Basic Information

Insect: Fabriciana adippe
Gene Symbol: -
Assembly: GCA_905404265.1
Location: FR989983.1:24447389-24449308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0091 0.83 10.8 1.7 1 23 64 86 64 86 0.96

2 16 0.12 11 7.3 0.0 2 23 115 137 114 137 0.94

3 16 0.038 3.4 8.8 0.4 2 23 158 180 157 180 0.93

4 16 0.00038 0.035 15.1 2.1 2 23 186 208 185 208 0.95

5 16 0.0019 0.17 12.9 0.9 1 23 213 236 213 236 0.93

6 16 0.071 6.5 8.0 0.5 2 23 239 261 238 261 0.95

7 16 0.0041 0.37 11.9 1.6 2 22 268 288 267 288 0.94

8 16 0.0023 0.21 12.7 0.4 1 23 346 369 346 369 0.92

9 16 0.092 8.4 7.6 0.1 3 23 398 419 396 419 0.94

10 16 0.057 5.2 8.3 0.3 3 23 443 465 441 465 0.95

11 16 0.00034 0.031 15.3 0.6 3 20 472 489 470 493 0.90

12 16 0.0055 0.5 11.5 0.4 1 23 498 521 498 521 0.97

13 16 0.00023 0.021 15.8 0.2 2 23 527 549 527 549 0.94

14 16 2.5e-05 0.0023 18.8 4.7 1 23 553 576 553 576 0.97

15 16 0.00011 0.0099 16.8 0.6 2 23 583 604 582 604 0.96

16 16 0.00074 0.068 14.2 2.1 1 23 610 632 610 632 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0091	0.83	10.8	1.7	1	23	64	86	64	86	0.96
2	16	0.12	11	7.3	0.0	2	23	115	137	114	137	0.94
3	16	0.038	3.4	8.8	0.4	2	23	158	180	157	180	0.93
4	16	0.00038	0.035	15.1	2.1	2	23	186	208	185	208	0.95
5	16	0.0019	0.17	12.9	0.9	1	23	213	236	213	236	0.93
6	16	0.071	6.5	8.0	0.5	2	23	239	261	238	261	0.95
7	16	0.0041	0.37	11.9	1.6	2	22	268	288	267	288	0.94
8	16	0.0023	0.21	12.7	0.4	1	23	346	369	346	369	0.92
9	16	0.092	8.4	7.6	0.1	3	23	398	419	396	419	0.94
10	16	0.057	5.2	8.3	0.3	3	23	443	465	441	465	0.95
11	16	0.00034	0.031	15.3	0.6	3	20	472	489	470	493	0.90
12	16	0.0055	0.5	11.5	0.4	1	23	498	521	498	521	0.97
13	16	0.00023	0.021	15.8	0.2	2	23	527	549	527	549	0.94
14	16	2.5e-05	0.0023	18.8	4.7	1	23	553	576	553	576	0.97
15	16	0.00011	0.0099	16.8	0.6	2	23	583	604	582	604	0.96
16	16	0.00074	0.068	14.2	2.1	1	23	610	632	610	632	0.97

Sequence Information

Coding Sequence: ATGTCAAATTCAAAAGATTTTATTTTATTTTTTTTAATAATAAAGGGTACATTTACAGTTGAGGATTTCTTTTCAGATATAAAACCTCGGAAAATGAAAGGCTGCGAATCGTCTTCGATGCGTAGAAGGAAAAACCTTCAACTACTCTTCAATAACACGACCGTCATACCGTTTAAATGGAGAGGAAAATATCTATGTTTCTATTGTAGCAAAGACATTTCGGAGTATTCCGAACTCAGAAAACATACCAAGTCTCATGGTAATTGTTCTACAAAAGACCATTCCTTGAAAGTTTTAAAGGGTGGACAGAATATGGAAATAAAAATCGATATTTCAGAAATTTCTTGTGAGATTTGTAACGAAGACTTTCCCGTTTTTGACGATGTTTTGTCACATTTATTGGTCAAACATAAGTTGGAGTTTGATAGGGAAGTAGATATGGCTATAGAAGAGTATCGGTTGGTCGATCTAAGTTGCCTTCTATGCCAGGAAAAGTTCACGTATTTCGGTTATTTAGTATCGCACGTGAATAATAACCACCCAAAGAATTGTCTGATTTGTGACAAATGTAATCAGAAATTCAATAAGAAGCGAGATCTTTTCTCGCATATCAAAAATTATCACAGAGAGGGTGGCTATCAGTGTGACGTGTGCCCTCAAAGTTTTAGTTCTCTAAATATATTAAGAAAACACAAAAGCAATCGTCATTTGACTAGATGTAATATATGTCACTTGCGACTGCCTTCTGCGGTCCTCAAACAAAAACATATGGAGATAGAGCATCCCGATGATGGGTCTCTCCAATGCGATATATGCTATAAAGATTTTCATACAAAACAAGGGCTAAAAATGCATACGCGCAAATGTAAAGGCGATATATTCGATGTAACGATTAAAAACGAGGAATTCGAAGTAATGGATTTAGATAGCAACTATGAGAGTGTTAAACGACCAAGTGTCAAACAAATTCGGGAAAATATCGTGATCGTGATAAATATGTCTACCGCGATACCGTTTAATTTTTACAAAAATAAATTTAACTGCTTCTACTGCTCTAAAGATTTCCCGGACTCTGATTCGATGAGAGAGCACACTGTCATAGAACACCCTGTATGCGATGTAAAAGAGAAGTGCATCAGAAAGTGCCGAGAATCGGTTGCATGCGTGAAAATCGATATTTCGTCGCTAGCTTGTAAAATTTGCTTTGAATCGATGAACGATCTCGATAATCTTTTAGACCATCTCATTATAAAGCACAACGCGAATTACGATAAATCGATCACAACGTGTCTACAACCCTACAAATTGATAAAAGATCACATGGCATGTCCGAACTGTCCTAGCGAAGTGTTTCGCTTTTTTGGTACTCTATTGAAACATATGAATAATAAACATACCAATAATAATATAATCTGTGTCTACTGTGGTCAAACTTTTAGACGTGATCAGAATCTACGTGTCCATATATGGAGACACCATAGGGATGGTAGGTTCAAATGTAACATTTGTGGAGCAGAGTGTAATATACCATCGAGATTGTATATGCACATGGCGAAAGCTCATGGTGTCAAAGCAGCGAAATGTCCAAAATGTCCAGAAAGTTTTGCCACACAGTATCTGAGACAAAAACATCTGATAGAAGCTCACGATTCAGGCCACAAATGTTCGTATTGTGGGAAACTTTTCACTCGAAATTCCTTTATGCGAGATCATATAAGACGTACGCATTTGAAGGAAAAGAACGTTGAATGTTCCATATGTAATATGAAGTTTTTCAATAATATCCTCCTGAGGAGGCACATGGTGAAACATAGTGGGGAGAAAAATTTTCACTGTGACATCTGTGGTGAGAGGTTTTATTGGAGGAAAAGTTTGCGAACTCATATGGCTAGGCATAGTAAACTAATAAATACTATTTAG
Protein Sequence: MSNSKDFILFFLIIKGTFTVEDFFSDIKPRKMKGCESSSMRRRKNLQLLFNNTTVIPFKWRGKYLCFYCSKDISEYSELRKHTKSHGNCSTKDHSLKVLKGGQNMEIKIDISEISCEICNEDFPVFDDVLSHLLVKHKLEFDREVDMAIEEYRLVDLSCLLCQEKFTYFGYLVSHVNNNHPKNCLICDKCNQKFNKKRDLFSHIKNYHREGGYQCDVCPQSFSSLNILRKHKSNRHLTRCNICHLRLPSAVLKQKHMEIEHPDDGSLQCDICYKDFHTKQGLKMHTRKCKGDIFDVTIKNEEFEVMDLDSNYESVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDSMREHTVIEHPVCDVKEKCIRKCRESVACVKIDISSLACKICFESMNDLDNLLDHLIIKHNANYDKSITTCLQPYKLIKDHMACPNCPSEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMAKAHGVKAAKCPKCPESFATQYLRQKHLIEAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDICGERFYWRKSLRTHMARHSKLINTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00621427;
90% Identity: iTF_00897141;
80% Identity: -