Fadi012404.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Fabriciana adippe
Gene Symbol
-
Assembly
GCA_905404265.1
Location
FR989983.1:24365848-24369816[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 5.8 5.2e+02 2.0 0.1 3 23 62 83 60 83 0.90
2 28 5.6e-05 0.0051 17.7 1.3 2 23 153 174 152 174 0.97
3 28 0.00049 0.044 14.8 0.0 1 23 178 200 178 200 0.98
4 28 0.00047 0.042 14.8 1.2 1 23 205 228 205 228 0.97
5 28 3.2 2.9e+02 2.8 0.8 2 23 236 258 236 258 0.90
6 28 3.8e-06 0.00034 21.4 1.7 2 23 266 288 265 288 0.96
7 28 4.4e-05 0.004 18.1 0.7 1 23 294 316 294 316 0.98
8 28 9.3e-06 0.00084 20.2 3.0 1 23 322 344 322 344 0.98
9 28 0.0031 0.28 12.3 0.8 1 23 439 462 439 462 0.90
10 28 0.041 3.7 8.7 0.1 2 23 489 511 488 511 0.97
11 28 0.92 84 4.5 2.4 2 23 534 555 533 555 0.96
12 28 0.35 32 5.8 1.9 5 23 562 580 556 580 0.92
13 28 0.0049 0.45 11.6 1.1 1 23 585 608 585 608 0.94
14 28 0.19 17 6.6 0.2 2 23 616 638 616 638 0.95
15 28 0.00017 0.015 16.2 6.5 2 23 646 667 646 668 0.95
16 28 0.0021 0.19 12.8 1.7 1 23 674 696 674 696 0.98
17 28 4.2e-05 0.0038 18.1 4.2 1 23 702 724 702 724 0.99
18 28 2.6e-05 0.0024 18.8 5.1 1 23 730 753 730 753 0.98
19 28 0.024 2.1 9.5 1.2 1 23 809 832 809 832 0.93
20 28 0.039 3.6 8.8 0.2 2 23 859 881 858 881 0.95
21 28 6.4 5.8e+02 1.8 2.0 2 23 904 925 903 925 0.94
22 28 1.7 1.5e+02 3.6 0.3 1 19 929 947 929 951 0.86
23 28 0.18 17 6.7 1.7 1 19 956 974 956 976 0.87
24 28 0.12 11 7.3 0.9 2 23 987 1009 986 1009 0.92
25 28 0.0085 0.77 10.9 1.7 2 23 1017 1039 1016 1039 0.95
26 28 0.00011 0.0097 16.8 1.5 1 23 1045 1067 1045 1067 0.97
27 28 8.6e-06 0.00079 20.3 2.4 1 23 1073 1095 1073 1095 0.98
28 28 0.00017 0.016 16.2 4.4 1 23 1101 1124 1101 1124 0.97

Sequence Information

Coding Sequence
ATGCTTCAAGACCTACAACAAACCAATGATAATACATTTAAGAAGAAACAAAGAAGAACTAAAACAAGTATAGATAATGATAAATGTATGCAAGAAGTAGAAAAACATAGAAATAATATGCTTGAAATATTACTCCATTCCAATGCTACGCCAATTCGTTTCAAAGGAGATATAGGCTACGGTTGCTCTTTTTGTTCCGACCAATACCCAAAACCTGCTGACTTAAAGAGCCATACAATAGAAGTTCATGACGACGATAGTATTAAAAAAGTTATTGCAGATATGCGAATTTACACAGTGAAATTAGACGTAACAGCTTTACACTGTGCGCTTTGCTCAACAGATATACCAACTATAGAAGAACTCATGGACCACCTAATCAACGACCATGAGCGTGTTATATACACAGATATTAAAAATCATATGGTGCCATTTAAGTTTGACGATGATCAACTGAAATGTGCTATATGTTCTGAGAAATTTTCCAAATTTAGAAATTTGACAGAACATATGAATACACATTTTAGAAATTATGTGTGTGACGTGTGCGGCGCGGGATTTGTGAATCGGGATATTCTCAGAAGTCATTTAAGGATTCATAAGACAGGCGATTTCACTTGCGATTTTTGTCCAAAAACATTCAACACTCGAGTCAAGAAACAGTCCCATATAAACATTGTCCACAAACGATTGTACATGACGAGGAAGTGTGGGTACTGTAATGAACTGTTCGATGATTATAATAAGAAAAATGATCATTTAGTAAAATTTCATGGTGTCAATCTCGTTATCCTCAAATGTGAACTTTGTGATAAGACGTTCATCAATCAAAATCAGTTTAGGCGGCACGTTAGAAAGGATCATCTGATGGAGAGGAATTACGAATGTGTAGTGTGCGATATGAAGTTCTTTAGTAATGAGAATTTGCGAAAACATGTGCTAAAACACACGGGAGAAAGAGACTTTCATTGCAGCGTATGTGCAAAGTCATTTGCACGCAAATTTACCTTACAACAGCATATGCGAGTGCACTCTAAGGAACGTAAAACTTCTAGGACATCGCCGGATCGATACTTGGTCATAAGTGAATCGGATGACGTCGGTGAACCGACCGAAAGTGATAATAAAAAGAATAGAAAAAGAAGGATAAAAACCGAATCTGAAAACGTAGTTAGAAAGAAAGCTAAAATAACGATAAAAACTAAAAAGATTAAGCTTAAGCCTATAAAGGAATTGACAAAACATCATCACAATATAAAAGAGGTTCTCCAATGTTCTAACACTACACCGATCCATGGTAAAAGTGACCTCGGCTACCTGTGCTGCTATTGCACACAACAATTTCCAGATCCTGCAGATTTAAAAAAACATACAATTGATGTGCACAGAGATGCGCCTAAACCTACTTTCTTCCAAAAAAGGGATCTGCAAAAATTTTACGTCAAAGTCGACATAACTGGATTACAATGTAATATATGCAGAACAAATATCGATGATTTGGACAAATTGATCGATCATTTAAAAACTGAGCACGACAGAAAAATTTATACGGATGTAAAGAACCATATGGTTCCATTCAAGTTTGATAGTGAAGAACTAAAATGTTTTGTTTGTGCAAACGTGTACACTAAGTTCAAGATGCTGCTAGAGCATATGCATAAGCATTGTAGGAATTTTATATGTGAATGTGGTGCCGGATTTTTCAATCGTAGATCGTATTTGAATCATCAAAAATCTCATGTTGTTGGTGAATTTAAGTGTGATCAATGTGATAAAATTTTTGATAATGCTCAAAAAAAGAATCAGCACTTTCGAGCTGTTCATATACACGCATATAAGCTGAATAGATGTGGTTATTGCAATGAAAAATTTGCCGGTTATCGAACGAAAGCAGAACATCTTAGAATTGTTCACGGGGTAGGATGTGAAACAGCTCAATGCCAAGCGTGCGAAAAGAGTTTTTGTAACAAAGACTCCTTAAGGAAACATATAAAACGTCATCATTTGATGGAAAACCAACATCGCTGCACTCTGTGCGAAATGACATTTTTTGCTAAGAAAAATTTGGCAGAGCACATGGTTACTCATACTAAAACTCGTAGTTTTCAATGTAAAGTTTGTTTTAAGAGATACGGGCGGCAGCACACGTTGCGAGAACATATGCGTATTCATAATAATGATAGGCGTTTCAAGTGTGAACATTGTGGGATGGCGTTTGTGCAAAAGTGTAGTTGGCGACGTCATATGCAAACTAAACATGATGAGCCAAGTTTGCGAAGATGTCAAATTGATAGAAACGAAGATTTTATATGGGCAGAGCCGCCATTAAAAAAGGGTGAAGAATTGGAAAAACATAGGATCAACATGAGAGAGATATTATTGAACTCTAATGCAACGCCAATACGGTGTCGTGGCGTTTTCGGCTACAATTGTTGCTTTTGTACTCAACAATTCCCAGAGCCTGCAGATTTAAAAAAGCATACCCTGGAAATTCATGACGAGAAAACTAAAACTAATTTCATGAAAGGCAAAGACTTATTCAAATTCCACGCCAAGCTAGATATAACTGATCTTAAATGCAATTTATGCAACTCAAGTATTAATACATTGGAAGAGTTAGTGCGGCATCTTAAAGAAGAACATAAAAAGACTGTGTTCACTGACATCAAGAACCAAATACTACCATTTAAATTTGACAACGAAAGGCTTAGATGTTTCATATGCATGAACGTGTACCATAAATTTAAATCTCTACTAGAACATATGAATGTGCATTACAGAAATTACATTTGTGAAGTGTGTAATGCTGGTTTCGTCAATCGCGCAATTCTCGCTCAACACTCCAAATGTCATAAACTTGGCTCTTTCAGCTGTGATTATTGCCCAAAAATTTTCGACACGTTTAGAAAAAAGCGGTCCCATGAAAAGTGCGTCCATACACATTCGACTACTTTAAATAAATGCGGCTACTGCTACGAAAAGTTTCGAGATTACAGAAAAAAAGAACGGCATTTGGCTGAAGTTCATGGTATCGTCGCTCAAGCGCTGAAGTGTCTAGTTTGCGACAAAACTTTCGCAAACCAAAAGGATCATACAATACATGTAAAAAGATTACATTTGATGGATAGAAGGCATAAATGTCCCCAATGTGATATGAGTTTTTTCTCGTCTCCTGAATTAAAAAATCACCTTGTTAAGCATACAGGTCTGAAGACCTTCGAATGTGAGATATGCCACAAGACGTACGGTCGTAAGAAAACGTTAACTGAACACTTGCGTATACATGCAGATGATAGGCGGTTCAAATGTGAGCACTGTGGTCAGACGTTCGTACAGAAGTGCAGCTGGCGAGGTCACATGCGAGCGAAGCATGGGGAAACAGTGTAG
Protein Sequence
MLQDLQQTNDNTFKKKQRRTKTSIDNDKCMQEVEKHRNNMLEILLHSNATPIRFKGDIGYGCSFCSDQYPKPADLKSHTIEVHDDDSIKKVIADMRIYTVKLDVTALHCALCSTDIPTIEELMDHLINDHERVIYTDIKNHMVPFKFDDDQLKCAICSEKFSKFRNLTEHMNTHFRNYVCDVCGAGFVNRDILRSHLRIHKTGDFTCDFCPKTFNTRVKKQSHINIVHKRLYMTRKCGYCNELFDDYNKKNDHLVKFHGVNLVILKCELCDKTFINQNQFRRHVRKDHLMERNYECVVCDMKFFSNENLRKHVLKHTGERDFHCSVCAKSFARKFTLQQHMRVHSKERKTSRTSPDRYLVISESDDVGEPTESDNKKNRKRRIKTESENVVRKKAKITIKTKKIKLKPIKELTKHHHNIKEVLQCSNTTPIHGKSDLGYLCCYCTQQFPDPADLKKHTIDVHRDAPKPTFFQKRDLQKFYVKVDITGLQCNICRTNIDDLDKLIDHLKTEHDRKIYTDVKNHMVPFKFDSEELKCFVCANVYTKFKMLLEHMHKHCRNFICECGAGFFNRRSYLNHQKSHVVGEFKCDQCDKIFDNAQKKNQHFRAVHIHAYKLNRCGYCNEKFAGYRTKAEHLRIVHGVGCETAQCQACEKSFCNKDSLRKHIKRHHLMENQHRCTLCEMTFFAKKNLAEHMVTHTKTRSFQCKVCFKRYGRQHTLREHMRIHNNDRRFKCEHCGMAFVQKCSWRRHMQTKHDEPSLRRCQIDRNEDFIWAEPPLKKGEELEKHRINMREILLNSNATPIRCRGVFGYNCCFCTQQFPEPADLKKHTLEIHDEKTKTNFMKGKDLFKFHAKLDITDLKCNLCNSSINTLEELVRHLKEEHKKTVFTDIKNQILPFKFDNERLRCFICMNVYHKFKSLLEHMNVHYRNYICEVCNAGFVNRAILAQHSKCHKLGSFSCDYCPKIFDTFRKKRSHEKCVHTHSTTLNKCGYCYEKFRDYRKKERHLAEVHGIVAQALKCLVCDKTFANQKDHTIHVKRLHLMDRRHKCPQCDMSFFSSPELKNHLVKHTGLKTFECEICHKTYGRKKTLTEHLRIHADDRRFKCEHCGQTFVQKCSWRGHMRAKHGETV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-