Basic Information

Insect: Fabriciana adippe
Gene Symbol: -
Assembly: GCA_905404265.1
Location: FR989982.1:21644673-21659584[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.6 3.3e+02 2.6 0.2 3 17 60 74 58 75 0.87

2 14 0.0025 0.23 12.5 0.0 2 19 186 203 185 204 0.95

3 14 0.00017 0.015 16.2 2.3 1 23 247 269 247 269 0.97

4 14 3.5 3.2e+02 2.6 2.8 2 21 276 295 275 296 0.91

5 14 0.077 7.1 7.8 0.9 3 23 346 367 345 367 0.91

6 14 0.0065 0.6 11.2 0.2 2 20 373 391 372 393 0.91

7 14 0.00013 0.012 16.6 0.5 1 23 401 424 401 424 0.96

8 14 3.5e-05 0.0032 18.4 3.0 1 23 443 465 443 465 0.97

9 14 3e-07 2.7e-05 24.9 3.7 1 23 472 494 472 494 0.98

10 14 1e-07 9.1e-06 26.4 2.3 3 23 511 531 509 531 0.96

11 14 2.3e-05 0.0021 18.9 3.2 1 23 537 559 537 559 0.99

12 14 4.2e-07 3.8e-05 24.4 1.5 2 23 566 587 565 587 0.96

13 14 4.2e-07 3.8e-05 24.4 1.4 1 23 593 615 593 615 0.99

14 14 0.0085 0.78 10.9 0.4 1 23 621 643 621 643 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.6	3.3e+02	2.6	0.2	3	17	60	74	58	75	0.87
2	14	0.0025	0.23	12.5	0.0	2	19	186	203	185	204	0.95
3	14	0.00017	0.015	16.2	2.3	1	23	247	269	247	269	0.97
4	14	3.5	3.2e+02	2.6	2.8	2	21	276	295	275	296	0.91
5	14	0.077	7.1	7.8	0.9	3	23	346	367	345	367	0.91
6	14	0.0065	0.6	11.2	0.2	2	20	373	391	372	393	0.91
7	14	0.00013	0.012	16.6	0.5	1	23	401	424	401	424	0.96
8	14	3.5e-05	0.0032	18.4	3.0	1	23	443	465	443	465	0.97
9	14	3e-07	2.7e-05	24.9	3.7	1	23	472	494	472	494	0.98
10	14	1e-07	9.1e-06	26.4	2.3	3	23	511	531	509	531	0.96
11	14	2.3e-05	0.0021	18.9	3.2	1	23	537	559	537	559	0.99
12	14	4.2e-07	3.8e-05	24.4	1.5	2	23	566	587	565	587	0.96
13	14	4.2e-07	3.8e-05	24.4	1.4	1	23	593	615	593	615	0.99
14	14	0.0085	0.78	10.9	0.4	1	23	621	643	621	643	0.98

Sequence Information

Coding Sequence: ATGGCCTTACACACGACAAATGTGAAAATAGAAAATTTATGCCGTACTTGTTTATCTAAAGAGTTTAAAATGCTATCGGTGTTTGAAGTGCGTTTAGGAATGGATACATTAGACAATATAATTGCATCAATAACTGGTGTAAAGATAGAGCAAGGAGATGGGTTACCTTCTACAATATGCAATGATTGTAAAGAGAAAGTTGTTAGTGCATATGATTTTAAAACTCGTTCACAAGAAGCTGAAGTCACATTAAGAGGTCTACTAACTAGAGACCTTAGTAATGAAAATAATTTAATATATGAGCCTGACGCTGTTGCAGTAAAAACAGAAAATTTTGTTAGAGACAATCATGATGTTTATATGGATTTGGATTTATCATTAGCTCTGGGCAATGTTCAAGAAAGTTATAGTGATGTAGATGCTGTGAAATGTGAAGAAGCAGGAACACAGTGTAAAGAGTCTTATGTTGATTCTGAGGAACATGAAAATACAAATGGTAAAAATGAAAGCATAAAACAATCATCAAAAGCAGAAAATAAAGAATCTGACAGTACATATTGCCCTGTCTGCGGATCAAGTTTTGCTGATGCTGAAGGCCTTACAAAACATGCTTGGGAACGGCATGCAGATCTCATGGGACCCAAGAAGAGGGGTCGACCAAAAAAATTACTTACCAGTACGATTCTAAACAAATTATCTGAAAATGGCTATAATTTGAAATATTTGCCAGACTTGAAACACAAATGTATGTTTTGTAAGGAAAATTTCAAAAACAAAGATGATTTGATATTACATATGTTAGAACATAAAGATGTGAAATTGCTCAGTTGCTTAAATTGTAAGAAGATGTATCTTAAGAAAAATGACTTGGAAAATCATCACTGTGTACGATCTAGAAATGATTTGGATCACAGCAAGCAGGAGGAGCCACCAGATGCCCAAGAAAATGGCATAGATATCAATTTTTATAAGGAAACATTACTTCAGGATGTAATAATGGCTAATGGTGATATGGATCCTGGAAATATAGAGCCATGCAGTGAATGTGGTGAAGTATTCATGTGTAGTACAGACTTGAGTAAACATCGGGATCAAGATCACCCAGAACTTTCTTCACGATGTCACCTATGTGATAAGGTTTTCGCAACAGTAAAAAGCGCAGCTCGTCACCGTGCGATATGTTCTCGAGTTGAGCGTTCATTCGCCTGTACCTCGTGTGGACTTCGCTTCGCTCACGAGGTGTCTCTTAATAAGCACATACTGAGAGCGCACGCGGGGCAGAGCGTGTCTGTCCGTTTCATGGACAGGGATAGGGCACCGCCTCAACATAGATGTGACACGTGTAACCGAAGATTTTACAGAAAGGACTTGCTGGCGAGACATGCGAAAATACACAAGCAAATTGAAAAATGTTTCGAATGTGATGTTTGCAACAAAAAGTTTCATAGAAGGGATAACCTGAAGACACACATGAGAGTCCACAACGGTACCGGCGAGAGCGGTGGCAATTCAAGCACGAACACCTGTCTGTGCCTGTACTGCGGTCGAAGCTTCTCGAACTCTTCCAACTTAATAGTTCACATGCGACGTCACACCGGCGAGAAACCTTACAAATGCGACTTTTGCGGGAAAGGTTTTCCGCGATCATCCGATTTGCAGTGCCATCGACGATCGCACACGGGAGAAAAGCCTTGTATATGCGGGGTCTGTGGCAAAGCGTTTTCACGAAGTAACAAGCTGTCACGTCACATGCGTGTTCACACTGGCGTGAAACCGTACAAGTGTTCGTACTGCGAGAAGGCATTCTCCCAAAGCAACGACCTAACCCTTCACGTGCGGCGGCACACTGGCGACAAACCGTACGTGTGCGAGCTGTGTGGAGACCGCTTTATACAGGGCACAGCTCTGCACAACCACAGGCGCGCGCACGGCCACTATCCCCCGGCGCCGCTCGTGTACACCGTGCAGACCCTCGCGCAGACACACTGA
Protein Sequence: MALHTTNVKIENLCRTCLSKEFKMLSVFEVRLGMDTLDNIIASITGVKIEQGDGLPSTICNDCKEKVVSAYDFKTRSQEAEVTLRGLLTRDLSNENNLIYEPDAVAVKTENFVRDNHDVYMDLDLSLALGNVQESYSDVDAVKCEEAGTQCKESYVDSEEHENTNGKNESIKQSSKAENKESDSTYCPVCGSSFADAEGLTKHAWERHADLMGPKKRGRPKKLLTSTILNKLSENGYNLKYLPDLKHKCMFCKENFKNKDDLILHMLEHKDVKLLSCLNCKKMYLKKNDLENHHCVRSRNDLDHSKQEEPPDAQENGIDINFYKETLLQDVIMANGDMDPGNIEPCSECGEVFMCSTDLSKHRDQDHPELSSRCHLCDKVFATVKSAARHRAICSRVERSFACTSCGLRFAHEVSLNKHILRAHAGQSVSVRFMDRDRAPPQHRCDTCNRRFYRKDLLARHAKIHKQIEKCFECDVCNKKFHRRDNLKTHMRVHNGTGESGGNSSTNTCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICGVCGKAFSRSNKLSRHMRVHTGVKPYKCSYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQGTALHNHRRAHGHYPPAPLVYTVQTLAQTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00212792;
90% Identity: iTF_00248318;
80% Identity: -