Basic Information

Insect: Falcaria lacertinaria
Gene Symbol: -
Assembly: GCA_951449985.1
Location: OX602120.1:8702776-8707059[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.1e-06 0.00022 21.9 1.7 1 23 206 228 206 228 0.98

2 9 3e-08 2.1e-06 28.2 1.6 3 23 236 256 234 256 0.98

3 9 0.0001 0.0071 17.1 0.3 1 23 262 284 262 284 0.98

4 9 1.1e-05 0.00076 20.1 1.7 1 23 290 312 290 312 0.99

5 9 2.2e-05 0.0016 19.2 1.7 2 23 483 504 482 504 0.96

6 9 2.9e-09 2e-07 31.4 1.6 1 23 510 532 510 532 0.98

7 9 0.0024 0.17 12.7 0.6 3 23 540 560 538 560 0.97

8 9 6.2e-05 0.0044 17.7 1.5 1 23 566 588 566 588 0.99

9 9 0.019 1.4 9.9 0.8 1 23 594 618 594 618 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.1e-06	0.00022	21.9	1.7	1	23	206	228	206	228	0.98
2	9	3e-08	2.1e-06	28.2	1.6	3	23	236	256	234	256	0.98
3	9	0.0001	0.0071	17.1	0.3	1	23	262	284	262	284	0.98
4	9	1.1e-05	0.00076	20.1	1.7	1	23	290	312	290	312	0.99
5	9	2.2e-05	0.0016	19.2	1.7	2	23	483	504	482	504	0.96
6	9	2.9e-09	2e-07	31.4	1.6	1	23	510	532	510	532	0.98
7	9	0.0024	0.17	12.7	0.6	3	23	540	560	538	560	0.97
8	9	6.2e-05	0.0044	17.7	1.5	1	23	566	588	566	588	0.99
9	9	0.019	1.4	9.9	0.8	1	23	594	618	594	618	0.95

Sequence Information

Coding Sequence: ATGACACCCCACATGTGGAataCGACAGCGCCGTACGTGCTCTACAAGGATGGCGTGGAGCGCGCGCCCCCTGGCACGCAGTGGGGCGGAGGGATGCTCGAGGGGGGCTACCAGCCCATGCAGCACCAGAGCCCCGGTGGTCCCTCGCCGCAGCCCGAGCCGCAGCTCGCCTCCCCCGCCCCGTCACCATACCCCCCCGCACCACCTCCGCCAGACTCCGCTCCAGAAGACCCCAACCAACACCTCGCTCAACAACAGGCCCAGCAACAAGTCCAACAACAGCAACAGACCTCTCCCGAACACATGCAAGTGGAACAACTGCAACAAACCCAGCAACCGCCCAACCAGGACCATCTCGACCGGGGCCCTTGTTTCGTGCCACAGCCTGACCTTCAGCAGCAATACACGCCGTATTTCAAAGAGACGAGGCCGACCAGCCACATGCTCGGCACTGGTGGCTTTCCCCTTCACTATCTAAAGCAGAACGGTGGAGTCCTGTCACTGGAAGGTCCACTCGACCAGTACGCGACGCCAGACTTGCGCCACTTGCCAGACATTGTGCAGCCCGAGCCACCGAAGCCGCGCAAACACAACCCTAACTCTGAGCTCCGCCTGTTCAAATGCCTGACGTGCGGGAAAGACTTCAAGCAGAAGTCGACGCTGCTGCAACACGAGCGCATCCACACTGACTCGCGGCCGTACGGGTGCCCGGAGTGCGGCAAGCGGTTCCGGCAGCAGTCCCACCTGACGCAGCATCTCCGCATCCACGCCAACGAGAAGCCGTACGCGTGCGTGTACTGCCCGCGCTCGTTCCGCCAGCGCGCGATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACCTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCTCTAaccggcgcgcgcgcggcgccCGTAGATCCCGCCGCTGccggcgccgcccgcgccgccgccgcccccgcccgTTCGACTCGGTCTCGCACACAATTGGCCCTCCTATCGGAAAAATTATCGGTGTCTTCGCCTCGGGGCGCTCGCGAGACGCGGAACCGACATCCGGACGCTCCCATGTATCGCCACACTTGATCTTCAAGAACGGTACGACGCCCACGCTGTGGCCGCAGGATGTGCCCTTCCCACCGGACGAGAACAAGGAGGAAATACAGTCCACTTTCGGTGACGCAGAGGGGCAAAACGGCGAGCAGCGCGGCTCGTGCTTCTCACCAGGAGACACGGCGCAGTATCCCGCCTACTTCAAGGACACCAAGGGACTCAACCACACGGTGTTCGGCTCCGGCCTCTCCCTGCAATACCTGAAGGGCAGTAAGCTGCCTGacgtgcttggcggcagagcCATGCCCCTCTACGTACGCTGCCCCATTTGCCAGAAGGAGTTCAAGCAGAAATCCACCCTACTCCAACACGGCTGCATCCACATAGAGTCGCGGCCCTACCCGTGCCCCGAGTGCGGCAAGCGGTTCCGGCAGCAGTCGCATCTCACGCAGCACCTCCGCATCCACACCAACGAGAAGCCGTACGGGTGCGTGTACTGCCCGCGCTTCTTCCGACAGCGGACTATCCTGAACCAGCACCTGCGCATCCACACGGGTGAGAAGCCGTACAAGTGCACGCAGTGCGGTAAAGACTTTCGGCAGAAAGCGATTCTGGATCAACACACGCGCACACACCAGGGCGACCGGCCGTTTTGCTGCCCGATGCCGAACTGCCGGCGGCGGTTCGCGACAGAGCCGGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCAGCGAAGGCGCGAAGGGCTGACGCCTCCAAAACGCCCCGGCCGCTGCCGCCCGCGTCCGCCGTGGTGAAGCCAGAGCTTTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTCGGGGGCGAGTTCAAGCCCGCCGTGGGCGCCTGCCTGCCCGCGCAGTGA
Protein Sequence: MTPHMWNTTAPYVLYKDGVERAPPGTQWGGGMLEGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDSAPEDPNQHLAQQQAQQQVQQQQQTSPEHMQVEQLQQTQQPPNQDHLDRGPCFVPQPDLQQQYTPYFKETRPTSHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYASNRRARGARRSRRCRRRPRRRRPRPFDSVSHTIGPPIGKIIGVFASGRSRDAEPTSGRSHVSPHLIFKNGTTPTLWPQDVPFPPDENKEEIQSTFGDAEGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFGSGLSLQYLKGSKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADASKTPRPLPPASAVVKPELYFPQCYAPPFQQFGGEFKPAVGACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_00468357;
80% Identity: -