Flac017649.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Falcaria lacertinaria
Gene Symbol
-
Assembly
GCA_951449985.1
Location
OX602134.1:5465397-5486127[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.13 8.9 7.3 0.5 1 23 508 530 508 530 0.97
2 10 0.08 5.7 8.0 6.4 1 23 547 569 547 569 0.97
3 10 0.00011 0.0076 17.0 2.3 1 23 576 598 576 598 0.99
4 10 4.6e-05 0.0032 18.2 0.1 1 23 604 626 604 626 0.93
5 10 0.00012 0.0085 16.8 0.1 1 23 632 656 632 656 0.91
6 10 1.5e-05 0.001 19.7 1.5 1 23 662 685 662 685 0.95
7 10 9.6e-06 0.00068 20.3 2.7 1 23 691 714 691 714 0.97
8 10 6e-06 0.00042 21.0 0.5 2 23 721 742 720 742 0.97
9 10 8.3e-05 0.0059 17.4 3.2 1 23 748 770 748 770 0.97
10 10 0.0029 0.2 12.5 1.7 1 23 776 800 776 800 0.93

Sequence Information

Coding Sequence
aTGCTCCTATCCTGTTTTCTGTGTAACAGTAAGCTTGGTTTGATACGGAATACATCCAGCATATTTGGAGAACAGagCATTCTTCCTACAGGCATAAGTATATCGAATGTATTGAGTGAGATAGTAGAAAAGCCGTTGCTGGTCAATTGTGTACACTCATCCATTTTGTGCAAGAAATGTCACCAAACCTGTGCCGAGTACCATTCTATGCAGATAAGGCTAAAAtcaatgaaattacaaatgcAAGGCCAATTCAGAAAAACATTAGAAAGCTGTAAATTAAATCATGAAACTTATGAGAAGGACATGAGGGCGAAAACAATGGCGACGCAGACTGAAATGCCAGAAACCAAAATAGTCGGCAAGAGATTGGTGCTGCCAGCGTCAAAATTACAGCCCATATCGAAGGATATGCTGCTTAAAGTTGGCAAACTTGATGCTTTCTATAAAACCACCTTCATTCTACCAGGGCAAGCTAAACTCACTCCGCTACAATCAAAGAATCTAAAATCTCGCCTATCTCGCCTCGCTCAAAAAGCAACCGTGACCGAAGATGTTGCAGCAACCATAGAAAGCAAAACAGATGTAGAGGAGAGCATAGACAAGTACATAGTGACAGCGCCGTCTGTCAGTCAGAACAGCAGTTTACGTGATGCATTTCTAAAGGATTTCCTGCCTGGGCTGAATAAGTTTAATGTGAAGACTGAAGGTGTTGAAGACACAGACAGCCAACAAATGCAGATTGATGAAGataacAGTCTCCCAATGGTGCCTGTAGCAAATGAAAATGGCGATTTAATATTCCAAGTTGATGTTGGTAAGGAGGAGGATCAAAGGTCGGTGGGATCAAAGGATACGGACACAGAGTACCTGGAGTTGGATCAGGATATGAGTGTAGATGGGGACAAGCTGATCCTCAGCAAACTGCACTTGCTGCCCGGCTCTGGGGCAGACGGTGATACtcAGACGATAGTGTTTGACGGTGATAGTTCCATACTGCGCATGATGGCCGGCAGGAAGCTGATCTACGATGGCCACGAGATATCCCTCGTGATACCAGACTCCATGGACCAGACTGGTGATGGGCAAGACTCTAACGACGACGGTCAGATTGAGTTGCAAATGTCTGGAGACGAGGAGACTGCCAACGCTATCATTGCAGCCGCACAGGAACAAGGAGGTGCCTTTATAAAAGTGGAGTCAGGTGAAATGTACAGAGTTCAGTCGGTACAGAGTGCCGTGAGTACGGTGGGGACTGAAGATCTGGAGGATAGTGGTGGGGACTGGTCGGGGGACGGCGGGGGGCCGGGGGACAGTGGGGGACGAGGGGACAGTGGAGGACTAGGGGACGGCGGGGGGCCGGGGGACTCCGCCACAGCACACATCGTGCTGCAGGAGGGCAACAACTTCAAGTGTATGCTCTGCGAGAAACCTGACCGGACTGAGTCGCCGTCGGCTGCGTGCGTGGCGGACGCGGTCTCCATGATGCGGCACCTGAAGAGCGCGCACGACGCCCGCCTCTACATCTGCCAGCTGTGCCGCCTCGTGCTGCGCAAGAGGACCGAGTACTCGCAGCATATAGCCTCCCACGGCGGGTTGCTCCGGGAGCTTCGCCGCCCGCCCTCCGGGGCGAAGCCTTACGCCTGCGCGCTGTGCCACAAAACATTCGCCTCCAAGTACACACACCATGCTCATCTCAAGACCCACGCCGACCGTCCGCGGCCGTTCAAGTGTGACGAGTGCTCGAAAGCCTTCCTCACCCAGCAGAACCTTAATCAACACAAGAAGACGCATTCCGGGGTCAAGGATTTCATCTGCCCTATATGCAGCAAAGCGTTCGGCACGCAGCATAACCTGGAGGTGCACGGCGTGGTGCACTCGGGCGCGCGGCCCTTCGCCTGCCGCCTGCCGGGCTGCGGGAAGGGCTTCGCGCGCCGCGCGGAGCTGCGCGACCACGAGAGGATACACACAGGAGAGCGACCGTTCGCCTGCGACATCTGCGACGCGACATTCACCCAGCGATCGAACCTGCACTCTCACAAGCGAGCCACACATCTCGACGACAAGCGGTACCAATGCGACCAGTGCGACAAACGTTTCAAACGCAGAAGGCTTCTCCAGTACCACATAACATCGTCCCACACGGGCGAGCGTCCCCTCCAGTGCGGCGTCTGCGGCGCCAGCTTCGTCTATCCTGAACACTTCCGGAAGCACCAGCGGATACACAGCGGGGAGAGGCCCTACCACTGCGAGATCTGTGGCAAGTCGTTCAACTCCCGCGATAACCGCAACACTCACCGCTTCGTGCACAGCGACAAGAAACCGTACGAGTGCCTCATCTGCGGCGCCGGGTACATGCGCAAACAGCATCTCTACTCTCACATGCACACTAGCGGTCATCTAGCCGAGTCGATAGTGGTCAATCATCCGAGAGTCAACAAAGTTACAGATAATCAGGGTCCACAAATATTGAACGTACGGTCACTGGACACAGAAGGAGTCAAGGAAGAAACTaTTAAACAAACAGAAGAATTACAACTGATTAGTGGTGAAGGAAGGAATGAGGacAATATAGACGGTGACCGCTCGGACGCCACTATTCATGAAGAAGGGAATTTGTCGACGTTGGAGGTATTCTCTGAAGACAGTCAGATAGTGTCGGGCAACGACGGTGAAGTAATGCGCctcattcaaataaaactcCCCGATGGAAACAACAGGCTGTTCCGTCTACCGGAGGGAGTGGTCGGGGTCTCAGAGATATGA
Protein Sequence
MLLSCFLCNSKLGLIRNTSSIFGEQSILPTGISISNVLSEIVEKPLLVNCVHSSILCKKCHQTCAEYHSMQIRLKSMKLQMQGQFRKTLESCKLNHETYEKDMRAKTMATQTEMPETKIVGKRLVLPASKLQPISKDMLLKVGKLDAFYKTTFILPGQAKLTPLQSKNLKSRLSRLAQKATVTEDVAATIESKTDVEESIDKYIVTAPSVSQNSSLRDAFLKDFLPGLNKFNVKTEGVEDTDSQQMQIDEDNSLPMVPVANENGDLIFQVDVGKEEDQRSVGSKDTDTEYLELDQDMSVDGDKLILSKLHLLPGSGADGDTQTIVFDGDSSILRMMAGRKLIYDGHEISLVIPDSMDQTGDGQDSNDDGQIELQMSGDEETANAIIAAAQEQGGAFIKVESGEMYRVQSVQSAVSTVGTEDLEDSGGDWSGDGGGPGDSGGRGDSGGLGDGGGPGDSATAHIVLQEGNNFKCMLCEKPDRTESPSAACVADAVSMMRHLKSAHDARLYICQLCRLVLRKRTEYSQHIASHGGLLRELRRPPSGAKPYACALCHKTFASKYTHHAHLKTHADRPRPFKCDECSKAFLTQQNLNQHKKTHSGVKDFICPICSKAFGTQHNLEVHGVVHSGARPFACRLPGCGKGFARRAELRDHERIHTGERPFACDICDATFTQRSNLHSHKRATHLDDKRYQCDQCDKRFKRRRLLQYHITSSHTGERPLQCGVCGASFVYPEHFRKHQRIHSGERPYHCEICGKSFNSRDNRNTHRFVHSDKKPYECLICGAGYMRKQHLYSHMHTSGHLAESIVVNHPRVNKVTDNQGPQILNVRSLDTEGVKEETIKQTEELQLISGEGRNEDNIDGDRSDATIHEEGNLSTLEVFSEDSQIVSGNDGEVMRLIQIKLPDGNNRLFRLPEGVVGVSEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-