Fvir016555.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- Atf3
- Assembly
- GCA_900060175.1
- Location
- FIZR01027792.1:157779-163399[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.8 5.8e+03 -2.5 0.3 6 8 103 105 88 112 0.49 2 3 5.1e-19 3.8e-16 59.0 14.2 2 63 167 228 166 230 0.94 3 3 1.5 1.1e+03 -0.1 0.0 10 17 351 358 346 359 0.85
Sequence Information
- Coding Sequence
- ATGTATAATCTAAACGATATGAGCTGTGGTCCAGGTCCCGAATACGGCAAGCTATCGGTATCGCAGGCAGATAATACGACGACTCCGAAGACTCCGGAAATTATTAATTCCATAATAGCCATAACAAATCCATTCGAATATGTTAGGAGAGGTAGCGGTACGGCAGAAGATAAAATATTATCGCCTTCCGAGTACGCATCGGCTGATACTTGTAGCAGTACCAGCAGTAATATTGATTCACCTACGTCCCCGCCTAGAGTACAAAGCATGTGTTCCCAATTAATCAAAGAAGAATTGAAACTAACATTACAAAAGAAAAGACAGAATAATTTGTCTTCCAGCGAAAATGATTCGAACGCCAGTACCCCTGTAAATTCTATCGGCGCGATAGccgataaattttctcatcgaAATGACGAAAGTAGCTTTGATGACGAAGATGATTGCAGTATGAATGGGGATTTGAATGGCAGTTTTTGTGGTttaaCTCCGGAAGACGAAgaaagacgaagacgaagacgagaaagaaataaaattgcagCAACAAAATGTCgtcagaaaaaaagagaaaaaactaaTCATCTAGTCCACgAATCGGAAGAATTAGAAgaccaaaatcaaaaactcagATCACAAATACAAGAACTGGAGGTTCAGAAAAGAAGCCTGATGGGCATGCTGACGTATCATAAACCAACTTGTATGAAGCCGTCGCCGGAACAATCACCAATTGTTGATTATCAACAACCTCCGTCGTTCTCCAATTCCAATAATAATTACCAGTCACCCACAGACTTCGTAAAGaacgataataaattaaatgatcAAAGATCTGCGTTAATTTGTCAGGAAAACACGATGATTCCTGATTTACATCATTTAGATACCTTTGATTTTCAAGatgattttcttaaaaatcctGCGATTATGTTAAGTACCGCTGATAATCAATATAATGACCAATCTCcgcttaaaaataaatataataataataattataaaactgATAAAAGTCTTCCAATAAGGCATGGCATGTCTTTGaatacaaattataaaaatcatatcGCAGCTCAACTAccgaattataattttttaggcGAACCAATGAGTCAAGATCATTTTGACAGTATTCATTTTAACATTGTTGAAAACCCTGGAAACGGATGTATTGTTTGA
- Protein Sequence
- MYNLNDMSCGPGPEYGKLSVSQADNTTTPKTPEIINSIIAITNPFEYVRRGSGTAEDKILSPSEYASADTCSSTSSNIDSPTSPPRVQSMCSQLIKEELKLTLQKKRQNNLSSSENDSNASTPVNSIGAIADKFSHRNDESSFDDEDDCSMNGDLNGSFCGLTPEDEERRRRRRERNKIAATKCRQKKREKTNHLVHESEELEDQNQKLRSQIQELEVQKRSLMGMLTYHKPTCMKPSPEQSPIVDYQQPPSFSNSNNNYQSPTDFVKNDNKLNDQRSALICQENTMIPDLHHLDTFDFQDDFLKNPAIMLSTADNQYNDQSPLKNKYNNNNYKTDKSLPIRHGMSLNTNYKNHIAAQLPNYNFLGEPMSQDHFDSIHFNIVENPGNGCIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150093;
- 90% Identity
- -
- 80% Identity
- -