Flac009339.1
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- -
- Assembly
- GCA_951449985.1
- Location
- OX602120.1:391498-400008[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-10 2.3e-07 30.8 0.0 4 39 174 210 172 214 0.90 2 4 1.9e-11 3.1e-08 33.5 0.2 2 39 226 263 225 266 0.93 3 4 3.6e-15 6e-12 45.4 0.1 4 45 283 325 280 325 0.95 4 4 1.4e-18 2.3e-15 56.4 0.0 1 45 332 377 332 377 0.96
Sequence Information
- Coding Sequence
- ATGACCGGCTACGGCCTGTCCCGTGTGAAGAACGAGCCGCAATCCGAAGAGGACGACAGTAACTCACACTTCGCCAGCTACTTATCTTCTCAGATACCCTCATCTGATCTTCACAACGTCAAACTAGAATCGGAGTGTAGGAGTGAGGGAAATGGACCGGTGCACATTCTGCAGCATTTACAAACGAGTGGCTTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGCCCGGCCGCCACGCCGGTCTGCGTGAAGCAGGAGCCGGCCGACATGCTGCCGCTCACCTTGGAGACTCTGCAATCCGCGCCGCACAGTCTTGCCGGCTCGACTCTGTTGGTCAGACACGCCATGATGTCTTCAGCCGAGCCTGATACGTCCGACTTCATGCCTCTGCTGGCTGTTAAAGATGAACCGATGTCTGAAGGAGAGCAACACCACCTGAGCAGCGACGAGGCGAGCGACTCGAGCAGCGCGGGGCTCTCCCCGCACGAGCGCGCCAGCCCCAAGTCCTGGAGCCAGCGCGACATGGACCACGCGCTCGACGCGCTGCGCACACGACACATGAGCCTCACCAAGGCATCGGCGACGTACGGTATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATCGCGACGCCCAAGCGggccggcgcggcgcgcggctgGCGCCCGCAGGACCTGCGCGCCGCGCTGCTGGCGCTGCGGGCCGGCGCGCTCTCCGCCAACAAGGCCAGCAAGGCTTAcgGTATCCCGAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGCCTGGCCGCGCCCTTCAACGCCGCGCCCACCGCCTGGCGCCGCTCCGACCTGCAGCTCGCGCTCGCCGCCATCCGCGCCGGGCACTCCTCCGTGCAGCGCGCCGCCTCGCAGTACGGCATCCCCACCGgCACACTATACGGGCGATGTAAGCGCGAGGGTATAGAACTGTCCCGCTCCAACCCCACTCCCTGGTCGGAGGACGCCATGGGGGAGGCACTGGAAGCCGTCAGAATCGGTCAGATGTCAATCAACCAAGCAGCTATCCACTATAACCTGCCGTACTCTTCGCTTTATGGACGCTTCAAGCGCTGCAAATACCAAACTCAGAACATGGCGCAAATCCCGCAGCAGGAGATACAGCAGACCTCAGAAATGGAGGTCCAAAGTCAGGATCTGGCTTGCTACCAGCAGATGACTCCTGTTGGGCATCCTCAAGAGGACCCTTCCTTCGCGGCCTATCACCAGCAGTACCTGGAGCAACCCTCCGGCGAGCTGCAGGAGTACTACAGCGCGGGCTTCAGCGGCCTGGCCACCAGCTGA
- Protein Sequence
- MTGYGLSRVKNEPQSEEDDSNSHFASYLSSQIPSSDLHNVKLESECRSEGNGPVHILQHLQTSGLEELAPLAPAGPAATPVCVKQEPADMLPLTLETLQSAPHSLAGSTLLVRHAMMSSAEPDTSDFMPLLAVKDEPMSEGEQHHLSSDEASDSSSAGLSPHERASPKSWSQRDMDHALDALRTRHMSLTKASATYGIPSTTLWQRAHRLGIATPKRAGAARGWRPQDLRAALLALRAGALSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRSDLQLALAAIRAGHSSVQRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQNMAQIPQQEIQQTSEMEVQSQDLACYQQMTPVGHPQEDPSFAAYHQQYLEQPSGELQEYYSAGFSGLATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -