Basic Information

Insect: Falcaria lacertinaria
Gene Symbol: -
Assembly: GCA_951449985.1
Location: OX602137.1:442979-448663[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3e-06 0.00021 21.9 0.5 1 23 200 223 200 223 0.97

2 14 1.2e-05 0.00082 20.0 0.6 1 23 229 252 229 252 0.95

3 14 2.9e-07 2e-05 25.1 0.7 1 23 258 280 258 280 0.99

4 14 0.00019 0.014 16.2 1.0 1 23 285 307 285 307 0.98

5 14 3.2e-05 0.0022 18.7 4.7 1 23 313 335 313 335 0.98

6 14 1.1e-06 7.8e-05 23.3 0.5 1 23 341 364 341 364 0.94

7 14 3.8e-05 0.0027 18.4 3.8 1 23 370 392 370 392 0.97

8 14 1.5e-05 0.0011 19.7 0.8 1 23 398 420 398 420 0.98

9 14 0.0018 0.13 13.1 1.2 1 23 426 448 426 448 0.98

10 14 2.2e-07 1.6e-05 25.4 0.9 1 23 454 476 454 476 0.98

11 14 1.8e-06 0.00013 22.6 3.5 1 23 482 504 482 504 0.98

12 14 0.064 4.5 8.3 2.9 1 23 510 529 510 529 0.95

13 14 4e-07 2.8e-05 24.7 0.3 1 23 535 557 535 557 0.99

14 14 0.00017 0.012 16.4 4.4 1 23 563 585 563 585 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3e-06	0.00021	21.9	0.5	1	23	200	223	200	223	0.97
2	14	1.2e-05	0.00082	20.0	0.6	1	23	229	252	229	252	0.95
3	14	2.9e-07	2e-05	25.1	0.7	1	23	258	280	258	280	0.99
4	14	0.00019	0.014	16.2	1.0	1	23	285	307	285	307	0.98
5	14	3.2e-05	0.0022	18.7	4.7	1	23	313	335	313	335	0.98
6	14	1.1e-06	7.8e-05	23.3	0.5	1	23	341	364	341	364	0.94
7	14	3.8e-05	0.0027	18.4	3.8	1	23	370	392	370	392	0.97
8	14	1.5e-05	0.0011	19.7	0.8	1	23	398	420	398	420	0.98
9	14	0.0018	0.13	13.1	1.2	1	23	426	448	426	448	0.98
10	14	2.2e-07	1.6e-05	25.4	0.9	1	23	454	476	454	476	0.98
11	14	1.8e-06	0.00013	22.6	3.5	1	23	482	504	482	504	0.98
12	14	0.064	4.5	8.3	2.9	1	23	510	529	510	529	0.95
13	14	4e-07	2.8e-05	24.7	0.3	1	23	535	557	535	557	0.99
14	14	0.00017	0.012	16.4	4.4	1	23	563	585	563	585	0.98

Sequence Information

Coding Sequence: ATGACTGACGCGTTAGTATCGGGCGGTTTGTGCCGCTGTTGCCATTCTGAAGGCAATTTTAAGAGTTTAGGAGTGAGTTACAGTTCCGATGCGAAAACTGAGATATTCTCCGTTATGCTACGGGAAAcctttagtatttttATAAGTCCCATACTAGGAGAGAATGCGGCCACCTTGTACAGCATATGCAACACTTGCGAGCCCCGACTGCGAGATGCTGCTCTCTTCAAACAACAGGTGCTGGAGTGTGAAGCTAAGATATTGGAATATTACGGCCAGCAGAGGGTGAAAGATGCTGTAGTATTTGAAGACTCCGTGAAGTTAGAACAGGACAGAGGGAATGAGGAAGATTTAAAGGATGAATCAGATGCGGACGACattgatttaatgaaatatgatGATGCTGCAGTATTTGAAGACTCCGTGAAGTTAGAGCAGGACAGAGGGAATGAGGAAGAAAAGCCATCAGTGGACATCTATATTGATCCCCTGGACTCGGCAGATGAGCTGCCGCTGTCGGCGTTGCGTAGTGGACCTTCGCCCTGGACTGCGGCACACGACgatgaaaataaaaccgtCAAACTCCCCACTAAAAAGTTCTCCTGCCAAGTATGCCCGAAAGAGTTTAAATACAACGGTTCCCTAGAAGTCCACATGATGAAGACACACAGCGGGGAGAAAACATACAAATGTAACATTTGCAACGACACATTCTCCAGCAACAAGGACTTGAACCGGCACATCGGCTCAGAACACGTCGTAGACGGCTGCTATCCGTGCAATAACTGCCAGAAGAACTTCGCAAGGCCTGTTTTACTCAAGAAACACCTAAGAACACACTACAAAGAGAAATTCCAGTGTTCAGATTGCCAAAAAGAGTTTCGCTGGAGAAAGGGATTGAATGAACACATAAAATCTCACAGCAAAGAGAAGAAATATACGTGCGAAGTGTGCCACAAGTCGTTTGGGCACAGTCAGACGTTGAAATCGCACATGTATATTCATACAGGTGAAAGACCGTATATTTGCGACGTTTGCGGACGGCGGTTCCCCCAAAGGACCCATTTGAAACGTCATATCGTGATCATACATGCCGGTTTGAAACCGCATAGGTGTACCACGTGTAACAAACAGTTTTCCAGTAAAAGTTATTTAGCTATCCACGAGAGACAGCATACGGGACTccggccgtattcttgtgaaGTCTGTAAGAAAGATTTCACGGCGTATACGACTTTGAAAGTGCACATGCGCGTCCATACTGGGTTAAAGCCGTACAGCTGTGGTTTCTGTAGTCGCCAGTTCGCTCAAATGGCGAGCTTTAAGCTCCACGAGCGAACACACACTGGAGAACGACCTTACAGTTGTAAAGTATGCAAAAAACCGTTTTCAGATAAcggttatttaaaaattcatatgCGATTGCATTCTGGCGAGAAGCCGTTCTCCTGTGAGATTTGTAAACGTTGTTTCAGAGAAACTGGACAGTTGAAAAGGCATATGCGCGTgcacagtggtataaaaccTTACACTTGTAAGatatgtaacaaacaaataggtaATTTATCGAAGCATATGCGTGTACATTCAGATGAGAGGCCTTATGTGTGTGAAATTTGCAATAAACAGTTCAGCATTAACGGTAATCTAAAGTTACACATGCGCGTCCATTCTGGGGAGAGGCCATTTAGTTGTGAATTGTGCAATAGTCAATTTACTCAGAGTAGCGGCTTGAAAAGGCATCGTTGTACGCACGGAAAGCATACATAA
Protein Sequence: MTDALVSGGLCRCCHSEGNFKSLGVSYSSDAKTEIFSVMLRETFSIFISPILGENAATLYSICNTCEPRLRDAALFKQQVLECEAKILEYYGQQRVKDAVVFEDSVKLEQDRGNEEDLKDESDADDIDLMKYDDAAVFEDSVKLEQDRGNEEEKPSVDIYIDPLDSADELPLSALRSGPSPWTAAHDDENKTVKLPTKKFSCQVCPKEFKYNGSLEVHMMKTHSGEKTYKCNICNDTFSSNKDLNRHIGSEHVVDGCYPCNNCQKNFARPVLLKKHLRTHYKEKFQCSDCQKEFRWRKGLNEHIKSHSKEKKYTCEVCHKSFGHSQTLKSHMYIHTGERPYICDVCGRRFPQRTHLKRHIVIIHAGLKPHRCTTCNKQFSSKSYLAIHERQHTGLRPYSCEVCKKDFTAYTTLKVHMRVHTGLKPYSCGFCSRQFAQMASFKLHERTHTGERPYSCKVCKKPFSDNGYLKIHMRLHSGEKPFSCEICKRCFRETGQLKRHMRVHSGIKPYTCKICNKQIGNLSKHMRVHSDERPYVCEICNKQFSINGNLKLHMRVHSGERPFSCELCNSQFTQSSGLKRHRCTHGKHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -