Fcup018914.1
Basic Information
- Insect
- Ferdinandea cuprea
- Gene Symbol
- JARID2
- Assembly
- GCA_963576555.1
- Location
- OY754960.1:63439618-63474693[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9 3.3e+04 -4.1 0.1 51 73 756 775 754 784 0.67 2 2 1.2e-21 4.3e-18 66.3 0.0 6 89 1290 1371 1285 1371 0.92
Sequence Information
- Coding Sequence
- ATGTTAATACAGTCtagtaaatatttgtattttttctttattagaaCCAAAGTGCAGGCACAAAGGAAATTTGCGCAAGGTCAAAGTGCACCTGCGTCATCCTATACTTCTGCCATAGCTTCTTCATCAACTGCAGTAGCAGGTAGCAGTACATCTTTAGGCAACTCCTCGACGCATGAAAGTCGAGAACCACCAACAGAAATTTTACCCAACAAAAGGCCGAAAACGGAAGACTTCTTAACATTTCTTTGCTTTAGGGGCACATCAGCATTACCGGCTCATTTAGATTTTCTTAGTCAAAACACAGCCCAATCATCGAAAGTGAAACTTCATTCAAATGAGAAAACAGAAGATAAAGAACATTCGCCAAATGCTAGTGTTAACAAATCTACGAGATTAACTTCAGCTAAAATAAAAGATCAAATTGcaacagaagaagaaaaatcaaCATCAGCGGTAATCTATAGGAAATGTGATGCCAAAAAACCGACTGGCAAACAAAATTACGAAACAAAAGATAGAAAAGTAATGTCATTCGCTGTCCGCAAGAGAGCAGAGCAATTTCCCGAGGGTAATAGGCGTGGCAGACCGTCAGATAAATCAATGGAAAAgcgaaacaaatttacaaaaggAAGTCGTCGATCTTTTCGCAACAAAAATACAACTAAACACTTAGCGGAGCCCGATTACCATGAAACACAGAATAATGATTTTGATACCGTTTCAATAGGTAGTGTACAAGATACAATAAAAGTAGCGAAAACTCAACAAAAAGAACCAACAGGACGCATGACACGCCAGAGAGCATTTTTTGAACCAGTAAAAGTAATTCGACGTGAGGAAAATGACGATGAAAAGAAAATGGAGGATGGTGAAGATAATACAAACGAAcacgaagaaaataaaatcaaagaattGTCACTACAGCCGACAACTCCAAAAGAAGGAATGCTTAGAAAGAGGGAACACCCTAAACTGATGAGGGATGAAAAGGAAGACGAAGAGGATTTCTTGCTCAATGAAGAGGTGAATGAAACAAAAAGGAAACTCGAAAATAGCTTTAGTGATTCAGACGACGAACCACTTGctataaaattaacaaagaatAGCGAAAAAGACTCGGACAACTCAAAGAAATCGGATATCCCTCCTGTAATTAAACTCAAAACTCCCAAAGATGATCGGACTGGCGAACTAAAACTAGCACCGAACATTTTAAATCTTCTACCCCTTACAACACCAGCAGCTACATTGCAGGGCAATGCACGAATATCTACACATGTGCATCCTGTTTCGTCAGATAATAGACTCAAAATTGATGATAAACCAAATGTTCCAGCTCCTTTGACGAACTCATGTCCACCTTTTATATCACGGCAGCCAGTCGTCACAATTCTACAGACCCAGCCATCTTTAAATCCACTCCCTCTGACCATTAAATATCAAACTCCTCCCACAACATATCCACCCCCAATTGAGGCATATCCATCTCCAAAAATTAATCCAAACTTTCTCACTCCAAAGTTCGACCGAAATATTGATCGACGTATTGTTTGCATGGATGGGTCCTTATCGCTATCAACTATGCAAAGACAAAATTCCAGTTTCCCGTCACCGTCTGCAGTAAAATTTGACATGTCCACTCCAAAAACACAAACCACATTAAACGTCAAGATTCCTATTGTGCCATCTGGAACATCTTCAAATGCCGCCTCTGTTGATCCACTTAAAGATGAAATAGGAAGCATTCTTGCAGCTAACTTAATGCCAAGCAAAGAAGAATCAggtaaaatttttggaattgcCAGTGTTAGCTTAGCACAAAGCTCTGGTCCAGATAACACCAAATGTACACTGGGCAAATGTGGATCCATCCATAAGCCAGTCTTAGGGCCTGTAGTTCCAACAGAATCATATTTAGGTGAACAACTTTCTAGCAAAGAAAGGCGAAAAGCAAAAGTGAACATGACTCATGAGCAGATCCAGAAATGGTTGATTGAATGCTCCTCCAACCCTGATGAAATTCAAGACGACTTAGATGATGATTTTGACGATAACTTGCGTCCTAACTTATACACAACAACTCCACCTCCTAATAGAGATGACAAGGAGAGTACTTCATTTAGTTCTTCATCAAAGACGACAAGGGATTTGGGTAAGAGTGAAAGCGCCTGGTCTGGCAAAGGGCCTTCACTTAAGGCCACCCCAGTGATTGTGCCGAAGGATGATCAGCGACCTGAAGAATGTTCTCTCTCATTTGTCGAGGCAAACAAGGAATTAAGAGAAGTTGCTAAAGACTACCAGGTACAAAAGACGACAAATGTTAGTAAGAAAAATGAAACAGTCGTTAAATCAAAGGAGAAGAATAAATTAGACAAAACAAAGGAGGAGAAggaaccaaaaaaatttcaagaaaagtTGTTAAAGAATGGAGGACAGCAGAAAGGCACAAAACCGTTGAATTTAACGAATTCAGCAGTCACCACTTCCTCGCCTAGGcagcaaaaaaaagttgatgAAAGTAAGAACAATTCTATTGCAACTCAGCCTGATAAAGTAATGACGGGATCGCCAGCAAGCGCTTCTAAAACGCCCAAACGAGCAACAGTATACAATTCTAAATTAAAAGAATCTACAACTACGAGTCATAAAAAAAAGGCTATTTTCCCCTATACTTTTGAAGCCTTTTCGGCAGACAATGAGAAGAGTATATATTCTTTTGATAAAGAGGAGGACGACTCAAAATTTTCATTATCCAAACCGTTTCGTAGACAAAGTTGTCGCGAATCCCACACAGACGATAAAGTCCAACAAGATCTGCCATCACATGTGAGTATTGTTGACAAGAAAAAAGGGATTACACCGCAGAACAGCATTTCTGTTACATTGAACCCGGATGAGAATATTAAATTGGTTAAAGTCAGTCTTGAGTCCGAGCAAAGTAATCGTGCTGAGGCTACCGATACaactaatgaatttaatttagcaGATTCTGATTCCGATGTTCATACGTTTTATATACCCCTTCAAGGAGCAGGAGTGGGAGGTGGTGGTAAAAGTAAAGCGGACTTAATTCAAGGCGTTGCTGTAAAACTAGGTCGAGAAGGACCTGAGGGACCCAACCAAAAAGTTGTCATGCACGCCACATTAGTAACAAAGTCTCAAATGGGCTCGAATTCAAAACCGATTCCCGATTCTATGAATGTTTCCGAAATAGTTAAAAATCTGCTCAGCTCTGCCACTGTGTCCGGCAACAAGGAAGCGATTGATGAAACAGCTATAACAATTCCCGCAAACTCCGCTTTAGTAACAAATACCACTTCATTAGCCGTTACGCAACAGAAAGATTCAAACGTGCAACATATAGCAGGTGGAACATCTTCAGTGGCAGTTGGCAGCTCAAAGAGTGTACCCGTAGGTACGGTCCAGCCTAGATTTAAATCTACCGAATCTGTTGCCACTCAGTCCAACCACCCATCTGGTTCTGGTGTGGGAGGTGGTGCTTTAACAAGAGTCAATTCAAACTCTTCTCTATTTTCTGGTTCAAATAAATCTCGTGGTCAATCCAGTAAGAAGATCAAAGACGATACACCAATAAAAATGTGCAATAATACAGCTTTTCCCCGCCATGATGATCCAACACAAATGGTGGAGGCTCCAATTTTTCGACCAACAGAAAAGGAATTTCAAGATCCCATGGAGTTCATTGAAAGGATCACACCGATTGCAGCACGTTTTGGAATCTGTAAAATAATACCCCCAGCAAGCTTTAAACCAGAATGTAGAGTCTCTGATGACATGCGCTTTACCGCATATAATCAGTACGTGCATAAGATGCTTCACCGATGGGGTCCCAGTGCCAAAGAATTgagtgcaattaaaaaatatttggctaCGCAAAGTATTGTGATGAATCATCAGCCATGGATTGGAGGTATGGAAGTAGATTTACCCAGGCTTTATCATACCGTTCAAGAATTGGGTGGTCTCAAAgaggttattgaaaaaaaaaaatgggctcGTGTAGCAGAAGATATGTGCATTCCAAAGTTAGCGCAGGATCGCGTCACTAAACTCGACGATATTTACTGTAAGTATCTTCTTCCATACGATACATTATCGCCCGGTGAAAGGCAGAAACTGTTTGATGAAGTGGAAGCTGACTGGGCAAAACGCGAGGCTAGAGCAAGGCGAAACGCTGATCGCTTTGTCAACACTGAAAGCGTAAGTAATGAGGACGATGAGGTATCCAGCGAAGATGACGAAGAGTCTGAGGAAGAAGTCGATGGAGTATCAATGGAATGCATTGTAAAGGGTCGAAGTATGCCACTGAGTCAGTTTTTCCGAATTGCCAGAAATACAATGTCTTTATGGTTTAAGAACACAGATCCCTCTGTGACTGAGGTGGAGGCCGAGTTCTGGCGACATGTGGCTGTTCGTGATAGTCATGTTTGCGTTCATTCCGGATCGATTGATTCAAGCGGCTGGGGATACGGATTTCCATCACCAGGGCCAAAGGGAAAAAGTTCATTATATGCCCGACATCCGTGGAACCTAAAGGTGTTGACAAACAATCCTGGATCTGTGTTGCGGTCATTGGGGCCGGTAATGGGTGTGACTGTTCCAACATTGCACGTAGGTATGCTTTTTAGTGCATGTTGCTGGTATCGTGATCCGCACGGTCTCTCTTGGATAGAATACCTACATACTGGTGCAAGTAAGTTATGGTACGGAATTCCTGATGATCAGAGTGCCAACTTCCGATCAGCGCTTACTTCACTCATCCCAACACATTGTCAAAATAAGACAATATGGCTTCCTTGTGATACAGTGATGGTGCCTCCTCATATGCTGACTGACCGTGGTGTATCATTGTGCCGGATAGAGCAAAAACCCGGGGAATATGTTGTTATATTTCCAAGGGCCTATACATCGAGTGTTGCAACTGGCTACGTTGTTTCGGAAAGTGTTTATTTTGCTACAAGCTCTTGGCTTGAACTTGGTAAAGATGACTTTAGAGATATTCATGAAAGTTGTGAGCCGGCCATGTTTTCCTTGGAACAGTTGTTGTTTTCACTGGCGTCTGATCAGCGCGTAGCAGTCGAAGTACTGTCTCAAATGCTACCTATGATAAATGAAGTGTTTGAAAAGGAAGTTGCGGCTAGAGAACAACTCAAGGCTGCTGGTGTAACTTCAACTGAAAAAATTCTTATGGAAAAAACTTCGAAGTCCAAAAAACATCCTGTTGTTTCGATTCAAAATGAATGTGATTTATGTCGAGCGAACCTTTATATATCTATGGTAAAAACTGATGAAGGAAATATTTACTGCCTGCAGCACGCCCTCAAGAATCTAAATAAAGCCAACATTCAAGCCAAACAATGCAAGCTCATATTTAGCTATAACATTGAAGATATCGAGAATCTTATCAAAACTCTAAAGGATCGAATTGTACAGAAGCAAACTGCCGCAAATAAGAAATCAAAGTAG
- Protein Sequence
- MLIQSSKYLYFFFIRTKVQAQRKFAQGQSAPASSYTSAIASSSTAVAGSSTSLGNSSTHESREPPTEILPNKRPKTEDFLTFLCFRGTSALPAHLDFLSQNTAQSSKVKLHSNEKTEDKEHSPNASVNKSTRLTSAKIKDQIATEEEKSTSAVIYRKCDAKKPTGKQNYETKDRKVMSFAVRKRAEQFPEGNRRGRPSDKSMEKRNKFTKGSRRSFRNKNTTKHLAEPDYHETQNNDFDTVSIGSVQDTIKVAKTQQKEPTGRMTRQRAFFEPVKVIRREENDDEKKMEDGEDNTNEHEENKIKELSLQPTTPKEGMLRKREHPKLMRDEKEDEEDFLLNEEVNETKRKLENSFSDSDDEPLAIKLTKNSEKDSDNSKKSDIPPVIKLKTPKDDRTGELKLAPNILNLLPLTTPAATLQGNARISTHVHPVSSDNRLKIDDKPNVPAPLTNSCPPFISRQPVVTILQTQPSLNPLPLTIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNIDRRIVCMDGSLSLSTMQRQNSSFPSPSAVKFDMSTPKTQTTLNVKIPIVPSGTSSNAASVDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYLGEQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDNLRPNLYTTTPPPNRDDKESTSFSSSSKTTRDLGKSESAWSGKGPSLKATPVIVPKDDQRPEECSLSFVEANKELREVAKDYQVQKTTNVSKKNETVVKSKEKNKLDKTKEEKEPKKFQEKLLKNGGQQKGTKPLNLTNSAVTTSSPRQQKKVDESKNNSIATQPDKVMTGSPASASKTPKRATVYNSKLKESTTTSHKKKAIFPYTFEAFSADNEKSIYSFDKEEDDSKFSLSKPFRRQSCRESHTDDKVQQDLPSHVSIVDKKKGITPQNSISVTLNPDENIKLVKVSLESEQSNRAEATDTTNEFNLADSDSDVHTFYIPLQGAGVGGGGKSKADLIQGVAVKLGREGPEGPNQKVVMHATLVTKSQMGSNSKPIPDSMNVSEIVKNLLSSATVSGNKEAIDETAITIPANSALVTNTTSLAVTQQKDSNVQHIAGGTSSVAVGSSKSVPVGTVQPRFKSTESVATQSNHPSGSGVGGGALTRVNSNSSLFSGSNKSRGQSSKKIKDDTPIKMCNNTAFPRHDDPTQMVEAPIFRPTEKEFQDPMEFIERITPIAARFGICKIIPPASFKPECRVSDDMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHQPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEDMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPGERQKLFDEVEADWAKREARARRNADRFVNTESVSNEDDEVSSEDDEESEEEVDGVSMECIVKGRSMPLSQFFRIARNTMSLWFKNTDPSVTEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKSSLYARHPWNLKVLTNNPGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEYVVIFPRAYTSSVATGYVVSESVYFATSSWLELGKDDFRDIHESCEPAMFSLEQLLFSLASDQRVAVEVLSQMLPMINEVFEKEVAAREQLKAAGVTSTEKILMEKTSKSKKHPVVSIQNECDLCRANLYISMVKTDEGNIYCLQHALKNLNKANIQAKQCKLIFSYNIEDIENLIKTLKDRIVQKQTAANKKSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -