Basic Information

Gene Symbol
-
Assembly
GCA_905404265.1
Location
FR990006.1:6937025-6939364[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 6.4 1.1e+04 -2.8 0.0 22 33 228 239 226 249 0.83
2 5 2.2e-07 0.00037 21.1 0.0 1 45 259 305 259 306 0.93
3 5 2.3e-09 3.8e-06 27.4 0.3 3 42 314 357 312 360 0.93
4 5 1.4e-11 2.3e-08 34.5 0.0 1 43 365 407 365 409 0.97
5 5 3.2e-08 5.3e-05 23.8 0.0 3 45 417 461 415 462 0.94

Sequence Information

Coding Sequence
ATGAGTGATTTTGAAATGGAATCAGACAGTGACGAAGAAAATGAAATACAGGATTTAGAACAGCTTAACGCAGCGCTAATTGACGATGACCCTAGTCAATCCACTGCTTCTGTTTCCTGTGTCTCCACAGTTAGTTTTAGCTCGTTCAACTCTAAATATGAAGAATACTCGAAAATTGAGACCGTTCTGGCACTTAACAAAATGTGTGACGAGAAATTGCGGCGGCTGGAAAAAATTTTGCAATCCCGACTACAGGAATGTCGTCTGAAACTGAGTGAGATACAAGGTACAGAAAATAATAATGAAAGATATGATAAAACAGAGACATTCCGCTATGTAAGCTGTGGCAAGCCGTATTTTAAAGACAAAAGCAATTTTCCAGCTCCAGATAATGAAGATACTGTACTCATGACTAAATCACAGATGTATGACTTTTCTAACATAGTGTCTGTTCCCGGTTGGACAGTTAGAGATAAAAGTCAATTCTTGGCCATACTACAAAAAATGTCTCAAGAGAAGAGAAAAAAGGATATTGAATCAAAAATTGCTGAATTGAAACGTGAAGATAAAGTTAAACAAACAAAAAATAATGGAAAGAAAATAGCTGCATTGAGAAAAGAAATAGATAGAGTTAACAAAATGCAACTAAAAGATTTAGCATTACCAATAGAAGAGGAGTATGACTGGGATGTTGTTGCAAATAAATTAAGCCATAGACATAGTGCACTTGAATATAGATCACTTTGGAGACTATTTCTTCATCCTTCTATTAACAAGAATGTCTGGACTAAACCAGAGCATATGGCACTACAAAAAATTGCTTTTGATGAAAAATTACAAGACTGGGATAAAATAGCATCATTACTTGGCACTGGAAGAACAAACTATCAATGTTTTGTATACTTCAGAACAAATATGAGTAATACATTTACAGGCAGAAGATGGTCAAAAGAAGAAGAAGAATATCTTAAAAGACTAATAGAATATTACAAGGAAGATAATTATATTCCATGGGGTAAAGTTGCAGCTTCTATGGAAAATCGAACCAAAATACAAATTTATAATAAATATTCTAGACTTGAAGAGGTCAGAAAAGGTAGATTCTTAGCAGAAGAAGATGCTGTAATACTAACATGTGTTGATAATTTTGGATTAAATTTTAAGAAGATATCAAAATTTTTACCAGGTCGTTCTATAACACAGTGTCGTGTCCGTTATCAAGTTTTAGCCAAAAAGCGAATATCTACAGTATGGACAATAGAAGAAGATCGAAAATTAATTCAATTAATGGCAAATCAAGATTTATCTATCAACTACTCAAGTATAACTCAACATTTACCAGGAAAAGATCGGCAGCATATAAGGGCTAGGTATTTGACCTTGACAAAATGGATGAGAAGAAATCCAGATATAGATATTGCTAAAGCACCTAGACGTGGTGCCAGGCGCTTAGGCCATGGACACTCATCAGAAGATTTAAATAGAGCTATAGAAGGCTTGAAATCCAGAATACAATCTGAAGTAACTGATAAAAAACGTAAAAAAATAAATAAAGATTCTCCTGAAGATGCAATAGAAGATGCAATAATAGCTACACTCGTAACAGAAAATGTGAGATTAGAAGAAGCAAAAAGGGCCCAACCATATCCAGAAGAATCTGATGATGAAGAGAATAATTCCCAACACTGTAAACAAAGCTGTAACGTTCAAAATTTAAAAAAGCTTTTAATTTTATTAAAAGCCAAGTTAAACAAAAACAAATTTATGAAGAGTCAATATAGTAAAATGTATAAAGGGCTATTAGAACCAGAACAAGAAGTACTTACAGTAAAGGTTAAATCTTATTCAAAGCAGAGTGTGGAGAAAAATATAACTATTGATGGAACTCCTGATATTTGGGGAAATGTCAGCTTAGGTCCTTTAGCATATGTGCTTCCACCTCATTATTCTACAATTACAGGTTGTAGGAAATTAATGTCATACGTATCTTCAAAATCACAGACAGAAGATCCAGTAAACATCAATGTAGTGTTAAGAAGAAATGTCCTATTAAAAGAGGAGGCTTTTCTGTTAATGGAGAGATTCAATATTTTATTCCTATGGCCCATGCTCCTATCTAATGCAACAGCTGGGGAAACTATAACTGTAAATCAAGATAATCCTCCACAAGAAAGTTCTTTTAAAAAACAACCACAGTTTCATAAAGATGACTGGAATAAACTTGTAGTGCCAGGACATAAATTAAATGATCATGTAAATCAAGCTAGTGACTTAGAAGAGTCCGCGACAAAAGATGATAAAAATGTAGAAATAGAAACACTTAATTCCAATAATGTATAA
Protein Sequence
MSDFEMESDSDEENEIQDLEQLNAALIDDDPSQSTASVSCVSTVSFSSFNSKYEEYSKIETVLALNKMCDEKLRRLEKILQSRLQECRLKLSEIQGTENNNERYDKTETFRYVSCGKPYFKDKSNFPAPDNEDTVLMTKSQMYDFSNIVSVPGWTVRDKSQFLAILQKMSQEKRKKDIESKIAELKREDKVKQTKNNGKKIAALRKEIDRVNKMQLKDLALPIEEEYDWDVVANKLSHRHSALEYRSLWRLFLHPSINKNVWTKPEHMALQKIAFDEKLQDWDKIASLLGTGRTNYQCFVYFRTNMSNTFTGRRWSKEEEEYLKRLIEYYKEDNYIPWGKVAASMENRTKIQIYNKYSRLEEVRKGRFLAEEDAVILTCVDNFGLNFKKISKFLPGRSITQCRVRYQVLAKKRISTVWTIEEDRKLIQLMANQDLSINYSSITQHLPGKDRQHIRARYLTLTKWMRRNPDIDIAKAPRRGARRLGHGHSSEDLNRAIEGLKSRIQSEVTDKKRKKINKDSPEDAIEDAIIATLVTENVRLEEAKRAQPYPEESDDEENNSQHCKQSCNVQNLKKLLILLKAKLNKNKFMKSQYSKMYKGLLEPEQEVLTVKVKSYSKQSVEKNITIDGTPDIWGNVSLGPLAYVLPPHYSTITGCRKLMSYVSSKSQTEDPVNINVVLRRNVLLKEEAFLLMERFNILFLWPMLLSNATAGETITVNQDNPPQESSFKKQPQFHKDDWNKLVVPGHKLNDHVNQASDLEESATKDDKNVEIETLNSNNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00212404;
80% Identity
-