Basic Information

Insect: Fabriciana adippe
Gene Symbol: -
Assembly: GCA_905404265.1
Location: FR989995.1:3710669-3720601[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5 4.5e+02 2.2 0.1 3 23 117 137 115 137 0.94

2 18 0.0083 0.76 10.9 0.0 2 23 141 163 140 163 0.95

3 18 0.056 5.1 8.3 0.6 2 23 394 416 393 416 0.97

4 18 0.024 2.2 9.4 0.1 1 21 424 444 424 445 0.94

5 18 0.011 1 10.5 0.6 2 23 455 476 454 476 0.94

6 18 1.9 1.7e+02 3.5 0.6 1 23 492 515 492 515 0.84

7 18 0.091 8.3 7.6 1.4 1 23 524 547 524 547 0.93

8 18 0.41 38 5.6 1.4 3 23 623 644 621 644 0.91

9 18 1.8 1.6e+02 3.5 0.8 1 23 649 672 649 672 0.89

10 18 4.2e-05 0.0038 18.1 1.2 1 23 678 700 678 700 0.97

11 18 1.7e-06 0.00015 22.5 1.1 1 23 707 729 707 729 0.98

12 18 7.6e-05 0.0069 17.3 2.3 1 23 734 756 734 756 0.96

13 18 0.00041 0.037 15.0 2.6 1 23 762 784 762 784 0.99

14 18 1.6e-06 0.00014 22.6 1.4 1 23 790 812 790 812 0.98

15 18 7.3e-05 0.0066 17.4 1.5 3 23 820 840 819 840 0.98

16 18 0.00052 0.048 14.7 0.4 2 23 848 870 847 870 0.97

17 18 0.0021 0.19 12.8 0.3 1 23 875 897 875 897 0.98

18 18 0.19 18 6.6 4.0 1 23 903 926 903 926 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5	4.5e+02	2.2	0.1	3	23	117	137	115	137	0.94
2	18	0.0083	0.76	10.9	0.0	2	23	141	163	140	163	0.95
3	18	0.056	5.1	8.3	0.6	2	23	394	416	393	416	0.97
4	18	0.024	2.2	9.4	0.1	1	21	424	444	424	445	0.94
5	18	0.011	1	10.5	0.6	2	23	455	476	454	476	0.94
6	18	1.9	1.7e+02	3.5	0.6	1	23	492	515	492	515	0.84
7	18	0.091	8.3	7.6	1.4	1	23	524	547	524	547	0.93
8	18	0.41	38	5.6	1.4	3	23	623	644	621	644	0.91
9	18	1.8	1.6e+02	3.5	0.8	1	23	649	672	649	672	0.89
10	18	4.2e-05	0.0038	18.1	1.2	1	23	678	700	678	700	0.97
11	18	1.7e-06	0.00015	22.5	1.1	1	23	707	729	707	729	0.98
12	18	7.6e-05	0.0069	17.3	2.3	1	23	734	756	734	756	0.96
13	18	0.00041	0.037	15.0	2.6	1	23	762	784	762	784	0.99
14	18	1.6e-06	0.00014	22.6	1.4	1	23	790	812	790	812	0.98
15	18	7.3e-05	0.0066	17.4	1.5	3	23	820	840	819	840	0.98
16	18	0.00052	0.048	14.7	0.4	2	23	848	870	847	870	0.97
17	18	0.0021	0.19	12.8	0.3	1	23	875	897	875	897	0.98
18	18	0.19	18	6.6	4.0	1	23	903	926	903	926	0.97

Sequence Information

Coding Sequence: ATGGCTTCTGACGAGTCAGATGATGAACCTCTATCTAATTTGGCGGCTGCCAAGAAAAAAGACCCCGATAATTTTGATTATGAACCACCAAGTGAGAGTAGTGATGAGGAACCAAAGAAGAAAAAGAAGAAAGAACCACCGGCAAAAAAATTAGGCGTGACTATAAAATTTCATCGAAAATTAAACAATCTGATAGGACCTGGGGTAATAGAAAGACCAGCGGATGTGTGGCTTTATTTAAAGGATCTTAACCCAACAGGGCCTTATAGTTGTTTATTGTGTTCAGATTGGTTTATAAATAGATCAAAAATGATATTACATTATGCATTAAATCATAAGAAAGATTTTTGTGGTATTTGCAGATACTTTGTACCGGACAGAGATGCTTGGTGGGAACATGAAAAATTTCATTCACCATGGCCTTGTTCCCAATGTGTGGAGACATTCCCATCAGAAGTCTTGCTACGTAATCACCTTAGTAGTGTTCATAATTTAGTGCATTGCAGACTCTGCCATTTTAGAGTCACTGCAGATGAAAATTACAGTTCACATTTGTTTCAAAAGCACAATGTAACCAATGCTTCTTGTCAAAATGATGATCAATTTTGGCATTTAGATTATGATGGAGATGAAAAATTTATGTGTTCTCTGTGCTCAAAAACAGACTTATTGTCTTCCACATTTTTTGGACATTTCATGGGCTATCATCATTTTACTCTAAAATGTTTAACCAACCTAATTGCCGGAAAAAGCACTCCATTTACAGTAGATGGTGCTGATGTTACTGACCGTTTTATTAATGAACAACTAAAAGGACATGTAAGGCTTGGTTATGTTGATTTAACACCTAAGAGTGAACCACCTCCTGGAAATGTAAAGGTTGTACCTGTTGAAATTGTAATGCCTAGTGTTAAAAAAGAGGTTCCGAGTGATGCTGAAGAACAAAATAAAGCAGTTAGAGCAGAGATAGTAGCAAAAGATGAGAACAGTCAAGGTACTGAAGTATTAGATTATAAAGGCGAAGAAGATTTTGATGTTACAGTGACAGAAATGATTATTATTGAAAGATCCTATTTTGACTATATAAATCAGCTCCTTTCTAGTGTTAGTGAAGATAAAGTACCTGAAATATCTCATATTGAGTATGATAAGCTTAAATCAGATTATCTAAACAATGTAAAATGTCCACTATGTAAAACTAAATTGGAAACAGTACAGTCGTTTGCAACACATATGAACAAAATGCACAGTGTCAAATCAGTGCCTTTGTATTCCTGTCGGGTTTGTGCAGCAACTTTTGATACTTATAATGATTTAACAAATCATATTACCAGTGAGTTGGCTGATTTTGATGACCTATGGATATGTCAGTTTTGTGACAAAGAATTTGATAACCGTGAGTCAACTAGACAGCATTTAACAGAACACTACAACTGTTTAGACTATGAAAATTGTTTTAGTCCACATGTAGGGTTCAAATGCAAGTACTGTTCAACATTGTTCTGGAATGAGCCAGACAGGGAAACGCATCAGATAAGAGTGCATTACAATAAATACAAGGAATATTTTTATAAATGTGAACCCTGTTCTAAAACTTTTGGTGATAAGGTATGGTACTTACATCACTACATAGAGAAGCATTGTGAAGACGAAGACAAGGCATATCTCGTCAAGTGTTGTCTTTGCTGCATAGTTCTATCAGATGTGGACGAGATGAGGAGTCACTTTGCATCAAACCACCCAGAGGTCCGCAAGTTATATTGTTCTCTGGAACCATGCCTGTATAAGCCTTTGAGTCATAGGAAATCGTTTAAACTTCATGTGAAGATGATCCACGGTACTCCCAAGCCAGAGAAGACGGTCCATTGCAACGTGTGCCAGCGAGAGTTTGCCAGCTCACGCGCGTGCGCGACCCACATGGCGCAGGTGCACGGACCCGGCAAGTTCAAGTGTAAACTGTGTAAAGAAGTGTTGCAAACTATTGATGAGAGAAAGCTCCATTATCTCCTCCGCCATCCCGGACGTCATCCCTTCGAGTGTGTAGACTGCGGGAAGTCCTTCCAGTACAAGTCGTCGCTATACATGCACAGACAGGACCACCAGCCGAACAAACAGACATACACGTGCAGTTATTGTGGGAAATCTTTTGCGAAGAAGGATTCGTACCGCGAGCACGTTCAGATACACGAGGGTCCGCGCCATGCTTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACCGGCGAGCGCCCCTACCGCTGCGCGCACTGCCCGCGCTCCTTCGCCGACAAGGGCGCCTGCACCGCACATACCAGAACACATTCCAAAGACACGTCCTACGCGTGTCTGTACTGCGGGCAGACGTTCGTGCAGAAGTCCAAATTGACATATCATATACGCAAACACACAGGAGAGAATCTAGAAGCGTGTCCAGTGTGTTCCAAGCTGTTCACGAGCGCGTGCTCGTTGCGCGAGCATATGAAGACGCACGTGGAGAAGCGAGCAGTTGTTAAATGTCCGCTGTGTGATAAAGGCTACCAGGACGAGCGCTACATGTTGCGGCACCTGCGCACGTCGCACACGCGCTCGCAGTTTAGCTGCCCGCTCTGCCAGAAGCTGCTGACGAGCGCGGCGGGGCTGAGACACCATGTCATTACCCATAGCCCGCTCAATACTTTTAGATGCAAATGCTGTCCCAAATCATATGCAGTTAAGCGAACTATTGTTAAACATCTGAGGAAACGTCATGGCTTGAAAGGGGGTGAATTAAACCTAAAAGATTTCTACACTCGGTTAGAGCCCAGAGAATGCCAGTTGGACTTAGACGAAGCTACGATGACCACTATATTCGGACCCCCCAAGAAAACGATGCCAGAAGTACTGATCGCTGACTTTGTAACATTCTCTAAGAAGATTACGTTTGCACAGAATGTGGAGAATAATAATACTGATGACACTGAAGAAGATAATGATGCAGCCAAAGAAAGTGATAATGTCAGTAACAGTGAGCAAGAAGAGCAGCCACCTCCACAGATAAAACAAGAAGTTGTCAGTGGAGGTGAAGAGGAACTAGAACCAACAGACTTTGTCAGTGTCAAAATAGAACCCGTGGAAGATGAGAATATGGAATAA
Protein Sequence: MASDESDDEPLSNLAAAKKKDPDNFDYEPPSESSDEEPKKKKKKEPPAKKLGVTIKFHRKLNNLIGPGVIERPADVWLYLKDLNPTGPYSCLLCSDWFINRSKMILHYALNHKKDFCGICRYFVPDRDAWWEHEKFHSPWPCSQCVETFPSEVLLRNHLSSVHNLVHCRLCHFRVTADENYSSHLFQKHNVTNASCQNDDQFWHLDYDGDEKFMCSLCSKTDLLSSTFFGHFMGYHHFTLKCLTNLIAGKSTPFTVDGADVTDRFINEQLKGHVRLGYVDLTPKSEPPPGNVKVVPVEIVMPSVKKEVPSDAEEQNKAVRAEIVAKDENSQGTEVLDYKGEEDFDVTVTEMIIIERSYFDYINQLLSSVSEDKVPEISHIEYDKLKSDYLNNVKCPLCKTKLETVQSFATHMNKMHSVKSVPLYSCRVCAATFDTYNDLTNHITSELADFDDLWICQFCDKEFDNRESTRQHLTEHYNCLDYENCFSPHVGFKCKYCSTLFWNEPDRETHQIRVHYNKYKEYFYKCEPCSKTFGDKVWYLHHYIEKHCEDEDKAYLVKCCLCCIVLSDVDEMRSHFASNHPEVRKLYCSLEPCLYKPLSHRKSFKLHVKMIHGTPKPEKTVHCNVCQREFASSRACATHMAQVHGPGKFKCKLCKEVLQTIDERKLHYLLRHPGRHPFECVDCGKSFQYKSSLYMHRQDHQPNKQTYTCSYCGKSFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCAHCPRSFADKGACTAHTRTHSKDTSYACLYCGQTFVQKSKLTYHIRKHTGENLEACPVCSKLFTSACSLREHMKTHVEKRAVVKCPLCDKGYQDERYMLRHLRTSHTRSQFSCPLCQKLLTSAAGLRHHVITHSPLNTFRCKCCPKSYAVKRTIVKHLRKRHGLKGGELNLKDFYTRLEPRECQLDLDEATMTTIFGPPKKTMPEVLIADFVTFSKKITFAQNVENNNTDDTEEDNDAAKESDNVSNSEQEEQPPPQIKQEVVSGGEEELEPTDFVSVKIEPVEDENME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00248386;
90% Identity: iTF_00160123;
80% Identity: -