Fadi018528.1
Basic Information
- Insect
- Fabriciana adippe
- Gene Symbol
- zfy1
- Assembly
- GCA_905404265.1
- Location
- FR990009.1:9668981-9683592[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.49 45 5.3 0.1 1 23 187 209 187 209 0.96 2 12 0.012 1.1 10.4 1.0 1 23 216 238 216 238 0.97 3 12 0.21 19 6.5 0.0 1 23 242 265 242 265 0.97 4 12 8.7e-06 0.00079 20.3 2.1 1 23 270 293 270 293 0.93 5 12 0.0012 0.11 13.6 0.6 2 23 300 321 299 321 0.97 6 12 5.6e-06 0.00051 20.9 1.4 3 23 335 355 334 355 0.97 7 12 0.041 3.8 8.7 0.2 3 16 363 376 362 377 0.90 8 12 0.00043 0.039 14.9 0.7 2 23 412 434 411 434 0.96 9 12 0.023 2.1 9.5 0.7 1 23 441 464 441 464 0.94 10 12 0.021 1.9 9.7 0.1 6 23 474 492 473 492 0.92 11 12 2.2e-06 0.0002 22.2 1.2 2 23 502 523 501 523 0.96 12 12 5.4e-05 0.0049 17.8 1.4 1 23 528 551 528 551 0.96
Sequence Information
- Coding Sequence
- ATGAGTATGGAGGCTTTAGTTCAAATAAAAGTTGAGCCAGAAGATCCAGGTTTTGAGGTGGAAGTGAACTTTAAAGTGGAATCAGATGAAGAACCCCATAATAATGATGAAGATGCTTCGTATAATTTTGTGGGAATAAAGCAGGAGCTACCAGACCATATAGATGTCAAAATAGAACCTGAAGATGATTATGAAACTCCCTATGAGCATAATGAACATCATGAACATATATTACCTGATATATCTATGGAAATTGGGCAGCCTACATATTATGACCATTCTAAAGATGGTGGGGCCTTACCTTTACTTACCGCAAGAACTAGAAATAGGGAGAGAAATAAAGATGATGACTCTGACGATGAATATCTGCCTTCAAAAACTAAAAAGAAGAAAAAAGAGCCTAATGTGAAACCTATATTCAAGGGAAAACCTAAATGTGGACCCGATGATCAAAAATATTCAGATGAGATAACGAAGCACATAGAGATAGTGACTATAGATGAACCGGCGCGCCTGTTGGAACATCACGCGTTGTTCAGCAGCAGGCGGCACATGAACTACACGTGCGAGCCCTGCGCCCTGGGGTTTGTGGTCGAGGAGGCCTACCACATGCACATGAGGATCCACTCGCCTGAGAACGGCGACCATCAATGCGACATATGCCAGGCTCGCGTGAAGACGGCCGATGTACTGTACCGCCACAAGTTACGCCATTACCGCCGGTATCGCTGCGCCATCTGCCTGCTGCAGCTGCGGGACAAGGACACGGTGGCGGCGCACGTCATGCGCGAGCACCTCGGCGCCGCCTTCATCTGTACGCACTGTGGGAGAGATTTTAAGCGTCCCCAGTATCTGAAAAGGCATGTGGAGCAAATGCACACCCGCCCCCTGCACCTGGAGTGTCCGGTGTGCGGCCGGGTGTTCTACGAGAGGGGGTGGTTTAGGTGTCATGTTAGGACTCACAACGAGGAGGTGCGCAAGAACATCGACCGCAAGGCGATCTGCTCGGAGTGCGGGCGCGAGTTCCGCAACAAGGCGTACCTGGTGCGGCACCTGCACACGCACGAGGACCGGCGCCGCGCCGCCTGCCCGCACTGCCAGCGCGCCTTCAAGAACGCGGAGGATTTTTTTTTCAGAAATGAAGACGGCACCATTGTACCGAATCTCACAGGGCGCAGCTACGCTGGTCCATTGCGGGAGAGGGGATTGTCCGCCAGTGCGCAGTGCAACACGACGTGCCTGCAGTGCGGGCGCGTGCTGACCACGCGCGCCATGCTCATGCGCCACACGCAGCGCATGCACACCGACCACACGCGCAAATTCCAATGCGACTACTGCAAGAAGTGGTACTTCACGAAGGCGGAGGTGCGGTCGCACATCGAGTGGACGCACCTGCAGCAGCGGCGCCACGCCTGCGCCTGCGGCCGCGTGTTCCGCACGCCGGCCCGCCTGCGCGCGCACGCCTGCGCCGCGCACCTGCGCATCCCGCCGCCGCGCGATAAGAGCTGCCCCGTCTGCGGGAAGTGCTTCGCGAATCGTCAAGTGCTCACCCGTCACATCCGAGGCCACTCCGGAGAGACCTACCCTTGTATGGAATGCGGGCAAAAGTTCAAAACTCAATCCTACGTGAAAGTTCACTACAAACTAAAACATCTCAACATGACCCGTGCTGAGATAAAAGCCCAAACAAAAAGAAAATTAATAATGGTGAATAATGTCGACGAAATAATGAATGCGAAAGTCAAAAACGCAGTAACCAATATCACCGGTGAAGACCCCTTGAATATAGGGAATGAGGGGTTAATAGAAGTAAAGAAGGAGCCAGATTTGGAAGTGCCCTCCTTCGAAACGTTTCTAGGGATACCGCGCGAGTATTGA
- Protein Sequence
- MSMEALVQIKVEPEDPGFEVEVNFKVESDEEPHNNDEDASYNFVGIKQELPDHIDVKIEPEDDYETPYEHNEHHEHILPDISMEIGQPTYYDHSKDGGALPLLTARTRNRERNKDDDSDDEYLPSKTKKKKKEPNVKPIFKGKPKCGPDDQKYSDEITKHIEIVTIDEPARLLEHHALFSSRRHMNYTCEPCALGFVVEEAYHMHMRIHSPENGDHQCDICQARVKTADVLYRHKLRHYRRYRCAICLLQLRDKDTVAAHVMREHLGAAFICTHCGRDFKRPQYLKRHVEQMHTRPLHLECPVCGRVFYERGWFRCHVRTHNEEVRKNIDRKAICSECGREFRNKAYLVRHLHTHEDRRRAACPHCQRAFKNAEDFFFRNEDGTIVPNLTGRSYAGPLRERGLSASAQCNTTCLQCGRVLTTRAMLMRHTQRMHTDHTRKFQCDYCKKWYFTKAEVRSHIEWTHLQQRRHACACGRVFRTPARLRAHACAAHLRIPPPRDKSCPVCGKCFANRQVLTRHIRGHSGETYPCMECGQKFKTQSYVKVHYKLKHLNMTRAEIKAQTKRKLIMVNNVDEIMNAKVKNAVTNITGEDPLNIGNEGLIEVKKEPDLEVPSFETFLGIPREY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212814;
- 90% Identity
- -
- 80% Identity
- -