Fcup023606.1
Basic Information
- Insect
- Ferdinandea cuprea
- Gene Symbol
- retn
- Assembly
- GCA_963576555.1
- Location
- OY754961.1:50516363-50591176[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 3.9e+03 -0.8 0.0 41 65 138 163 133 173 0.76 2 2 3.4e-26 1.3e-22 80.9 0.0 2 89 311 396 310 396 0.96
Sequence Information
- Coding Sequence
- ATGGAACAAATCTTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCgttggcggtggcggtggcggtggtgtTGGTACAACCACCATAAAACGACAAAAGATAACAGTTATCATCTTAACAATTTTACAACGGCTTTCGAACGACGATCATTCTGAGGACGACATGAGAGACTGCGAGTCAGTTGATGACGAGAATACCAGCCGATTAAACGCCTCGATGTCCAATGGCATGGGCATAGACTACGGAGGGATCGGAGGTAGTAGAAGTCCAGAACAACACAACGCAGAAATTCAAATGAGTCACCATCATGCACAGTTCGCAACAAATCATCCACTGGGAGCACTGGGTAACTTCATGAGCATGGGCGGCTTGCATAGTATCCCAAATCTTCAGCAGCAGCACAACGATGTGCTGGAAAAACTGAAAATGCAGGTCCGCGATATGAAAGTTGGCCTCATGGACCAGGAATACCCACCACATGTAAACTTTGGCTCAAATGTCATTCCAACCCCCATTAATACAGCGTTCACAATCCCGTCAACTTCGCATGCCTCGTTCAATCATTCTCCGCAGAATCTATCGCAGCAATCACCGCAGCCGCAGCAGAACTTGCTATCAACgcaccaacagcaacagcaacagcagcaacaacaacaacagccgcAATCACAATCACAAACGAGTTCCCAATTGTTGCCGAATGGCTTTTCGTTCACATCACCCTCAGCCCCAAGCACAAAAGACGTAAATCCTGCGTCCAATTCATCAACGTCCAGCGAAACATCTAATTCATCACAACAGAATAATGGATGGAGTTTTGAGGAGCAGTACAAACAAGTGCGACAACTCTATGAAATAAATGATGACCCTAAGCGCAAGGAGTTTCTTGACGACTTGTTTTCCTTTATGCAGAAGCGAGGTACGCCCATAAATCGCTTGCCCATCATGGCGAAATCGGTGCTAGATTTGTACGAGTTGTACAATTTGGTTATAGCAAGAGGAGGACTCGTAGACGTGATAAATAAGAAGCTGTGGCAGGAAATCATAAAAGGACTACATCTGCCGTCGAGCATTACCAGCGCTGCATTTACCTTGCGCACGCAGTACATGAAATATTTGTATCCATACGAATGTGAAAAAAAGAACTTGAGCTCACCCGCCGAACTTCAGGCTGCTATCGACGGCAATCGCCGGGAGGGACGTCGTTCCAGCTATGGCCAATTCGAGGCTATGCACAACCAAATGCAGATGCCCCAAATGGGAAGAAATAATCTCCCTGGTGCAATGCAACAAATGTCTCCACTTGCCCTGGTTACTCATGGCAATCAACAAGCGGCTGCGGCAGCTGCTCATCATAGACTGATGGCACCATCCTTTAGTAATGTACCCAATTTGGTACAACATGAGATCGAGCAACGTATGATGGAATATATTAAACTGATGCAAACGAAAAAAGAACAACCCCGCCCAAGATCCCAGAGTCCAGAGACAACCACCCGCGATGCATTAAATGCCCTCGAAATGTCGCGTGTAGCTTTGTGGTCGATGTATCACAACAATACAAGTCCACCAGCATCGGTGAATACTTCACCACAAGGCATTGAACCACAGCGCGAAGCATTAAACCTTTCGGACTCTCCACCCAATATCATAATCAAACGTGAGCGTGAACGTGAACCTTCGGAATTAGGGGTAATCTCGGATAGGGAAGATTTCAACCAACCACCACCGGCGAAGCGAGGATTcccaacaaatttgtatataccTCCGGTACGGAGTAGCTTTCATGAGCACGACGGTGAAGATACAGATATTTCCACTGCTAATACTTCACATGAGCACGAAGAATTGAACCGTCACGATATGGAAATGAAGCCCCCTTCAGAAAGAAACGGACAACATACACCTTTGTTGCTGTCAccacagaaaaaacaaaatttaaactttaacaCCAATGAAGCTGTTATGAGTGTTCAACATAACCGCCTGCAGGAACAACAAAAGATTATTCCGCCTGTAATCACCAATGCAGAGTTGTCACTTCTCTCGGGGATGCAGTTCAAGTTGTCACGTAAATCTACCGGCGATAGTGGAGATCAACAACTAATGGTTAATCTTGAACTGAACGGCGTCAATTACGAAGGTGTCCTGATTGCCAGACCAACGCCTTCGACACAAAACTCAGTCGCTACAACAAACGCATCAATACCATCGCCCTCACCAGCCATTATTTCCAATGGTTCAAGTGATGTTCAGAAGCAAACACGCTTAGAGGAGAGACCATTGTCCCTCATACAAccataa
- Protein Sequence
- MEQIFGVGVGVGVGVGVGVGVGVGVGVGVGVGVGVGGGGGGGVGTTTIKRQKITVIILTILQRLSNDDHSEDDMRDCESVDDENTSRLNASMSNGMGIDYGGIGGSRSPEQHNAEIQMSHHHAQFATNHPLGALGNFMSMGGLHSIPNLQQQHNDVLEKLKMQVRDMKVGLMDQEYPPHVNFGSNVIPTPINTAFTIPSTSHASFNHSPQNLSQQSPQPQQNLLSTHQQQQQQQQQQQQPQSQSQTSSQLLPNGFSFTSPSAPSTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRSSYGQFEAMHNQMQMPQMGRNNLPGAMQQMSPLALVTHGNQQAAAAAAHHRLMAPSFSNVPNLVQHEIEQRMMEYIKLMQTKKEQPRPRSQSPETTTRDALNALEMSRVALWSMYHNNTSPPASVNTSPQGIEPQREALNLSDSPPNIIIKREREREPSELGVISDREDFNQPPPAKRGFPTNLYIPPVRSSFHEHDGEDTDISTANTSHEHEELNRHDMEMKPPSERNGQHTPLLLSPQKKQNLNFNTNEAVMSVQHNRLQEQQKIIPPVITNAELSLLSGMQFKLSRKSTGDSGDQQLMVNLELNGVNYEGVLIARPTPSTQNSVATTNASIPSPSPAIISNGSSDVQKQTRLEERPLSLIQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314926;
- 90% Identity
- -
- 80% Identity
- -