Flac019924.2
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- -
- Assembly
- GCA_951449985.1
- Location
- OX602138.1:1810699-1824136[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0053 0.38 11.7 2.8 1 23 241 264 241 264 0.95 2 25 0.0077 0.54 11.2 0.9 2 23 290 312 289 312 0.95 3 25 0.15 11 7.1 1.1 1 23 334 356 334 356 0.98 4 25 0.26 18 6.4 1.9 1 23 360 382 360 382 0.79 5 25 1.1 77 4.4 1.0 1 23 386 409 386 409 0.90 6 25 0.076 5.4 8.0 3.6 2 23 416 438 415 438 0.97 7 25 0.0017 0.12 13.2 0.4 1 23 445 468 445 468 0.96 8 25 0.0018 0.12 13.2 4.6 1 23 474 496 474 496 0.97 9 25 3.2e-06 0.00022 21.8 2.6 1 23 502 524 502 524 0.98 10 25 0.54 38 5.4 0.7 1 23 570 592 570 592 0.94 11 25 0.45 32 5.6 0.1 2 23 621 643 620 643 0.93 12 25 0.032 2.2 9.2 0.8 2 23 664 686 663 686 0.94 13 25 0.00032 0.023 15.5 2.6 2 23 692 714 691 714 0.95 14 25 0.0091 0.64 10.9 1.5 1 23 719 742 719 742 0.96 15 25 1.2 82 4.3 0.4 2 23 745 767 744 767 0.93 16 25 0.0034 0.24 12.3 0.9 2 21 774 793 773 794 0.93 17 25 0.03 2.1 9.3 1.0 1 23 853 876 853 876 0.90 18 25 0.56 40 5.3 0.2 3 23 905 926 903 926 0.94 19 25 0.13 8.9 7.3 0.3 3 23 950 972 948 972 0.95 20 25 0.00075 0.053 14.3 0.6 3 20 979 996 977 1000 0.90 21 25 0.037 2.6 9.0 0.4 1 23 1005 1028 1005 1028 0.97 22 25 0.00066 0.046 14.5 0.2 2 23 1034 1056 1034 1056 0.92 23 25 0.00017 0.012 16.4 4.8 1 23 1060 1083 1060 1083 0.97 24 25 0.00024 0.017 15.9 0.6 2 23 1090 1111 1089 1111 0.96 25 25 0.0067 0.48 11.4 2.3 1 23 1117 1139 1117 1139 0.97
Sequence Information
- Coding Sequence
- ATGGAGTTTGACGCGCTTGTTGTGAAGGAGAGCCCTGGTTTATGCCGGTGTTGTCTCTCCGAGGGATGCTACAAAGATCTAGGGTCAGAATACCAATGGATGAACGACACTGAAGTTTACGCCGATATGTTATTCGAATGTTTTGATATAAGCATAACACAACACAATGATGGTCCCAATGGTCCCAACCGGCTCATCTGTGAGGTGTGCATCACACGCTTGCGAGATGCTTGCAACTTCAAGAAACAAGTCCTGGAGtctgaaaaaaaattcattGACATGATTGGCCGCAAGGAGTTCAAACCACAggTGCTGGTCTACCAGTCTCAGATAAAAGATGAGGACAAAATGGAGGATCTCTGTGAGGATGCAGAGGTGGAATATCTTGAAGATGACATACTACAATTTGGTGAAGaCGACCATAGAGATGCTACGGATTTGGAAGAACCATCAATGTCTGAAGATATAACAGTGACCACATTGCCGGTGAAAGGCAAGCGGGGAAGACCGAAGAAGAATGTCAAAGCTAAGACGGAGAAGGCCAAAGTTCCTCGCGTGGAGGAGAAGAAGCCGGCGAAAGTTAAAGGTGTCACACGCGCTAAAGAGGATAGGTTCGGATCCTCGATGAGTTCCACGAAACGCAACCGGCTCATGAAGAGGAACACTATCACATTACTAGAAACTACAACGGTGTTGCCATTCAAATGGCACAGACAAAACTATCTCTGTTTCTATTGCCATCTTCCTTTCAAAAGCACAGATACACTCAAAGAGCATACGATGAAAGAACATAAAGCGTCGAACATCAAAGCCGCTGTCTCTTACTTAAGACGTGATGAAAAAGTCAAAATTGACGTCTCTGCACTCAAATGTCTGCTCTGTGGTCGAGAGTTCGATGACCTTAGCTGTATGACTGATCATGTTAAGGTCACACATGATAGGATGTTTAACGAGGATTGTGGGTACGGGATTATTCCGTATAAGTTGAAGGAGGACGAGTTCCAATGCGCGGTTTGTATGCAAACCTTTCAATATTTCATCAAACTTAACCAGCATATGAATGAGCATTACGGAAACTATATGTGCGAACTGTGCGGCAAATCATTCCTCAGTCAGGATCGGTTGAGATGCCACAATTTGTCCCACGGTTCAGGGTTCAAATGCAACGTATGTTCGGACACTTTCGACTCGCTAACTCAAAAGAACAACCACGAATCCCAAATTCACAACAAGAATAAGTTGGTCAAATGTTTTTACTGTACGGAATCTTTTCAAAATTACGCCCAGAGGAAAACCCACCACAAAACGGCGCATAATATCAAAACGCACGAATATAAGTGCCCTGTCTGCGAGAAATCCTTCCAAATCATGAGCAAAATGAAGGTACACCTCAAAGAGGTCCACATACGGGAGAAGAACTTCTCTTGCTCGATGTGCGACCAGAGATTCTTCTCCAGGACCCACGTACAGAAGCATATGGTGAAACATTTCGGTGAAAGAGTCCATAGGTGTGACGTTTGCAACAAGTCGTATGCCCGGAAGCAGACTTTGAGAGATCATATGCGCATCCATAATAATGATAAGAGGTTTGTCTGTGTAAAACCGAAGAAATACACGGGGACTGAGTCGTCATCGATGCGCAGGCGAAAAAACCTACAGATTCTTTTCAACAACACTGCGATTATACCTTTTAAATGGCGCGGGAAGTATCTTTGCTTCTTCTGCAGCAAAGATATCCCGGAGTACGCAGAGTTGAGGAAACACACGAAATCTCACGGGAACTGCTCCACTAGGGATCATTCCCTAAAAGTTCTGAAAGGTGGTCAAAATATGGAGATCAAAATTGACGTGTCCGATATTAGTTGCGATCTATGCACAGAACCATTTCCCAATTTCAACGAAATTATCAACCATTTGTACGTGAAACATAAGCTGGAGTACGATAGAGGTGTCGAGATGCCAATTGAGGAGTACCGCCTTGTCGATCTAAGCTGCCTCGTGTGTCACGAAAAGTTTACCTATTTCGGATATTTAGTCTCTCACGTCAACAATGTCCACCCGAAGAAATGCTTGGTCTGCGACAAGTGTAACCAAAAGTTTAACAAGAAGAGGGATTTGTTCTCCCACATGAAGAATTATCACAGAGAAGGCGGTTACCAATGCGAATTTTGCCCGCAAAGCTTCAATTCTCTAAACATATTGAGGAAACACACGAATAATCGTCATCTGACCAGGTGTGGGATTTGCCACTTGAAGCTGCCTTCTGCGGTTTTGAAGCAGAAACATATGGACTTAGAGCATCCTGATGACGGGTCCTTAGAATGTGACAACTGCGATAAGGAATTCCATACAAAACAGGGCTTAAAAATGCACGAGAGGAAATGCAAGGGagatttattcagcttagcgATAAAGAATGAAGATTGCTGTCCGATGGACCTTGATGCAACCTACGATGATCTGGCGAAGAGGCCAAGCGTCAAACAGATCAGGGAAAATGTCGTTATAGTCATCAATATGTCCACAGCCATACCTTTCAACTTCTACAAgaacaaatttaattgtttctACTGCTCGAAAGACTTCCAGGATTCTGATTCCATGAGAGAGCATACGGTTCTGGAGCATCCTGTCTGCGATGTTAAACAAAAGTGCATTAGAAAGTGCAGGGAATCTGTGGCGTGTGTTAAGATTGACGTATCCTCCTTAGCGTGCAAGTTGTGCTTCGAATCGATGGCCGATTTGGATCATCTAATCGATCATTTGATATCGAAACACGAAGCGAGTTATGACAAATCGATAACCACGTGTTTGCAGCCTTATCGGCTGATCAAAGACCAAATGGCGTGCCCTAATTGCCCGAGTGAAGTGTTCCGTTTCTTCGGCACTTTGCTCAAACATATGAACAATAAACACaccaacaataatattatatgcgtATATTGCGGCCAGACTTTTAGACGGGACCAAAATTTGAGGGTCCATATATGGAGGCATCATAGGGATGGCCGATTCAAATGCAACTTGTGCGGCGCCGAATGTAATATTCCTTCTCGGCTATACATGCACATGGccaaagctcatggtgtgaaggCAGCCAAATGTCCCAAGTGCCCGGAATCCTTTGCCACCCAATATTTAAGGCAGAAACACCTAATAGACGCCCACGAGTCTGGTCACAAGTGCACTTATTGTGGCAAGTTGTTCACAAGAAACTCGTTTATGCGCGATCATGTCAGAAGAACCCATTTGAAGGAGAAGAATGTGGAATGTTCCATATGCAACATGAAGTTCTTCAACAATATTCTTCTCAGAAGGCACATGGTGAAGCATAGCGGCGAGAAGAACTTTCACTGTGACGTGTGTGGGGAAAGGTTCTTTTGGCGGAAGAGTTTAAGAACCCATATGGCCAGGCATAATAAGCATTTAACTCCTGCGCATCTTTAG
- Protein Sequence
- MEFDALVVKESPGLCRCCLSEGCYKDLGSEYQWMNDTEVYADMLFECFDISITQHNDGPNGPNRLICEVCITRLRDACNFKKQVLESEKKFIDMIGRKEFKPQVLVYQSQIKDEDKMEDLCEDAEVEYLEDDILQFGEDDHRDATDLEEPSMSEDITVTTLPVKGKRGRPKKNVKAKTEKAKVPRVEEKKPAKVKGVTRAKEDRFGSSMSSTKRNRLMKRNTITLLETTTVLPFKWHRQNYLCFYCHLPFKSTDTLKEHTMKEHKASNIKAAVSYLRRDEKVKIDVSALKCLLCGREFDDLSCMTDHVKVTHDRMFNEDCGYGIIPYKLKEDEFQCAVCMQTFQYFIKLNQHMNEHYGNYMCELCGKSFLSQDRLRCHNLSHGSGFKCNVCSDTFDSLTQKNNHESQIHNKNKLVKCFYCTESFQNYAQRKTHHKTAHNIKTHEYKCPVCEKSFQIMSKMKVHLKEVHIREKNFSCSMCDQRFFSRTHVQKHMVKHFGERVHRCDVCNKSYARKQTLRDHMRIHNNDKRFVCVKPKKYTGTESSSMRRRKNLQILFNNTAIIPFKWRGKYLCFFCSKDIPEYAELRKHTKSHGNCSTRDHSLKVLKGGQNMEIKIDVSDISCDLCTEPFPNFNEIINHLYVKHKLEYDRGVEMPIEEYRLVDLSCLVCHEKFTYFGYLVSHVNNVHPKKCLVCDKCNQKFNKKRDLFSHMKNYHREGGYQCEFCPQSFNSLNILRKHTNNRHLTRCGICHLKLPSAVLKQKHMDLEHPDDGSLECDNCDKEFHTKQGLKMHERKCKGDLFSLAIKNEDCCPMDLDATYDDLAKRPSVKQIRENVVIVINMSTAIPFNFYKNKFNCFYCSKDFQDSDSMREHTVLEHPVCDVKQKCIRKCRESVACVKIDVSSLACKLCFESMADLDHLIDHLISKHEASYDKSITTCLQPYRLIKDQMACPNCPSEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNLCGAECNIPSRLYMHMAKAHGVKAAKCPKCPESFATQYLRQKHLIDAHESGHKCTYCGKLFTRNSFMRDHVRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDVCGERFFWRKSLRTHMARHNKHLTPAHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090997;
- 90% Identity
- -
- 80% Identity
- -