Fadi012319.1
Basic Information
- Insect
- Fabriciana adippe
- Gene Symbol
- -
- Assembly
- GCA_905404265.1
- Location
- FR989983.1:23375162-23375587[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-07 6.4e-05 23.1 0.0 3 39 22 58 20 63 0.87 2 2 4.7 1.8e+03 -0.7 0.0 2 10 67 75 67 77 0.88
Sequence Information
- Coding Sequence
- ATGGTGAAAACAAAAATCAAAAAAAGTAAAACAAAACGGAATTATACCGTTAACCATAGCGCCGAAATGCTTGCATTGGCGTTAGAAAACCTTAAGAGTAAACAAATCTCGTCATATCAAGCAGAGAAATTATACGGAATACCAAGAAGGACACTTCTTGATAAACTAAACGGAAAACATTCCAAGAGCGTAGGCTGTCCCACGAAACTTGAAGCTGCTGTTGAAGATAAAATAGTGAATTGCCTTATTACTACAGCTGAGTTCGGCAGCCCACTAACTCTGTTGGAACTCAGAATGCTAGTTTACAAATACCTAGAAAAGAACAATTATGTTGATATTTTTTTTTTCGTTTTGTACTGCCAATTTGAACTTTACGATTTAAAGAAGTATTTTTTAGCAATTAAGAATTTTACAAGTAATTATTAA
- Protein Sequence
- MVKTKIKKSKTKRNYTVNHSAEMLALALENLKSKQISSYQAEKLYGIPRRTLLDKLNGKHSKSVGCPTKLEAAVEDKIVNCLITTAEFGSPLTLLELRMLVYKYLEKNNYVDIFFFVLYCQFELYDLKKYFLAIKNFTSNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00722993;
- 90% Identity
- iTF_00722993;
- 80% Identity
- iTF_00722993;