Flac012081.1
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- -
- Assembly
- GCA_951449985.1
- Location
- OX602124.1:1230435-1239435[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00045 0.032 15.1 1.3 1 23 283 305 283 305 0.99 2 12 0.0003 0.021 15.6 3.7 2 23 313 334 312 334 0.95 3 12 0.37 26 5.9 0.6 1 23 338 360 338 360 0.92 4 12 0.0002 0.014 16.1 1.1 1 23 365 388 365 388 0.98 5 12 0.0065 0.46 11.4 0.1 1 23 392 415 392 415 0.90 6 12 0.95 67 4.6 0.1 2 21 429 448 429 453 0.91 7 12 0.0013 0.09 13.6 0.4 3 23 462 483 462 483 0.96 8 12 0.14 10 7.2 0.2 3 23 504 525 503 525 0.96 9 12 2.2e-06 0.00015 22.3 0.3 1 23 536 558 536 558 0.99 10 12 2.3e-05 0.0016 19.1 0.6 1 23 564 586 564 586 0.99 11 12 1.3 92 4.2 6.2 1 21 592 612 592 614 0.92 12 12 5.9e-05 0.0042 17.8 0.3 1 23 620 643 620 643 0.98
Sequence Information
- Coding Sequence
- ATGGAAGGTGTGAAAGCGTGTCGCATATGCCTCGTAATGGGTGTAAAGATGCACCATCTCAATGCATGTACGTTTATTGAGGCCTGTTTGGACACTTTAATCGGTACagatcccTTGATCTTGAGCGAGCTGCCCCGATATGTCTGCTACGAGTGTGGTGCTCTGCTGGCTAAGTTTGGCTCCTTCAAGAGGAAGTGCATGAGGGGGCAGAATGCACTCAACAACATACTGAACACAAATGGAAGGATCACAGCTGACTCCATCCAGAAGGTAGACAGGCAAGTTTTATTCCTCACATCAAGCCTGTCACACCATACGGTACCTGACTCCGAAATCAAGACTTTGCAGCTTAATGTCACAAGTGCGGATTCTTTAGTTAAAGCAGAATCAGATTTTGAGCATGACACAAAGATGACTATACAAGTTGCATGCGTTAAGGAAGAAGACATAGATGATTTCCCATCACTTGGCGGGAGTAGTGATGACGAACCTCTGTGTTACCATAAAAgcaaaaagaagaaaaaaggtGATAAAGCAGTGAAGAAAGATAAAGCTGGTATAAAGTCTCTTGAATTCAAATCGGAACAGTGGTGTGAAAATGCCGAAACAGAAACAACGGCAGTATCAGAACTAGTGCAGAAAGTGAAGAAGAAACGCGGTCGCCCTTCAACCAAAGATCAGTGCAAAGAGAAGAAGCCTAAGAAGCCAAGGATCTGCAAGAGCACTGGAGACGCCACCATCAACATGGTGCTGGACGAATATGTTACAGTTATCAAATTGACCGAAGAGCAACAACGAGAAGAGATTTCTAAGCGCAAGGAGTCGTCCAACTACCAGAACGCGCCGTACCAGTGCGAGCTCTGCTACAAAGGCTTCATAGACAACAAGGCGTGGAACCATCATGTGCAGAAACATAAACCTAGCCCAGGCGATATGGAGTGTACGGTGTGCAAGTTCAGGTTCAAGACGAAAAGGCATCTTCAGAAACACGCGGCGAGCCATGAGAAGAAATATGCTTGTAAATTCTGCCCCTACGTGTCTAAAACAACGACTCAGGCCAATCAACACTACGGTTGGCATAAGGGGGTCACATACAAGTGCCAGTACTGTGATGAAGTTTCTACTAAATGGACGTCTTACCTAAGCCACCTGCGCATAAAGCACCCGTCCCAGTTCATATGCGGCGTGTGCGGGTACTCGTTCGTCAGCAAGCTGGGCCTCGTCATGCACAACACTATGATGCACAAGGATGTCGACCAAACGGCGGAGGCGTGTGTGGGCCCGTACTGCGAGGTGTGCGACGTGCAGTTCCTCTCGGAGGAGGCCTGGAAGCGGCACATGGTCACCTCGGTCAAACACGCGCCGGACGACGTCAGcAAGGGTTGCCGCGTGTGCGGGGAGTCGTTCTCGTCGCGCGAGGAGGCGCGCGCGCACCACCGCGCCGCGCAcgcgcgcccgcgcccgcgcaaCTACGGCAAGCACGCGCCCGCCCGCGCCTGGCCCGCGCCCTGCGAACACTGTTCGGAGGAGATAAGCAGCGCGCGCGAGTACTGGGTTCACTTCCGGCGCGCGCACCCCGACAAGAAGTACCCCATACAGAAGAACTACGTGTGTGACATCTGCGGGAAGAGCTTCCGGGGCAACGCGTTCCTGACGTACCATGCGCGCACGCACTCAGCGGAGCGGCTGTACCAGTGCGGCGCGTGCCCCAAGGCCTTCCACAACCGCGCCAACCTCACGCTGCACGCGCGCACGCACTCCGAGCGCCGCCCGCACGCCTGCCGCCTCTGCTGCAAGGCCTTCAAGACCAAGGGCGCGCTCGACCGACACTTGCGGTGCCACACGGGCGAGAAGCCGTACTCGTGCGAGGTGTGCGGCAAGGCGTTCGGCCAGTCCAACAGCCGCAAGCTGCACGTGCGCACCGTGCACCTGCGGCAACCCGCGCCCTACGTGTCGCGCGCCAGGCTCGACCGCCGCGCGCGCAACAAGGATACACCCGTGCCTTACATCACGTAG
- Protein Sequence
- MEGVKACRICLVMGVKMHHLNACTFIEACLDTLIGTDPLILSELPRYVCYECGALLAKFGSFKRKCMRGQNALNNILNTNGRITADSIQKVDRQVLFLTSSLSHHTVPDSEIKTLQLNVTSADSLVKAESDFEHDTKMTIQVACVKEEDIDDFPSLGGSSDDEPLCYHKSKKKKKGDKAVKKDKAGIKSLEFKSEQWCENAETETTAVSELVQKVKKKRGRPSTKDQCKEKKPKKPRICKSTGDATINMVLDEYVTVIKLTEEQQREEISKRKESSNYQNAPYQCELCYKGFIDNKAWNHHVQKHKPSPGDMECTVCKFRFKTKRHLQKHAASHEKKYACKFCPYVSKTTTQANQHYGWHKGVTYKCQYCDEVSTKWTSYLSHLRIKHPSQFICGVCGYSFVSKLGLVMHNTMMHKDVDQTAEACVGPYCEVCDVQFLSEEAWKRHMVTSVKHAPDDVSKGCRVCGESFSSREEARAHHRAAHARPRPRNYGKHAPARAWPAPCEHCSEEISSAREYWVHFRRAHPDKKYPIQKNYVCDICGKSFRGNAFLTYHARTHSAERLYQCGACPKAFHNRANLTLHARTHSERRPHACRLCCKAFKTKGALDRHLRCHTGEKPYSCEVCGKAFGQSNSRKLHVRTVHLRQPAPYVSRARLDRRARNKDTPVPYIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -