Basic Information

Gene Symbol
ZFX
Assembly
GCA_963576555.1
Location
OY754961.1:70659447-70670041[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.051 7.7 8.0 0.1 2 23 591 613 590 613 0.94
2 20 0.0003 0.046 15.0 0.6 1 23 619 641 619 641 0.98
3 20 5.6e-05 0.0085 17.3 1.0 2 23 650 671 649 671 0.97
4 20 0.0049 0.74 11.2 0.8 1 23 677 700 677 700 0.97
5 20 0.0006 0.09 14.1 1.2 1 19 732 750 732 752 0.97
6 20 2.3e-06 0.00035 21.7 0.5 1 23 760 782 760 782 0.98
7 20 1.1e-06 0.00016 22.8 1.3 1 23 788 811 788 811 0.98
8 20 0.0027 0.41 12.0 1.1 1 23 821 844 821 844 0.95
9 20 7.1e-06 0.0011 20.2 0.8 3 23 937 957 935 957 0.97
10 20 1.3e-07 1.9e-05 25.7 0.6 1 23 963 985 963 985 0.99
11 20 0.00015 0.023 16.0 0.2 1 23 996 1020 996 1020 0.96
12 20 0.0039 0.6 11.5 2.3 1 20 1026 1045 1026 1047 0.93
13 20 2 3.1e+02 3.0 5.5 1 23 1084 1106 1084 1106 0.97
14 20 0.00013 0.02 16.2 2.6 1 23 1112 1134 1112 1134 0.98
15 20 0.002 0.3 12.5 2.4 1 23 1140 1162 1140 1162 0.96
16 20 0.0078 1.2 10.6 4.0 1 23 1168 1190 1168 1190 0.97
17 20 4e-05 0.0061 17.8 2.1 1 23 1290 1312 1290 1312 0.95
18 20 0.00033 0.05 14.9 0.7 1 23 1318 1340 1318 1340 0.97
19 20 8.7e-05 0.013 16.7 0.5 1 23 1347 1369 1347 1369 0.97
20 20 0.036 5.4 8.5 7.6 1 23 1375 1397 1375 1398 0.94

Sequence Information

Coding Sequence
ATGGACATTAAGCCCGGAAAATCTCATAGAGagctattaatatctgactccGATAGCGATGGTGACTACAGAGGTTTCCTCGATGCTATGAACTCTCCTCGGAGAATAAGAAATGAATGTACTATGACGGAAACATCACAGACGTCACGAAACACTAAAAGCATTTGCAGCGGAACCTATGATGAAGCTAAAATGAAACACTCATCAAGCATCAAAGAGCTCTCACAAAAACACTTCGAACATGAAGATCAGAGTTTTGAGACGGAGAAAAATGACTTCAACCCTGTACGATTGATTAAAACTTCAACAACAAAAAGTGCATCCCTGGAGTGGTCCCTACTTTTCGTCAAGCTAAATTCGGAATTAAAACACAAACTGTCCGAAGACCCAACTCCTGTGAAGAAATCTTCGTGGCACACAGTCTTCAGCCATATTGAACCGAATTCAAGTTGTCAAAGTTCTCTAAACGACTTGTTTCGAGAAGAGCACCAGCAGAACTCAGATATAGAAGACGAGTTTTTCTCACCTGTGTCTGTGCCTTTAACCGATTTTTGTCATGATAAGTCATCATCATTCTGGATATCAGTTAGTGACTTCACCATTTGCATGCCCATATCTAAGCACCCAGCAGACCGTTTAAGCCTGCTTCACGACATCTTCACGCAGAAGAGCGCTGAGTGTCGAGAGGTGCACTTTGGAATAGATGACTTCAAGTACTCACACAAGGATGGCATTCAAAAAATAGATATAACCAAGAGGTTTCCAAAAATCGACGGGATTTCCCATTACTGGATAGCCACAGGCGACTTGGCAGTTCCATTTCAGGGCAACTTCATGACGCCAGAAAAGATCAAGAGGACATTTGACTTTATCCGCGATTCTATCTCTGGTGACAGCAAACTGTCCTTCGGCGTAGATGATCTTGAATTCTCCAcattgggcgatatattgaataCAAAATTCTCCATCGAAAGCAGTTACAGTATGCAAATTGATTTGAACTACGAAAGGCCAAGAAACACTTCAAActtaaaaccattgcaaacGAGTAATTTTGATTTGGATTTGTCCACCGAATTTGGACGTCTTTCTTTCGGTCCCTATGGAAACGACTACTTTGACATGATGTCGATGTGCAGCAGTAACCAAGCCTCAGATGCATCCTTTGAATTTCTTGAAAGTCCAGATATGTTTAGTCGAGAGTACGAAAACGAACCACCAAGTGATTTTAGGACTATGAGTGCGGAGCTTTTCAGCGACATGAACTCAGCGGATGATCGGTTtccaaacaagcaaacatctgttGAATCTTCCGAATCCCTAGCAAACACCGAAATGTTCAAGCTTCGCTATGAAAATGAATTTCTTAACAAGACCTTTAACACAAAGCTCAAAGATGTTAAATGTTCTGAGAAGGCCTCAAATGAATATCGGCCCCTGGAGATGAAACCGCCACTATCGGATGATGTGAATGCTGAGAGAAACCTATTCACACCGCTTCCAATGGATATATCTACCCCAAATGCACTGCTCTATCAACTTAATGATTCAGATGAGAAGTTCATAAAATCCAGCGAGTTTTATGCCTTCGAAATGGACAGCTTTACTGTGCCCGAAATCGACGCAATATCTGGACTAAGTCCGATCGTAGAGGAGCCAAGTTGCTCCTTGCGCGTTGCACCACTCGAATCACTTTTCTCTCCAGTTGAACCAGCAACGTTggataaaaaattttcaattcctGAAACGACGGAACCAGTGAAGCAGCTATCGTGTGATCTGTGCGCCGAAACCTTTTCCTCGGCACAAGTTTTGCGTCTACATAGAAGTGTGCAACACATTTCAACTAAGGAATTCCGATGCCGAAAGTGCCCATtgtcttttaattttgaatcgAATTTAGTCCTTCACTTGGCGTCGCATGTTTCCAGCTGCAGCACGAAAACTGAGTGTCCCGAATGTAACACATCTTTCAAGCGCATTTCCAGCTTCAAGGGTCACTTAAAGTCGCATCAAACCAGCGATCGATTTAAATGCAATCGATGCGAGAAGGAATTTGAGCTAAAGGGCTACTACGATAAACATTTGGCAACGGCACACAAACCCGGCACAGATGGGACTGTTGAGGAGATTCTAGCAACAGTTGCCACAAATGCCAGAAGTCGGATAAAGTCGAAAAAAACTGAGGGAAAATATAGTTGCTCGACATGTGGAAAGAACTTTCCAAAGCCTTGTCTATTGAAACGACATGAAGTTTGTCATTCGGGCGCGAAGCCATTTAAATGCACAGAATGCGATCAGGGATTTACCCAAAAACCATCATTGGTGAGGCACATGCTGTTGCATAGTGGCGTTAAGGACTTTAAGTGTCCCAAATGCAGCTTGagcttttcgcAGAAAAACAATCTCATTGTGCACATAAAGCGCACGCATCCCATACACCTGAACTTGGACAATATGTTTCCTTGCGATTACTGTCCGTGTGTATTCACCAAACTGAATAGTGTCAATCGCCACAAGGCTATGGTGCATCCGGAGAGGGAGAATGCTGCCGACAACGATGGCTttaacgatgatgatgatgataatgtgAACGTTGCCAAGGTATTAGAGCAACTAAAGAGCTTGCAGGAATCGATGAATATTTTGGACATGAAGCCACCGGCGTTGGAGCTGTCATTATTGAAGCCACCATCGCCTGGACCGACAGTTCGAACTGTGACGCTGGTCGACACGTCAAACCCGACAAAGGAAAAGACCTACAAAACGGTAAAAGAAATTTTGTATAAGGGACAACGACTGATGGCGTGCGTTTACTGTGACAAGACTTTCCAGCGAAAATTTGATCTGTTGAGACACCTTCGCATTCACACCAAGGAGAAGCCTTTCCAATGTAAAATATGTGATAAGACCTTTGCTACAAGTGGTACTCTTAAAGTGCATCAAGCTACTCATATTTCTTCACAAGACAAGCCAGCAAAAGTATATGCCTGCACAGCTGATGAATGCGGTAAGCGTTTCTCCTCCATGCGTCAACTAGACATCCACACAAGAATTCATTCAACTTCCATATCGTACATTTGTCCTTTGTGCTCAAAAACCTTCACATCGAAAGCCGGTTTCTCTTCACACAAACACCACCCTCAGGATAAAGGATTTAACTCGGTTCGTCCACTTTTAATGTCGCCAGTTAAAGTTGGAACAAATACCTCTGAAGCAGATAAAGTTGTCGAGTACAGCAACAGAAGCCACCAGTGCTGCGTCTGTGGATTGAAAATGCAAAAGTTGTCACATTTGCGGCAGCACGAAGCCACTCACAAAGGAGAGAAGCCTTTTAAGTGTTATATATGTTTTAGATCATATACAACGCAAAGTTCACTGAATCTCCACTCCAAGATCCACGCCAATGAAAAGCCGCATATTTGCGAAATCTGCAATTCAAAGTTCTTAACGAGGTCTCTCCTTAAGCGACACATGCTCTCTCACAGTGACGAACGCAAGTTTGCTTGTCCATATTGTTACCAACATTTCAAAACAAGCGACAATTGCAAAGAACACATTTTGATACATGGTCGCAGTTTATTAGCAACTCCGAAAGAGCACGTAGAAGACGCCATCATACTCACGTCACCTAAACAAGAAGTGTCTTCTACTCCTACTCCTTGTGAAACTATCTCTCAACCATTTATCGCAGTTGTCCAAAGCCCACAGAAGCATTTGTCGCCGAAGTTCATTCAACTGGAAATGGTCAAGAACTGTAAGAAGCATACTCACAagaaccttaccattgaaaccgtATCCAGTTCACCCAAGAAATCGTCGAAGAAATCCCTAGCTCGTTCCTTAAAGCAAATCAGTCATCCTGGTCATACGTGTATTGAGTGCGGTAAAAACTTCTACAAAGCAAGTGATTTAGAACGTCATACACGAACGCACACGAAAGAAAAACCATTCGACTGCAGTTTATGCTCTAAACAATTTGCTTTGATGTCCACTTTGGCTCAACACATGAAGACTCACGACACGCTGCGACAGACTTTTGATTGCCAAGTATGTGGCAAGAAGTACACGTCAAAAAAGGTGCTAGTTGTACACTTAAGATTACATACGGGCGAGCGACCATTTCAGTGTGATGTGTGCAAGAAGACTTTTCGAACATCTGGTCATAGGATATGTCACATGAAGGCACATCATAAAAAGAGGAAATGA
Protein Sequence
MDIKPGKSHRELLISDSDSDGDYRGFLDAMNSPRRIRNECTMTETSQTSRNTKSICSGTYDEAKMKHSSSIKELSQKHFEHEDQSFETEKNDFNPVRLIKTSTTKSASLEWSLLFVKLNSELKHKLSEDPTPVKKSSWHTVFSHIEPNSSCQSSLNDLFREEHQQNSDIEDEFFSPVSVPLTDFCHDKSSSFWISVSDFTICMPISKHPADRLSLLHDIFTQKSAECREVHFGIDDFKYSHKDGIQKIDITKRFPKIDGISHYWIATGDLAVPFQGNFMTPEKIKRTFDFIRDSISGDSKLSFGVDDLEFSTLGDILNTKFSIESSYSMQIDLNYERPRNTSNLKPLQTSNFDLDLSTEFGRLSFGPYGNDYFDMMSMCSSNQASDASFEFLESPDMFSREYENEPPSDFRTMSAELFSDMNSADDRFPNKQTSVESSESLANTEMFKLRYENEFLNKTFNTKLKDVKCSEKASNEYRPLEMKPPLSDDVNAERNLFTPLPMDISTPNALLYQLNDSDEKFIKSSEFYAFEMDSFTVPEIDAISGLSPIVEEPSCSLRVAPLESLFSPVEPATLDKKFSIPETTEPVKQLSCDLCAETFSSAQVLRLHRSVQHISTKEFRCRKCPLSFNFESNLVLHLASHVSSCSTKTECPECNTSFKRISSFKGHLKSHQTSDRFKCNRCEKEFELKGYYDKHLATAHKPGTDGTVEEILATVATNARSRIKSKKTEGKYSCSTCGKNFPKPCLLKRHEVCHSGAKPFKCTECDQGFTQKPSLVRHMLLHSGVKDFKCPKCSLSFSQKNNLIVHIKRTHPIHLNLDNMFPCDYCPCVFTKLNSVNRHKAMVHPERENAADNDGFNDDDDDNVNVAKVLEQLKSLQESMNILDMKPPALELSLLKPPSPGPTVRTVTLVDTSNPTKEKTYKTVKEILYKGQRLMACVYCDKTFQRKFDLLRHLRIHTKEKPFQCKICDKTFATSGTLKVHQATHISSQDKPAKVYACTADECGKRFSSMRQLDIHTRIHSTSISYICPLCSKTFTSKAGFSSHKHHPQDKGFNSVRPLLMSPVKVGTNTSEADKVVEYSNRSHQCCVCGLKMQKLSHLRQHEATHKGEKPFKCYICFRSYTTQSSLNLHSKIHANEKPHICEICNSKFLTRSLLKRHMLSHSDERKFACPYCYQHFKTSDNCKEHILIHGRSLLATPKEHVEDAIILTSPKQEVSSTPTPCETISQPFIAVVQSPQKHLSPKFIQLEMVKNCKKHTHKNLTIETVSSSPKKSSKKSLARSLKQISHPGHTCIECGKNFYKASDLERHTRTHTKEKPFDCSLCSKQFALMSTLAQHMKTHDTLRQTFDCQVCGKKYTSKKVLVVHLRLHTGERPFQCDVCKKTFRTSGHRICHMKAHHKKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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