Basic Information

Gene Symbol
ATFC
Assembly
GCA_951449985.1
Location
OX602120.1:5005956-5015400[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-11 2.1e-08 34.4 11.8 1 63 259 321 259 323 0.95

Sequence Information

Coding Sequence
AtgtgttgttataaatataatggaaTGTGTGACCTGTGTAGAGAGTTTCAGCTGTCCATCTTACAAAATCTGCTCAAGAACTTGCCATGCGCTGCACCGAAGAGTGAGTTCAGTACTTACCAAGACGACGGCACTTCCAGCCTCTACCCGCCGTCCCCGCTGGAGTCCAAGCCCAGCCGTGCTGAGCTCGCCAGTGATCTTCTGCAGCAGCTAGAAAATCAATGTAAACAAGaaaATATCTTCCCCAACTGGCTGGAGGAGAAGGTGGAGCTTCCCATCTTCGAGAGCATCCCTCATGCGGCGGAGCGCGTGGAGGTGCCGGCTGTGCCGGTAGTGCCGTTATTGCCGTTAGTGCCGGCAGTGGTAGCAGTGGGTGCGGGTGCGGGCGGGTCCACCGAGGAGCTGCTGCGCGAGTTTGAGACCGTCTACGGTGCCGTGGAGCTAACGCATCTGACGCCGCCGCAGAGCCCGCCCGGCCCGGCCACGCAGCTGCTGCTTAGCTACGCACAGGCGCAGGCGCAAGCGCAGGCGCAAGCACAGGCGCAGGCGACGCACGACGCCTGGCCTGCGCCCGCCGAGTACGAGCGCGAGCTGGCTGCTGTGGACGAGCTAGTGCGGCACCGCGCCGCACTGCTGCCCGAGCCCGAGCCCGAGCCCGAGCCCGCCTCGCCGCCCTCCTCCACCTTCTCCACCTCGCCGCCCTCTTCGCCGCGCTCTAGCTCCACGGACGAGGAGTGGGCATCCCCCTCGCGCCCGAAGCCCTATTCGCGCATGCCTGACGAGCGTCGCTCGCGCAAGAAGGAGCAGAACAAGAACGCTGCCACGCGCTATCGCCAGAAAAAGAAGGCGGAGATCGAGGTGTTGCTCAATGAAGAGCAGCAGCTGCGCCAGCGCCACTCAGAGCTGGGCGACAAGTGCTCCGACCTGCAGCGCGAGGTGCGCTACCTAAAGGGGCTCATGCGCGACTTGTTCAAGGCCAAGGGCCTCATCAAATAG
Protein Sequence
MCCYKYNGMCDLCREFQLSILQNLLKNLPCAAPKSEFSTYQDDGTSSLYPPSPLESKPSRAELASDLLQQLENQCKQENIFPNWLEEKVELPIFESIPHAAERVEVPAVPVVPLLPLVPAVVAVGAGAGGSTEELLREFETVYGAVELTHLTPPQSPPGPATQLLLSYAQAQAQAQAQAQAQATHDAWPAPAEYERELAAVDELVRHRAALLPEPEPEPEPASPPSSTFSTSPPSSPRSSSTDEEWASPSRPKPYSRMPDERRSRKKEQNKNAATRYRQKKKAEIEVLLNEEQQLRQRHSELGDKCSDLQREVRYLKGLMRDLFKAKGLIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00467947;
90% Identity
-
80% Identity
-