Fadi023832.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Fabriciana adippe
Gene Symbol
-
Assembly
GCA_905404265.1
Location
FR990000.1:14373201-14378650[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.13 11 7.2 2.1 1 23 199 221 199 221 0.96
2 26 0.36 33 5.8 0.2 6 23 233 251 233 251 0.95
3 26 0.41 38 5.6 0.1 3 23 262 283 260 283 0.93
4 26 2.5e-07 2.2e-05 25.1 0.3 2 23 308 329 308 329 0.97
5 26 0.00014 0.013 16.5 1.8 1 23 336 359 336 359 0.96
6 26 0.0016 0.15 13.1 0.1 1 23 365 387 365 387 0.98
7 26 0.018 1.7 9.8 4.1 1 23 393 415 393 415 0.97
8 26 0.00021 0.019 15.9 5.6 1 23 421 443 421 443 0.98
9 26 0.037 3.4 8.9 3.5 1 23 568 590 568 590 0.96
10 26 0.0002 0.018 16.0 2.1 2 23 597 619 596 619 0.92
11 26 1.7e-06 0.00016 22.5 2.0 1 23 625 647 625 647 0.98
12 26 1.1e-06 0.0001 23.1 4.2 1 23 653 675 653 675 0.99
13 26 0.00024 0.022 15.8 2.7 1 23 681 703 681 703 0.96
14 26 1e-05 0.00093 20.1 4.8 1 23 709 731 709 731 0.97
15 26 0.024 2.2 9.4 4.6 1 23 737 760 737 760 0.90
16 26 0.61 55 5.0 0.6 2 23 824 844 824 844 0.95
17 26 3e-05 0.0027 18.6 0.9 1 23 850 873 850 873 0.95
18 26 4.4e-05 0.004 18.1 8.1 1 23 879 901 879 901 0.96
19 26 0.00031 0.028 15.4 0.0 1 23 907 929 907 929 0.96
20 26 0.00025 0.022 15.7 0.9 1 23 935 957 935 957 0.98
21 26 0.0019 0.18 12.9 1.9 5 23 966 984 963 984 0.95
22 26 0.14 12 7.1 0.2 2 19 1127 1144 1126 1147 0.90
23 26 0.062 5.6 8.2 2.9 1 23 1152 1174 1152 1174 0.98
24 26 0.0045 0.41 11.7 5.3 1 23 1180 1202 1180 1202 0.98
25 26 0.0006 0.055 14.5 2.2 1 23 1208 1230 1208 1230 0.98
26 26 0.0012 0.11 13.5 3.6 1 23 1235 1258 1235 1258 0.97

Sequence Information

Coding Sequence
ATGAAAACTGCTAAACAGTTACTTTTTACATTTAAGTGTCTGGATATAGATGAAATGGACCCGCTACCAAAAACAGTGTGCTATAGCTGTGCTCGACTTATTGTAACATGGCACAAGTTTGCAAACCGCAGTGTAGAAGTTGAAGCAAAATTAAAACAAAGATGCAACCTACAAGGACAACCTATGGAAACAAATGAACAAAATGCAACAAATTTAAATGAAAACGGCAACAATCAAGCTGTCGATACCTATACATATACTGCAGATTCTTCAATTGGCACGTCACCAGACCCATATTCCCTTTACTCCATTGTAAAAAACGTGTTGACTGACGATTACTTTAAGACTTTGGACATTGACGAGGATAACTCCAATTTAGAGTACGTCTGCCAAATATGTCCCGGCAACCCGGCCTCGAAGTCTGTCGAACTTTTGTGCTCTCATATAAAGTCTTCACATTACTCCAAAACTACTGACCAACAGGCCATAGAAGATTATATAAAGGAGAACATAACGTTTGAAGAAGTCCTCGGTGATGACATGGATGATGATCATGAACTTGAACAAGTAAAAGATGTGATAGAATTGCCTAATTTCTTTTGTCCTTTTTGTGACAATGCGTTTTCATCGCCAACTCGTCTTATATGTCACTTAAACAAACATATTGAAGTTAGTATCGAAGACGGAATTACGTGTTGTGATAAACACTATCCGGATAAGAAAACCTTTGTCGCCCATTTGCAAGAAGCACACGTAAATAGACAAGTGACTGGAAAGGTAATATGCAAAAGCTGTGATTTCACAGCCAAAGACGTCAATGAACTACAATCACACATAATCCAAGCTCATCCAGAAAGCAAAGACGATTGCTACAAACCGAAGAAAGACCCGAGTCCAAAAAATCAGAAGTTCATACCAGCAGTCTGTCCCGAATGCGATAAAGTTTTCTCTAATAAATATAACATGCTCGTTCACATGAGAAATCATAATAAATCAACCACCAAGTTCGCGTGCGTCAAGTGTAGTAAGAGTTACAAAAGCCAAGGGAGCTTGTCTCATCATCAGAAGGTGGCTCATGAAGGGTTACTTCGGTTTCCTTGTGCGTACTGCGGGGAAGCGTTTCCTTCCAGGATGACTAGGAACATTCACACTCGCATTCACACCGGGTGTAAGCCATTCTCTTGCAAGTATTGCTGCAAGAGTTTCAGAGCAAAAAACAGCCTGGACCGGCACATCGACATGCACTTAGATATACGAAAATACGCTTGCCAATTTTGTCCGAAGAAATTTAGAAAACGCACGCACCTCAATTATCATTTAAAGACGCACGAGGACCAAAGTTACGGAGACGCTTGTGAGGAAAAAAATATTTGGAAAATTGCCGAATCTGATAGCGACTCTATCGCTTCAGACGATGAACCTCTCGCGAGCTTGGCAAATAGAAAGTCTACTCGGGACTTGTATCAAGACTTCTATAATGCTTTGAAAAAGTTTCGGGACCACTTCGTGAGTGACTACCGCTGGCAATGTAATTATTCCGACTTCTCCGACTCGACTGAATCCGACCATGAAGACTTAAAGGAGATGGATCTAAATGATTTCGATGACTTAACGGAGAGTAATATGAGAAAAGACAGAATGGACGAAGAAACTCGAGTCGAGCTCAGTGAAGTGCAGACTAAAGTCAACGGCAAAGTGTATTTCACGTGTAAAATATGCGGAAAGAACCTGAGCTCGTCGCACACGTACATCTTCCACAAGCGCATCCACACCGGCGAGCGGCCCTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGGGTGCCCAACGGCCTGCAGCGGCACTTAACGGAAACACATTTGAAGCAACGGCGGTATATTTGCTTGGTCTGCCACAAGAATTTCGCCAATTCTCAGAACTTGAAACAGCATATGCGCATCCACACCGGCGAGAGACCCTACGTGTGCTCGCATTGCGGCAAACGGTTCACGCAGAGCGGGTCTCTACACGTACATTTAAAAACCCATACAGAAATCTTTCCTCACAACTGCGCGGATTGCGGCGCGAAGTTCAGGTTGCGGTCTAGTTTGAAACGACACAGATTAAAACACACGGGGGAGAGGCCACACGTGTGCGTTCATTGCGGGAAAGGGTTCCGACAGAAACATGAGCTCAACAGTCACATTCTGACCCACACGGACACCAAACCCCACGCCTGCTCGGTGTGCGGCGCCGCCTTCCGCCAGCGCCGCGCGCTGCGCCACCACTGCAAGCGCCTGCACGACGCCGACGCGACGGACGTCATCATCTATAACAACATGCCGCACTACGATAACGTGAAAAAAGAGATAAAATCCGAGACCGCACATAGTCAAAATTTAGTTGTTAAAAAAGATGAGTCTGTAACAAATCATAAAGAGAATATAGGAAAACCACAGACTATTGTAATAAAAGATGGCAAAAGATATGGAGTGTGTAATATTTGTAAAAAAAATGTGTTAACCGCCTCTTGGAAACGTCATCTACGGTCGCACCAGAGCGTCAAGAGGTTCAGCTGCCACACCTGCGGGCTCGGCTTCAACGACAGCGGCAACCTCTCGCGGCACACGAAAGCCGTACATTCCGAGCACCGCCCTCACGCTTGCCATATTTGTCATAAAAATTTCTCTAGAAACGGTCACCTTCAAGATCATATAAAATCACATTCGGATACTAGAGAGTACGTTTGCGACGTGTGCGGTAAAGCCTCCAAATCCAGCGCCGCTTTAAGAATGCACAGAGGAATACACGAGAACGACTATAGGTTTCAGTGCATGTACTGCGAGTCTAAATTCAAAAGGCGCGGGCAGCTGACGGCGCACGTGTCGGTGCACACCGGGGAGAAGGCGCACGTCTGCGTCTGCGGCAAGACCTTCCGGCTGAGGAGCCAGCTCACGAGCCACGCGCGCCTCCACGACGCAGTGTCGGGGTCGCGCACGGAGTTCGACACGCGCACGCAGGCTTTAGCTGACCCTGTCGCCGGGGCCGGTCAGGCCCAGAGTGGCTCACCACATCGACGAAATGATACAACTCGAAATAGCAGTTTCGATATCTATCAGCTTGGACCGTCTACTAGTGACGGTATCGTCCCTGTGAAAATTGAAAACATTGAAGATGAATATAACGAAAATGAGCCGGAGAACATGGACGGTTCTGATTCACAAAAGAATTTCAATCCACTCGAAGAAAGCGACGAGAAAACTTCGTCGTACCGTCAAGTGCGGCGCTTCCATGGAGCTCGAAAGTGTCGTTATGGCGACGACGTATACAAGTGCGCGATCATCTACTTCCACCGCGTGAGGTACGCGCACGACGAGTCGCATAAGGATTGCTCCACCCTGGTGTGCGACATCTGCGACAAAGAGTTCCACACCGGGGAGTGGTTCAAGGAGCACAACGCGAGGCAAAACCTCGAGTACCGCTGCTGCGAGTGCAGCAGGGTGTTCCTAACTAAGGAGAGCTTGTACCTGCACAGAGCCAGCCACAATGGCGACAAAAACTTTAAATGCAGCAAATGCTCCAAATCGTTCCGTTGGCGCATACACTTAGAAAAACACGAGAAAAAGCATATAATCAAGACTAAATACGCATGTCCGACTTGCCAACGTGTTTTTAGCCTCAAATGTGACATGTTGAAACACCGCCGCGTTCACAAGATAAAGAATTTTAAATGCACCAAGTGTGATTTACGATTCTCTGAAACTAGATATCTGAAGTTGCACATGACCAGGAAGCATTGCGACGACAACAAGAAGAAATCAGCACCGAAAATAATACAGGCTTCTAAAGGGAAACCTAAAATGCAAGTACAGGAACCCAAGAAACAATCCAAAAAAATATCCAAGAAGTAA
Protein Sequence
MKTAKQLLFTFKCLDIDEMDPLPKTVCYSCARLIVTWHKFANRSVEVEAKLKQRCNLQGQPMETNEQNATNLNENGNNQAVDTYTYTADSSIGTSPDPYSLYSIVKNVLTDDYFKTLDIDEDNSNLEYVCQICPGNPASKSVELLCSHIKSSHYSKTTDQQAIEDYIKENITFEEVLGDDMDDDHELEQVKDVIELPNFFCPFCDNAFSSPTRLICHLNKHIEVSIEDGITCCDKHYPDKKTFVAHLQEAHVNRQVTGKVICKSCDFTAKDVNELQSHIIQAHPESKDDCYKPKKDPSPKNQKFIPAVCPECDKVFSNKYNMLVHMRNHNKSTTKFACVKCSKSYKSQGSLSHHQKVAHEGLLRFPCAYCGEAFPSRMTRNIHTRIHTGCKPFSCKYCCKSFRAKNSLDRHIDMHLDIRKYACQFCPKKFRKRTHLNYHLKTHEDQSYGDACEEKNIWKIAESDSDSIASDDEPLASLANRKSTRDLYQDFYNALKKFRDHFVSDYRWQCNYSDFSDSTESDHEDLKEMDLNDFDDLTESNMRKDRMDEETRVELSEVQTKVNGKVYFTCKICGKNLSSSHTYIFHKRIHTGERPCVCHVCGKQFRVPNGLQRHLTETHLKQRRYICLVCHKNFANSQNLKQHMRIHTGERPYVCSHCGKRFTQSGSLHVHLKTHTEIFPHNCADCGAKFRLRSSLKRHRLKHTGERPHVCVHCGKGFRQKHELNSHILTHTDTKPHACSVCGAAFRQRRALRHHCKRLHDADATDVIIYNNMPHYDNVKKEIKSETAHSQNLVVKKDESVTNHKENIGKPQTIVIKDGKRYGVCNICKKNVLTASWKRHLRSHQSVKRFSCHTCGLGFNDSGNLSRHTKAVHSEHRPHACHICHKNFSRNGHLQDHIKSHSDTREYVCDVCGKASKSSAALRMHRGIHENDYRFQCMYCESKFKRRGQLTAHVSVHTGEKAHVCVCGKTFRLRSQLTSHARLHDAVSGSRTEFDTRTQALADPVAGAGQAQSGSPHRRNDTTRNSSFDIYQLGPSTSDGIVPVKIENIEDEYNENEPENMDGSDSQKNFNPLEESDEKTSSYRQVRRFHGARKCRYGDDVYKCAIIYFHRVRYAHDESHKDCSTLVCDICDKEFHTGEWFKEHNARQNLEYRCCECSRVFLTKESLYLHRASHNGDKNFKCSKCSKSFRWRIHLEKHEKKHIIKTKYACPTCQRVFSLKCDMLKHRRVHKIKNFKCTKCDLRFSETRYLKLHMTRKHCDDNKKKSAPKIIQASKGKPKMQVQEPKKQSKKISKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-