Basic Information

Insect: Ferdinandea cuprea
Gene Symbol: -
Assembly: GCA_963576555.1
Location: OY754959.1:103719836-103725776[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0032 0.48 11.8 1.8 1 23 55 77 55 77 0.97

2 28 2.7e-06 0.0004 21.5 1.3 1 23 84 106 84 106 0.98

3 28 0.00046 0.07 14.5 1.5 1 23 227 250 227 250 0.94

4 28 0.027 4.1 8.9 2.8 1 21 257 277 257 278 0.95

5 28 1.2 1.9e+02 3.7 0.8 2 20 288 306 287 308 0.92

6 28 1.3e-05 0.0019 19.4 0.9 2 23 320 341 319 341 0.98

7 28 0.00052 0.078 14.3 1.2 1 23 348 370 348 370 0.96

8 28 4.7 7.2e+02 1.8 0.3 3 23 385 405 384 405 0.94

9 28 0.041 6.2 8.3 0.1 1 23 477 500 477 500 0.96

10 28 4.6 7e+02 1.9 2.0 1 21 509 529 509 530 0.94

11 28 0.87 1.3e+02 4.1 1.5 1 19 539 557 539 559 0.90

12 28 0.0024 0.37 12.2 2.8 2 23 570 591 569 591 0.97

13 28 8.3e-07 0.00013 23.1 1.2 2 23 599 620 598 620 0.97

14 28 0.0075 1.1 10.6 4.5 1 23 760 783 760 783 0.96

15 28 0.0037 0.55 11.6 1.8 1 23 820 843 820 843 0.95

16 28 0.021 3.2 9.2 1.5 1 23 853 875 853 875 0.93

17 28 4.8e-06 0.00073 20.7 1.1 1 23 882 904 882 904 0.98

18 28 0.069 10 7.6 0.9 2 23 928 950 928 950 0.93

19 28 0.00039 0.059 14.7 0.9 1 23 990 1013 990 1013 0.95

20 28 0.14 22 6.6 3.0 1 21 1020 1040 1020 1041 0.96

21 28 0.23 35 6.0 0.6 1 23 1050 1073 1050 1073 0.91

22 28 0.013 1.9 9.9 1.9 1 19 1079 1097 1079 1098 0.95

23 28 0.00042 0.064 14.6 1.7 1 23 1109 1132 1109 1132 0.97

24 28 1.2e-05 0.0019 19.4 0.3 2 23 1151 1172 1150 1172 0.95

25 28 0.0004 0.061 14.6 4.3 1 23 1178 1200 1178 1200 0.99

26 28 1.6e-07 2.4e-05 25.4 3.4 1 23 1206 1228 1206 1228 0.98

27 28 4.7e-07 7.1e-05 23.9 2.4 1 23 1234 1256 1234 1256 0.99

28 28 0.00038 0.058 14.7 0.2 1 23 1262 1286 1262 1286 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0032	0.48	11.8	1.8	1	23	55	77	55	77	0.97
2	28	2.7e-06	0.0004	21.5	1.3	1	23	84	106	84	106	0.98
3	28	0.00046	0.07	14.5	1.5	1	23	227	250	227	250	0.94
4	28	0.027	4.1	8.9	2.8	1	21	257	277	257	278	0.95
5	28	1.2	1.9e+02	3.7	0.8	2	20	288	306	287	308	0.92
6	28	1.3e-05	0.0019	19.4	0.9	2	23	320	341	319	341	0.98
7	28	0.00052	0.078	14.3	1.2	1	23	348	370	348	370	0.96
8	28	4.7	7.2e+02	1.8	0.3	3	23	385	405	384	405	0.94
9	28	0.041	6.2	8.3	0.1	1	23	477	500	477	500	0.96
10	28	4.6	7e+02	1.9	2.0	1	21	509	529	509	530	0.94
11	28	0.87	1.3e+02	4.1	1.5	1	19	539	557	539	559	0.90
12	28	0.0024	0.37	12.2	2.8	2	23	570	591	569	591	0.97
13	28	8.3e-07	0.00013	23.1	1.2	2	23	599	620	598	620	0.97
14	28	0.0075	1.1	10.6	4.5	1	23	760	783	760	783	0.96
15	28	0.0037	0.55	11.6	1.8	1	23	820	843	820	843	0.95
16	28	0.021	3.2	9.2	1.5	1	23	853	875	853	875	0.93
17	28	4.8e-06	0.00073	20.7	1.1	1	23	882	904	882	904	0.98
18	28	0.069	10	7.6	0.9	2	23	928	950	928	950	0.93
19	28	0.00039	0.059	14.7	0.9	1	23	990	1013	990	1013	0.95
20	28	0.14	22	6.6	3.0	1	21	1020	1040	1020	1041	0.96
21	28	0.23	35	6.0	0.6	1	23	1050	1073	1050	1073	0.91
22	28	0.013	1.9	9.9	1.9	1	19	1079	1097	1079	1098	0.95
23	28	0.00042	0.064	14.6	1.7	1	23	1109	1132	1109	1132	0.97
24	28	1.2e-05	0.0019	19.4	0.3	2	23	1151	1172	1150	1172	0.95
25	28	0.0004	0.061	14.6	4.3	1	23	1178	1200	1178	1200	0.99
26	28	1.6e-07	2.4e-05	25.4	3.4	1	23	1206	1228	1206	1228	0.98
27	28	4.7e-07	7.1e-05	23.9	2.4	1	23	1234	1256	1234	1256	0.99
28	28	0.00038	0.058	14.7	0.2	1	23	1262	1286	1262	1286	0.92

Sequence Information

Coding Sequence: ATGCCAAACTTTCTACAAGGATCATCAATTGCAGGTGTGGCAGTGGAATCTCTGAATCCTGAATTCTGTAAAAAACTCAAACAGAAATTAAAAACGCGCAGCCAGCGATCCCGTGTAAACACTCGCAGCCAAGTTAGGGAAACTAAAACTGAATCCGGCCGTTTTGAATGTGATTCTTGTAACAAAACATTTGCGTGGAAAAAGGATTTATTCCGCCATGAAAAGTACCACGATCCGAATAACAGAAAATACCCATGTCCGCACTGTGAACGCAGATTCGTCCGAAAAGACAAGTTAACATCACATTTACTCGTCCATTTGGCGGGCATTCCTAAACGGTCACTAAAGAGTTCGCAAATCTTTGCTAATCATTTGTTTTCGGAGAAAAAATTCAAGGAAATTAAATGTATGATATGTAACTTCGACAAAGCGGCCACCGTTTCTGAGCTGCGTCGTCACATTGTTCTACATAATAACTTGGAACTTATTAAGGATTTGGAAAACTGTGAAGTTGTAAAGACATTCTATCCGGGGAAAAATCTGCAAGAAGTTATTCCCATGATGGCTAGTCAAATCGCCGATAAACAGTTCGGTAAATTTTACTCGGTAGTCAATTCAAATAGCTACGAAATGGGTATCAGTGATTCGGATCAAAGTGATCCGGATTTAGAGCATGCCTACGCTTGTGAATTATGCAACGAGGAATTCAATCGAAAGCACAAGCTGATGACGCATCAAGCCTACGAGCATACTTTAGATGAGTGTCCGTACAAATGTGATTCGTGTCATCTTAAATTCACCAGCCAACATGTTCTGCAAGGTCATCTGAAGTATCAATGTAAGAATCCGGAAAAGTCGCTCCAATGCGAAAAATGTCCGGGTCGATTCGCCTGgcaaaaaaacttcgaaaaTCACAGGTGTGGCGACAAGAAAAGCGCCGTCGTAAAAGAGTCTACTAAGTGCGAAATTTGTGAAAAGGTCTTTATTTATCCGCGGGATTTGAGAACTCATAAAAAGACCCACATTCCCGATGGCAAAGCGCATAATTGTTCCGTGTGCGGTGAAAAGTTCCTGCGTCTTGAGAATTTGCGTCGTCACTTGCAGGCGCATTCAAAGAAGGCGATTGCTGTCTTGCGGCCAAAGAAAATTCTCTGTATGCTTTGTAGTAGTGAATTCGAAAGTATTCCAAAATTGAAACAACATCTCTACTCGCATTCTGATGGCCTAACGGAGGTCAACTTTGAAACATCCGGATTCGTTAGTTATTTCTATCCCGAAGTGGATAAGGACACGGTTTCTGAGTTCATTCGAAATTGTTTCAACGAGCAGAAACTTGGACAATTATATATGGCGGTGAACAAGTACGGTCTCGAGATGGTCTTGAGTGACTCGGACACGGATGATGAAAACAAGCCTGAGGAGAGCTCTTATGTGTGTGAGAGATGCGATGTGAAGTTTCCTCGTATACAAGAAATTCTCCAGCATCAGCTCGTTGAGCATAGCACCCATAAGAAATCAAGTCCTCATAAATGCGAAAATTGCGAAGATCACTTTGTGTGCGCGGCACTCTTAAATCGCCACATAAAGAACGAATGCTTGAATTCGGACAAAATTCACAAATGCAAAAGGTGTGGCGTTAAATTCATGTGGAAGCAGAATTTGGTTGCCCACGCCTGTCCGCGTGGTGAAAACTATGAAAACGATAAAACATGCGAGATATGCGGCAAAAAGTTCATTTGGCTTAAGGACCTGCATCGACACAAACGAAGTCATATTCCGGAAGAGATGAAATTGCAGTGTCAAGTTTGTGACCGAAAATTTAATCGTAAAGACAACATGCGAGCGCACATGAAAGTCCACACCAATGACTACAAACAGCAAAAACTGAGGGCGCTGGTGAAGTGGGAACAGCCAGACGAGAACATGTGCAGGCCACATGGTATCAAAGACATTCAATGCAAGATCTGCCTATCAAAACACAACTCCATTCGAGATTTAACAACCCACTTGCTTGGGCATATGGACATGGAGACACTCAAGCATCGAGAAGCAGAGATTGATGACATTGCTATGCTGCTATATAATAGGCATATGGATCTTCAAACGCTTTCAGATGAAATAAGCAACGACCTTTCGAATGGCAAGAACGCGCGCTTCTATTCGATTATTAATGAGGCTGGCTACGAGTTGAGCCTAAATGATTCAGAGACCTGCTCCGATTTGGAAGCACAGGcctacgatgatgatgacgatgatgaagacAGTATTTCCAAAGGCTACAGTTGTAAattatgcaacaaaaaattcaataggAAGTTCAAAATCTTTTACCACCAAATGAACGATCACGTTTGGGATGAGCTGCCGTTCGAGTGTGTATCGTGTGGGTCGAAATTCGTATGTGAGCGGCTTTACAGTCATCATCAGAAAAGTGAATGCGAAAACCCTGAAAAGCAATATAAATGCAAACAATGTCCGATAAGGTTCGTTTGGAAAGAGAACTTGAAGAATCATGAAAAGCATGCGCACGAAAAGAACGCACCACAGGCAAAGAAGTATCCCTGCACTATCTGCGATAAAAGTTTTCTTTGGCATCGAGACCTCCAGCGACACAGTAAAATTCATAAgatcaaagaaacaaaattcgAGTGCACATGGTGCTTTAGGATATTCATGCGAAAGGATAATCTTAAGgttcACATGAAAGTTCATCAAAATGCGACACATCTACTGCTCCCAGACATTTACTATCTAGCGCGACCAAATGGTTCAAAAACTGCCGAATGTAAGCTTTGCAGTGAAAAGTATTCTACCATTCACGAGTTGTTTGATCACGCTCAGAACGTACATTTCTATCAAATGCGTGTTACCATTCCCAATCCCACCACCTACTCGATCACAAACGCATTGGGCTACGAAATGGACATCGATGACTCAGAAACCGAGAAAGAAGATACCGAGGAAAAGTACTTGTGTGAAATTTGCGATGCTCGATTTAATCGCCGTTTTAAACTGCTGCAACATCAGCAATCACTTCACTACTCCGATAATATACCTCACAAATGTGAGATTTGTCACTTCAAATGCGTCTCGAAAGTGGTGCTTAGCTATCATATGCGAGCACAGTGTCTGAACTCTTTGAAACAATTCCGCTGCAGCAGATGCACAATGCGATTTATGTGGAAGGAAAATTTAGAAAACCATGAAAGCCTTATTCATGACAGTGCTCGAACGCACAACTGTAATGTCTGCAAGAGAGACTTTGCCACGCTGCACGACCTAAGAAATCACAGTGATTGCAAGCCACCCGTCGATGTAAAATACTTCGAATGTGATTTGTGCAGCCGGAAGTACAACCGCAAAGATCGACTTTTGAAGCATGTGAGGATTTTTCACAACGGAACGGGTGCACCGCGCGTCAAAAGTGCACCATCTACGGATAAGAAATTTCTCTGTGCTTTTTGTGGCAAAGAAGTTTCAAGTTCTTCGAATTTGGTTATACACATGCGTCGGCATACGGGAGAAAAGCCGTTCAAGTGTGAGTTCTGTAACAAGGGCTTTCCGCGCTCTTCGGATTTGAGTTGTCACCGACGAACTCATACAGGAGAACGACCCCACAAGTGCACCGTGTGCGACAAGGCGTTCTCGCGTTCATACAAACTGCAAACTCACATGCGGATACACTCTGGCGAACGGCCCTACAAGTGTACATACTGCGAGAAGAGCTTCACTCAGTCCAATGATTTGACATTGCATGTGCGACGGCATACCGGGGAAAGGCCGTACATATGTGAGACTTGCGGGGAGAGGTTTATACAGGGAACTGCCCTTCGGAATCACCGAAGAATGCGTGGGCACTATGAATTGTAA
Protein Sequence: MPNFLQGSSIAGVAVESLNPEFCKKLKQKLKTRSQRSRVNTRSQVRETKTESGRFECDSCNKTFAWKKDLFRHEKYHDPNNRKYPCPHCERRFVRKDKLTSHLLVHLAGIPKRSLKSSQIFANHLFSEKKFKEIKCMICNFDKAATVSELRRHIVLHNNLELIKDLENCEVVKTFYPGKNLQEVIPMMASQIADKQFGKFYSVVNSNSYEMGISDSDQSDPDLEHAYACELCNEEFNRKHKLMTHQAYEHTLDECPYKCDSCHLKFTSQHVLQGHLKYQCKNPEKSLQCEKCPGRFAWQKNFENHRCGDKKSAVVKESTKCEICEKVFIYPRDLRTHKKTHIPDGKAHNCSVCGEKFLRLENLRRHLQAHSKKAIAVLRPKKILCMLCSSEFESIPKLKQHLYSHSDGLTEVNFETSGFVSYFYPEVDKDTVSEFIRNCFNEQKLGQLYMAVNKYGLEMVLSDSDTDDENKPEESSYVCERCDVKFPRIQEILQHQLVEHSTHKKSSPHKCENCEDHFVCAALLNRHIKNECLNSDKIHKCKRCGVKFMWKQNLVAHACPRGENYENDKTCEICGKKFIWLKDLHRHKRSHIPEEMKLQCQVCDRKFNRKDNMRAHMKVHTNDYKQQKLRALVKWEQPDENMCRPHGIKDIQCKICLSKHNSIRDLTTHLLGHMDMETLKHREAEIDDIAMLLYNRHMDLQTLSDEISNDLSNGKNARFYSIINEAGYELSLNDSETCSDLEAQAYDDDDDDEDSISKGYSCKLCNKKFNRKFKIFYHQMNDHVWDELPFECVSCGSKFVCERLYSHHQKSECENPEKQYKCKQCPIRFVWKENLKNHEKHAHEKNAPQAKKYPCTICDKSFLWHRDLQRHSKIHKIKETKFECTWCFRIFMRKDNLKVHMKVHQNATHLLLPDIYYLARPNGSKTAECKLCSEKYSTIHELFDHAQNVHFYQMRVTIPNPTTYSITNALGYEMDIDDSETEKEDTEEKYLCEICDARFNRRFKLLQHQQSLHYSDNIPHKCEICHFKCVSKVVLSYHMRAQCLNSLKQFRCSRCTMRFMWKENLENHESLIHDSARTHNCNVCKRDFATLHDLRNHSDCKPPVDVKYFECDLCSRKYNRKDRLLKHVRIFHNGTGAPRVKSAPSTDKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLSCHRRTHTGERPHKCTVCDKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYICETCGERFIQGTALRNHRRMRGHYEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -