Basic Information

Insect: Falcaria lacertinaria
Gene Symbol: -
Assembly: GCA_951449985.1
Location: OX602116.1:1318564-1324843[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.015 1.1 10.2 2.9 3 23 32 52 30 52 0.94

2 14 0.0011 0.077 13.8 2.0 1 23 92 115 92 115 0.96

3 14 0.0019 0.14 13.0 2.7 1 23 117 139 117 139 0.97

4 14 8.2 5.8e+02 1.6 0.4 1 8 148 155 148 170 0.84

5 14 0.013 0.94 10.4 0.0 1 23 175 197 175 197 0.98

6 14 6.7 4.8e+02 1.9 2.0 3 23 227 248 226 248 0.89

7 14 0.21 15 6.6 0.7 1 12 255 266 255 269 0.85

8 14 8.3e-06 0.00058 20.5 0.1 1 23 285 308 285 308 0.92

9 14 9.2 6.5e+02 1.5 0.8 5 20 321 336 320 340 0.86

10 14 1.1 76 4.4 1.0 2 23 346 370 345 370 0.88

11 14 0.014 0.96 10.4 0.4 1 20 402 421 402 424 0.93

12 14 0.00043 0.03 15.1 1.1 1 23 430 452 430 452 0.97

13 14 2.5e-07 1.8e-05 25.3 1.2 1 23 458 480 458 480 0.98

14 14 3.2e-05 0.0023 18.7 1.4 1 23 485 508 485 508 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.015	1.1	10.2	2.9	3	23	32	52	30	52	0.94
2	14	0.0011	0.077	13.8	2.0	1	23	92	115	92	115	0.96
3	14	0.0019	0.14	13.0	2.7	1	23	117	139	117	139	0.97
4	14	8.2	5.8e+02	1.6	0.4	1	8	148	155	148	170	0.84
5	14	0.013	0.94	10.4	0.0	1	23	175	197	175	197	0.98
6	14	6.7	4.8e+02	1.9	2.0	3	23	227	248	226	248	0.89
7	14	0.21	15	6.6	0.7	1	12	255	266	255	269	0.85
8	14	8.3e-06	0.00058	20.5	0.1	1	23	285	308	285	308	0.92
9	14	9.2	6.5e+02	1.5	0.8	5	20	321	336	320	340	0.86
10	14	1.1	76	4.4	1.0	2	23	346	370	345	370	0.88
11	14	0.014	0.96	10.4	0.4	1	20	402	421	402	424	0.93
12	14	0.00043	0.03	15.1	1.1	1	23	430	452	430	452	0.97
13	14	2.5e-07	1.8e-05	25.3	1.2	1	23	458	480	458	480	0.98
14	14	3.2e-05	0.0023	18.7	1.4	1	23	485	508	485	508	0.97

Sequence Information

Coding Sequence: ATGTCGGCGGATCTCGCCGATGCCGTCGCGAAAGGTCTGGTGGAGATTCCTGGGCTGAAGCGGACAGCGGTGGACCGGGTGGGCGGTATCTTCTGTCATATCTGCCATGCTACGTACAGCACCAAGAAGGAGTTCGACAACCATTACGAGGCGCACGGCACCGGCCGCACGGCCGCCGAAATCATCTACACGTGCCTCATCTGCCGCAGAGAGATCCCCGGCTACCCCAGCTTCCGCAACCACTGCTACAACAAACATGCCAACAAAGATAAATTCAAATGCATACACTGTGGCAAACAAATTTCAAAGTCTTCACAACTGCAACAACATATTGATACCAATCACACATTCAAGTGTAGTTCATGCAAGAAACAATTTCCATCGAAAACTGAATTACACCTTCATGAATTAATCCACAAGAACGAAAAGGACAAGCCTCCTTATGAATGCAACTCATGTGGCAAGCTTATAGACAGTGTTGACATGTGTGAGCTTCACATCGACGAGCACACCACAATCACATACCCTTGCCCCATTTGTGATGAAGATTTACCAAGTAGAGCTGATGCTGCCAGCCATATGAGCATACACTTTGGCGAAGTACTTACTGGTATTGATGAAATAGAAGAACCAACGGTAAAAGAAGACTGTTCTCTCAACATTGTAGGTGGCATCTTGTGCTGCTATTGCGGTGACTTATTCAAAAACCGAGATGAATTTGACAGCCACTTCTCATTAGAACATTCAGACAAAGTATTTGTTTACTCATGCAACATTTGTGGAAAACAATATGAAAAGAATAGATATTCAGCTTTTGCAAATCACTGCTATCTTCACATTGCTAGAGATCGATTTgaATGCGAGGAATGCGGCAAGACATTTCCTCGACTGTCATTGCTCGTGGTCCACACTGAAGCATTCCACGGGTCAGGCGATGCGGGGTCGAAGCCCTTCGTATGCGTGTGCGGACACGCCTTCGGCACCGAAAAGCGCCTGCGCGAACACAGCTTCCTCGCGCACAATGAGGTCTCCATGCAATGTCTGCACTCTGGCTGCAATATgctGTTCCAGTCGTGGCAGCAGCTGGCGCTGCACCGCAAGGCGCGGcacgcggcgggcggcgcgtggTGCCGGCGCTGCGGGCTGGCGCTGGGCTCGCGCGCGGCGGCCGAGCGCCACCTGGGGCTCCACCGCCGCGCCGCCTACCGCTGCCCCGTCTGCCGCAAGCCCTACCAGGAGAAGTTCACGCTGCTCAAGCACGTGCCCGTACACTTCGAAAGCGTCTTGCATGTCTGCAAGGTGTGCGGGCGCGCGTTCCCGCTGCGCAGCCGGCTGGTGCAGCACAGCAAGACGCACTCGGCGCTGCGCGGGCACACGTGCCGCTACTGCGGGAAGGGCTTCGTCACCGCCTCCAACCTGCAGCAACACCTCAACGTGCACACCGGCCACAAGTACCCCTGCCCGCACTGCGCCAAGACCTTCACCAGCTACCCCAACTGGCTCAAGCACCTGAAGCGCATGCACAATGTCGACGGGAAACTCATCCGCAAGagCTTGAACGCAGCCAAGAACGCAGAAACACCAGTTAACCAAAACAACAACGATAGCAGTGAAGTGACCACGAATGTGGAAAGTGATATTGGTCAGTTTGAGCCGGGAGACCTCGCGGACTCCGAGGACAGTTCCCTGGACGGCATCGACCCCGCCACGCTCAACCGCGAGTGGCAGATGCTCGGCAGCACCACGCTGGACCTGCCCATACCCACGCTGCTATCAGAAGAAGACACGACTACCACAGAGACCACATCATCCAGCATGGAGACGGTGCTGATCCCGCGCGAGTACGGCCCCGAGATCGGCGGCGACGCGGGCCAACTGACCGACCTGGACGACCACATGCTGCCGCACATCGACccgctgcttaccatcaaggaCACGTACGTACCCCAGCCGCAGTACCCTGCCTACCAGCCGCAAACCTCCTGGGAGCCACCGGTCATCACCAAATTCTACACAAACTCCTTCGAGGACATGACCAATGTGAACAGACTGTCCATCATGCAAAcagacatattttaa
Protein Sequence: MSADLADAVAKGLVEIPGLKRTAVDRVGGIFCHICHATYSTKKEFDNHYEAHGTGRTAAEIIYTCLICRREIPGYPSFRNHCYNKHANKDKFKCIHCGKQISKSSQLQQHIDTNHTFKCSSCKKQFPSKTELHLHELIHKNEKDKPPYECNSCGKLIDSVDMCELHIDEHTTITYPCPICDEDLPSRADAASHMSIHFGEVLTGIDEIEEPTVKEDCSLNIVGGILCCYCGDLFKNRDEFDSHFSLEHSDKVFVYSCNICGKQYEKNRYSAFANHCYLHIARDRFECEECGKTFPRLSLLVVHTEAFHGSGDAGSKPFVCVCGHAFGTEKRLREHSFLAHNEVSMQCLHSGCNMLFQSWQQLALHRKARHAAGGAWCRRCGLALGSRAAAERHLGLHRRAAYRCPVCRKPYQEKFTLLKHVPVHFESVLHVCKVCGRAFPLRSRLVQHSKTHSALRGHTCRYCGKGFVTASNLQQHLNVHTGHKYPCPHCAKTFTSYPNWLKHLKRMHNVDGKLIRKSLNAAKNAETPVNQNNNDSSEVTTNVESDIGQFEPGDLADSEDSSLDGIDPATLNREWQMLGSTTLDLPIPTLLSEEDTTTTETTSSSMETVLIPREYGPEIGGDAGQLTDLDDHMLPHIDPLLTIKDTYVPQPQYPAYQPQTSWEPPVITKFYTNSFEDMTNVNRLSIMQTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -