSRKEKEILSTPNDLKSFVKGVTGRSSCKSYSVKDEISSELFDIRFKHDSLGKLYEMDDSPDRRVWLDKLLHFMEERNTPISTCPTISKNPLDLFRLYMYVKERGGFVEVCKVTKNKIWKDIAGLLGIGASSSAAYTLRKHYTKNLLPFECHFDRGGIDPQPIINQVESSTKKKNAKNASVPSPGTGSSNSQDSFPSGPGAGMDGYGGYGGYGNEYANQRGPPQMQSSQGMTSQPGAYQSQPGYNQYPPADQYGQQYMGSGSYPPSRPMYPVYPPDGDRGYNQSGNSNAMGGPGTPGGPPQPQSAPSPAVSSGPGPAGSDPYSRSPYGQPMYHAAGRPPFTAGGPGVVPGPGGQTPNSHVVPSPPRPDSQPSPSPYPPSPQQPGAPPQQSGGPPGQPHMGQQQGGPPGPGPQGGPPQPPQSSQPPQSVTSQQQQQQQQQQQQQIPPSQSPHHEFYRPDQQYMNQNQIPSPGGASYPGAGVPNKGMPPPSVQQSRRHPDFAKDSQQSPPPPQSYSPYNNQQPRPMFAGWPNDSANRNQYPRGPYPAAQANVPPNAPPQQWGQGPMTRAPIPPNSQPPPNAQWDQHRYPPNSQQQQFPPPQPGQWNMQPSPMVQSSNIRPPPRGANFRDKPFPPMQQAQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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