Fcup011918.1
Basic Information
- Insect
- Ferdinandea cuprea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963576555.1
- Location
- OY754959.1:61075587-61104139[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-14 5.5e-11 42.8 0.1 1 44 334 378 334 379 0.92 2 2 4.6e-18 3.2e-15 56.4 0.0 1 43 819 862 819 864 0.95
Sequence Information
- Coding Sequence
- ATGGACCACCTGGCGAACGctaGCTTAGAACGGGTTGCTGAGGAGTTGTTGGGACGCAGGAAATGGAAGCAATATCAAGAAGCGCGATCCCAATTAAGTGCAGATATCACAAATCTAGATCAAATCGATTTTTCAAGTCAGAAACTCGAACCCGAACAAAAACTGGAGAAGGCAAAGGAAAATTcacatcagcagcagcaaccgTTCGAAAGCGACGTTCCAACAATCAAAAGCGAAGTATTCGACTTGAACGAAAGAACTGTAACTTCGCCGCATATAAAAAAAGAAAACTTCGAAAGCAATTTAGTTGTACCGGGGGAAAGCATAAAACTTAATAACAATTCAACTACATCACATAGCAttcattataataataatagtagtaaaaagGATAACGAGGAGCTAGAACCACCCACCAGCAGTCCAACACCACCACCAATACCCATCGATTGGACACCGAATGAAAAGTGTAATTTTTGTGTTGACGGTAAACTCCTCACAGTGAACGAGAAGGGTGAATTAGTGGCTGAGTCGAGCCCGGCTTTGTCCGAGGCAGACCTCGCCAATagacAAGCAGGAGATACGGACAGTGATTCTAGCGATAGTCTGGTACCGGATGCTAGGGTCAATGCGAGTAAAGTTGTAACATCACGCATAAGGGATTCAGTTCCACCGAATATGACCTCATTAGAGTCGATGGCAGCACAATGGACGGCTCTTCAATCAATACCGGGACTACAGTCAGGCTTAGGGCAATTGTATCCAAgcATATTGTACAATTTAACTCAGCACGTGAACTCGGCCACACCAACTACCTCAGAGACATCGGCCGCTGCTATAAGTCCCTCTCTCAAGGATTCTCCCAGTCCCAGTGATTTAACGGGTGAACAGCCATTAGATCTTAGTTCAAAACCATCACCAAATTCCTCAATCGGTGGAGATGCCCGACACGTGCgAGCGAAACCACGTGTGACACCATGTACTGGCCGTCGCACTTACACCGAGGAAGAACTAAACAGCGCACTGCAAGACATTATGAGTGGCCGGCTGGGTACACGCCGTGCAGCCGTTCAATATAACATTCCGCGTTCCACGTTGCGTAACAAGGTTTATAAAATCTCATCGGGAGCAAAGCGTGAACCATCCACATCGTTGCCCCATCTAACCAGCCTTGAGGATTTGGCCGATGCAGATGACGATAAACAAGATCTTTCGGCCGACGAGGAAGATAGTAGTGGTGAAAAGCTTATGAGCAGTTCCTTAGCGTCTCATGGAGGCGATGATCTTGCCAGTCGATTTGCAGATGCAACACTTGCAGCGAATATTCAAACAATTTGCGGCGAACAAAACCTAACGcctcagcaacagcagcaacaccaGCCGACATCATCCTTAGACTCACAGCCGAAACGCAAAGCTGCAACACCACAACCGCCACCGCCACAAACATCACCGATCGCACAGAATCCGTGGCAAAATGTTCTGCTGCAAAGTTTGCTATTAGCTGGATCACCGATGCAAGCAAACTTTGAAGATGCTTTACAATTGTTCAATGCCTTGTTGTTAAAACAAGATCCGAGTTTGATCAATCAGCAATTGCTTATGCAACAACCATCGCCACTGTCAGCACAGCCGCATCAGCAACAGCATCATTTGCATCCGAATGTGTCCGGGAATCCGTCGACAGCTGCAGCTGTGGCGGCTGCGTCCTTTCAAAATCGTCAACCAAAGTCTGAAACACCGGAAACTGCATCTTCAGTGGACCTGAACGAGGCGCAGGGTGATGATCCATCAGTTATTCTAAAAATTCCGTCCTACAAACCGGTAGCTGGATCCTCAACTTCATCAGCATCCTCCGCAAtggttgctgctgctgcagcagcGGCGGCTGTGCTATCTAACAACAAGAATGGTGACAATCTACCATCGAGTTCGCCAAAAATGCCCTCAAGTTCATCTCTGTTGGCTGGGAGTACCTCAACGCAACAGCTGCATCACCACCATCACCCCCACCTGCATCCGCATCACAATTCGTCGGCATCGTCTGTCAATAATATTCTGGGAATATCACCGCCGTTGCTGCGTCACACCAGTGGTGAGTCTCAATCGCCGCCAACTTTATCACTGCAAGACGTCATGGCAAACAGTATAAGCCGCTCCTTTAGTCAGCAAGCGAACAAAGACAACACCAGTCCAAGTCCTGCTCACTCAGCATCGTCGGCAATGGATCACAATGATCAGTACAAACGGCCCAGCATTTCGGTAATAAAGAATATTGGCGGAACGGATACCTCACGCTTTGCTACCGCTCCAAATCTGCTGGGCGGTCATCACAACTCTAAtcaccaccaccagcagcaaTACCATCATCAGCATCACAGTCAGAATGCGGCGAACAACAATTTGGCTGGCGGCAAGGGTACACGACCAAAGCGAGGCAAATATCGCAACTACGACCGTGATAGCCTGGTTGAAGCAGTGAAAGCGGTGCAACGAGGTGAAATGTCAGTGCACCGTGCCGGCAGTTACTACGGCGTACCTCACTCGACACTCGAGTACAAGGTAAAAGAGCGCCACTTAATGCGGCCTCGAAAACGCGAACCCAAACCACAACCACCTCTTGATGACCGGACAGCAGGCAGCACTTCAGGTGGCAATACTTCGAGCTCCTCGGCAAACAACTCAAAAAACTCAAACATTCCAGGTCTATCGGCTGTAAATAGTTTAGATAAAATGAGTAAGAGCAGCGGCGCTGCGGGCCCTAGTGTCAGCCAAAAACAGTCGGCCGCTGGTAAGAGCAACCCACCATTCCCTAACACATCACCAAATGGCATGAAAATACCCCCAGCATTATTTGAGCCAAGCTTAGCCGCACAGCTGCAGTATTCGCCGCACCTTTTCTGGCACAGTGGCTTCTCGCCGCTTCAAATGGACTTTAGTAACAGGTCACAAGCAGCGGCGGCTGTTGCAGCGGCAGCTGCTGCCGGCGGCGGACCTGGAAATCCATCGTTTGCTGCTAACGCTGAATTCTTAAAGTCGCAAATGATGCAGAGATTCCACGAGGAGCGAGGACCTCCTAACTCGATTGGCAGTCCCCCCGCAGCAGCAGCTATCAGCAATTCcaccagcagcagtagcagcagcaccAACAACACCAAAAGTGTCCGCGACATCGTTGAGAACCTCTACGATCCAAGTAGTGCGAACGGTTCCTTTTTAGACGGTATCATACGCAAAAGCCTAGATCGTAAGAACTCCGAACACGGCGCCTTATTAGACCAACTGGTCAAGAACAGTAAACCACCTCCACCACGTCTTATGATGAATAATGACCGCACACCAGGTGATTTACTAAAGTTGAAGCGTTCTGGTAGTCCAATGCCGTATCATACTGCGATGGATATCAAACGGGAGCGTGCCAGTCCATCGTCAGATTCATCGAACAGCGATTCGGAGCAAAATCATCGGCGGGACACTGATTCAGAACCACTACCACCATCACAACACCATGCGGTTGGGCTGCATCACGCCATGTTGGCCGCCAACAGTGACTTAAATGGCGCCCAACATGGGCTTACATCCGAAAATAATCTACCAACGTCATCGGCGGTGTCATCGTCGTTATCCGCAGTAACCACCAGTATTCTGCAAGACAAATTGGGGCAAATCAAGTCGGAAGCAGAGGATAGTTTATAG
- Protein Sequence
- MDHLANASLERVAEELLGRRKWKQYQEARSQLSADITNLDQIDFSSQKLEPEQKLEKAKENSHQQQQPFESDVPTIKSEVFDLNERTVTSPHIKKENFESNLVVPGESIKLNNNSTTSHSIHYNNNSSKKDNEELEPPTSSPTPPPIPIDWTPNEKCNFCVDGKLLTVNEKGELVAESSPALSEADLANRQAGDTDSDSSDSLVPDARVNASKVVTSRIRDSVPPNMTSLESMAAQWTALQSIPGLQSGLGQLYPSILYNLTQHVNSATPTTSETSAAAISPSLKDSPSPSDLTGEQPLDLSSKPSPNSSIGGDARHVRAKPRVTPCTGRRTYTEEELNSALQDIMSGRLGTRRAAVQYNIPRSTLRNKVYKISSGAKREPSTSLPHLTSLEDLADADDDKQDLSADEEDSSGEKLMSSSLASHGGDDLASRFADATLAANIQTICGEQNLTPQQQQQHQPTSSLDSQPKRKAATPQPPPPQTSPIAQNPWQNVLLQSLLLAGSPMQANFEDALQLFNALLLKQDPSLINQQLLMQQPSPLSAQPHQQQHHLHPNVSGNPSTAAAVAAASFQNRQPKSETPETASSVDLNEAQGDDPSVILKIPSYKPVAGSSTSSASSAMVAAAAAAAAVLSNNKNGDNLPSSSPKMPSSSSLLAGSTSTQQLHHHHHPHLHPHHNSSASSVNNILGISPPLLRHTSGESQSPPTLSLQDVMANSISRSFSQQANKDNTSPSPAHSASSAMDHNDQYKRPSISVIKNIGGTDTSRFATAPNLLGGHHNSNHHHQQQYHHQHHSQNAANNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPLDDRTAGSTSGGNTSSSSANNSKNSNIPGLSAVNSLDKMSKSSGAAGPSVSQKQSAAGKSNPPFPNTSPNGMKIPPALFEPSLAAQLQYSPHLFWHSGFSPLQMDFSNRSQAAAAVAAAAAAGGGPGNPSFAANAEFLKSQMMQRFHEERGPPNSIGSPPAAAAISNSTSSSSSSTNNTKSVRDIVENLYDPSSANGSFLDGIIRKSLDRKNSEHGALLDQLVKNSKPPPPRLMMNNDRTPGDLLKLKRSGSPMPYHTAMDIKRERASPSSDSSNSDSEQNHRRDTDSEPLPPSQHHAVGLHHAMLAANSDLNGAQHGLTSENNLPTSSAVSSSLSAVTTSILQDKLGQIKSEAEDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01223304;
- 90% Identity
- -
- 80% Identity
- -