Flac006868.2
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- -
- Assembly
- GCA_951449985.1
- Location
- OX602116.1:2220295-2220687[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 0.00019 21.4 0.0 5 38 1 33 1 39 0.87 2 2 1.8 2.9e+03 -1.6 0.0 7 19 114 126 113 128 0.80
Sequence Information
- Coding Sequence
- ATGCAAAATGCTGTGAAAGAAGTAGGAAAGGGTATGAGCCAAAAGCTTGCCGCGAAGACCTTTCAAGTACCAAGAGCTACTTTGCTATTCAGGCTAAAACACCCGGAGCATAAATCTAAGCCAGGCCCTTCTACGGTTTTAACACCAGAAGAAGAGcaagtttttgtaaattggATTAAGATATGTAGTAGAAAAGGTTTCCCTATAAGGAAGGAAGACTTAATCAAAAGCGTTACTGATTTCCTGCAACAATCCAAGAGGCCTAGTTCTTTTAAAAACGGCAAGAAGTGGTTCAAACTGTTCTTAGCCAGACATCCTACACTTAATTTCCGAACTCCTGAAGCTGTTACAGCTGCCAGTTCTACGAAAATGAGCACAGATGAACACAGTTGA
- Protein Sequence
- MQNAVKEVGKGMSQKLAAKTFQVPRATLLFRLKHPEHKSKPGPSTVLTPEEEQVFVNWIKICSRKGFPIRKEDLIKSVTDFLQQSKRPSSFKNGKKWFKLFLARHPTLNFRTPEAVTAASSTKMSTDEHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -