Basic Information

Insect: Falcaria lacertinaria
Gene Symbol: -
Assembly: GCA_951449985.1
Location: OX602119.1:1557873-1567608[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.24 17 6.5 2.2 5 23 389 408 386 408 0.93

2 10 2.8e-05 0.002 18.8 0.5 1 23 466 488 466 488 0.98

3 10 7e-07 5e-05 23.9 0.3 1 23 494 516 494 516 0.98

4 10 5.3e-06 0.00038 21.1 1.8 1 23 522 544 522 544 0.99

5 10 2.5e-06 0.00017 22.2 0.8 1 23 550 572 550 572 0.99

6 10 0.00013 0.0091 16.8 0.4 1 23 578 600 578 600 0.98

7 10 8.1e-05 0.0057 17.4 2.2 3 23 608 629 607 629 0.92

8 10 0.00013 0.0092 16.7 2.9 1 23 635 657 635 658 0.95

9 10 0.13 9 7.3 2.3 1 19 663 681 663 686 0.90

10 10 0.034 2.4 9.1 0.6 1 20 686 705 686 707 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.24	17	6.5	2.2	5	23	389	408	386	408	0.93
2	10	2.8e-05	0.002	18.8	0.5	1	23	466	488	466	488	0.98
3	10	7e-07	5e-05	23.9	0.3	1	23	494	516	494	516	0.98
4	10	5.3e-06	0.00038	21.1	1.8	1	23	522	544	522	544	0.99
5	10	2.5e-06	0.00017	22.2	0.8	1	23	550	572	550	572	0.99
6	10	0.00013	0.0091	16.8	0.4	1	23	578	600	578	600	0.98
7	10	8.1e-05	0.0057	17.4	2.2	3	23	608	629	607	629	0.92
8	10	0.00013	0.0092	16.7	2.9	1	23	635	657	635	658	0.95
9	10	0.13	9	7.3	2.3	1	19	663	681	663	686	0.90
10	10	0.034	2.4	9.1	0.6	1	20	686	705	686	707	0.93

Sequence Information

Coding Sequence: ATGGGTGATTTTAATGCACATCACATCCTGTGGGGCTCTAGTCACTCCGATCTATATGGTTTGTCCCTTTTGGACGTATTTAATGAAGTTGACCTCTGTGTTGCCAATGATGGATCCCCCACCCGTAGAGTATATCCTTCACAAAATCCGAAGAGCGCTGCAGACATCACACTATCCTCTCCACCAGTCTCCACCCTACTATCATGGAAAATACTTCCTCTCACATATGGCAGCGATCATTTCCCTATCATTATCTCCATCCCTAATAAAGTTGTTCCCCATTGCAATCCCAATCCTTCTCTAAAATACAAGCTATCTTCTGCAGATTGGACATCCTACTCTTCTTCTTTAGACCTCAAACTAGACTCTTCAACTATCTACCCCTTAGACATGGACCCCCTCACTTCCTATAACATATTCATTGAGAACATTACCTCTTCAGCTGCTCTTCACATCCCTCTCAAGAAGCTTACAAAAGATTTTAGAGTCTCAACCCCATGGTGGGATTCTGAATGCACAGTGGCAGTTCTGGAACGAAAAGAGGcagaacaaaattattacaccTCCATGTCTGATGcgaattttgtaaaatttcagCAATCAGCAGCTAAGGTCAGAAGACTAGCCTCTAAAAAGAAACGGCAAGGATGGATAACTGTTTGCGAAAGCCTTTCCCCAAGAACTCCATCTTCATTAGTCTGGAAACAGCTCAGACGATTTAGAGGTGCTTATAGTAGCGAAAACATATCATCTAATGACTCCTCCTCATGCCTAGATGCATTTTCTGACAAACTGGCGCCCCCTTCTGTTCCTACCGCAGATTCCATTCCCACACTCCCGTCTCCACTTCCATCCCAGAACTGGTTTGATCGTCCATTCTCACTTTCCGAACTAAACCTTGCACTCGACGGACTGACTGACTCTTCCCCTGGAATAGATAGCATCCCCTACTCTTTTATTGCGAAGTCTTCTGATAAAGccaaactaatttatttagacTTGATCAATCACTTCTTCCAATACGGTATAGTTCCTGATCAatggaaattacaaattattattccagCCATAAAACCCGGTAAGGATCCTTCAGATCCAAACAGTAGGAGACCAATAGCGATGTCATCGGTTTTGTTTGTCCATGAACCCTTTGCACATGTCTGCCATTGTGGGATTGGCTATTATACTAAGACTGATCTGAACTCCCACAAGAAACTAGTGCACCCAAATTATATAGAACCTGAGATTAAAGTGGAAAAAAGGGAAGTAATTAAGACAAAACTAGGTAAATTTAAGGTCAAAGCGAAATTTAAGGATAGAGAGAAGCCTAAAAGGGCTAAGAGAATCAACATACAACAGGATGATGTGTTAATAGAGCGTACAGATCAAAATAAGTTCATTTGTCCAATATGCAAGAAGGTTTTATGTAGTAAATCAGGTGTGTGGATACATATGCGGTCACACACTGGAGAGAAACCATATTCATGTGAACAGTGTGGCAAGGGATTCTCACAATCAGGTGCCTTGAAGGTGCATGTGAAAAGACATGCTGGGATAAAggaatttaaatgtaaatattgtaaaaaggaATTCTACGATAAAGGAGCTCTTGATTTACATTTGCGGACTCACACCAAGGAGAAGCCTTACAAATGTAAATACTGTGAAAAGCCTTTCGGTGATCCCTCTGCTCTGGGTCGCCATCACCGAATCCACACGGGCTACAAGCCCTATGAGTGCCCGCTGTGCCACAATAAGTACAGTGACGCCAGTGCCCTTATTGCTCACAAGCTACGACACTTGAATCACAGACCAGAGGAATGTATCATTTGCCACAAAAAGTTTACGAACAAAAATAATCTCCGCATCCATATAAAAGTGAACCACACAAATATTAAGGACCATAAATGCCTAGAATGTGACAGAACATTTGCTTTGAAATCCTATTTGAAAGTGCATATAGATTTGCATCATACACCAAAGAAGTACACCTGCTGTAATTGTAAGGAATCTCTTGATAACAAGTCGGCTCTGGTGCAGCATTGCAGCAGAGTTCACAATTGCATGCACTGTAAAGCTGGGTTCCCAAGTAATTCGCACGTGATAACACACATTTACGTTCCCGGTGGAAGGCCAACGCTGCGGCGACGCGTCGCGCCGGCCGCGCCGTTCAATACGCGCGGCGCGCGCGTACCGTGCGGCATCTGCCGGGAGTGA
Protein Sequence: MGDFNAHHILWGSSHSDLYGLSLLDVFNEVDLCVANDGSPTRRVYPSQNPKSAADITLSSPPVSTLLSWKILPLTYGSDHFPIIISIPNKVVPHCNPNPSLKYKLSSADWTSYSSSLDLKLDSSTIYPLDMDPLTSYNIFIENITSSAALHIPLKKLTKDFRVSTPWWDSECTVAVLERKEAEQNYYTSMSDANFVKFQQSAAKVRRLASKKKRQGWITVCESLSPRTPSSLVWKQLRRFRGAYSSENISSNDSSSCLDAFSDKLAPPSVPTADSIPTLPSPLPSQNWFDRPFSLSELNLALDGLTDSSPGIDSIPYSFIAKSSDKAKLIYLDLINHFFQYGIVPDQWKLQIIIPAIKPGKDPSDPNSRRPIAMSSVLFVHEPFAHVCHCGIGYYTKTDLNSHKKLVHPNYIEPEIKVEKREVIKTKLGKFKVKAKFKDREKPKRAKRINIQQDDVLIERTDQNKFICPICKKVLCSKSGVWIHMRSHTGEKPYSCEQCGKGFSQSGALKVHVKRHAGIKEFKCKYCKKEFYDKGALDLHLRTHTKEKPYKCKYCEKPFGDPSALGRHHRIHTGYKPYECPLCHNKYSDASALIAHKLRHLNHRPEECIICHKKFTNKNNLRIHIKVNHTNIKDHKCLECDRTFALKSYLKVHIDLHHTPKKYTCCNCKESLDNKSALVQHCSRVHNCMHCKAGFPSNSHVITHIYVPGGRPTLRRRVAPAAPFNTRGARVPCGICRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -